Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30590
         (476 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.067
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    23   1.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.9  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   1.9  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    23   1.9  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   2.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   2.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   2.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   3.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.4  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   4.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   5.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   5.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   5.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   7.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 27.5 bits (58), Expect = 0.067
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 288  ERMIVSRYPLYITLFLVTTA 229
            +RM+V+RY  Y T+F + TA
Sbjct: 1209 QRMVVARYVYYATIFTIITA 1228


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +1

Query: 253 YVQRISAHNHSFHDAKILRKVQNGTVFSGIQQAEDMGKIMVEE 381
           Y+Q +        +A ILR V    + +G ++  D  K+ VE+
Sbjct: 43  YLQCLLKKGKCNEEAAILRDVIPDALITGCRKCNDHQKVSVEK 85


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 19/75 (25%), Positives = 35/75 (46%)
 Frame = +3

Query: 30  ILRLQRQKKVQTKKINHRACSIQYQTRATYKWF*IVIYITWCIRDEIQDIGGGNVSIIIR 209
           IL  QR    Q  +  H         +A   WF  +IY    IR+   D+   + ++ I 
Sbjct: 33  ILEAQRLLSEQNNQPVHDEHLFIVTHQAYELWFKQIIYELDSIRNIFSDVLEESQTLEIL 92

Query: 210 RELNVKLLLLPKIML 254
           + LN +++L+ K+++
Sbjct: 93  KRLN-RVVLILKVLV 106


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 19/75 (25%), Positives = 35/75 (46%)
 Frame = +3

Query: 30  ILRLQRQKKVQTKKINHRACSIQYQTRATYKWF*IVIYITWCIRDEIQDIGGGNVSIIIR 209
           IL  QR    Q  +  H         +A   WF  +IY    IR+   D+   + ++ I 
Sbjct: 33  ILEAQRLLSEQNNQPVHDEHLFIVTHQAYELWFKQIIYELDSIRNIFSDVLEESQTLEIL 92

Query: 210 RELNVKLLLLPKIML 254
           + LN +++L+ K+++
Sbjct: 93  KRLN-RVVLILKVLV 106


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +2

Query: 122 MVLNRYLYYLVYTGRNSGHRRWQCIDNHSKRTKCQAAVVTKNNVMYKGYRLTII 283
           MVLN +   + +T +    R+   +DN  K+  C   +   N+V+ K   L ++
Sbjct: 11  MVLNLFFSQMYFTKKLEQMRQVHEVDNQLKQMGCDLDI--PNSVVQKHLILLMV 62


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +1

Query: 253 YVQRISAHNHSFHDAKILRKVQNGTVFSGIQQAEDMGKIMVEE 381
           Y+Q +        +A ILR V    + +G ++  D  K+ VE+
Sbjct: 43  YLQCLLKKGKCNEEAAILRDVIPDALITGCRKCNDHQKVSVEK 85


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory
          receptor candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 73 IFFVCTFFCLCSLRIFR 23
          +F+VCTFF L    + R
Sbjct: 23 LFYVCTFFGLAPYSLVR 39


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 98  VSNQGNLQMVLNRYL 142
           +SN+ N  +VLN+YL
Sbjct: 22  LSNKNNTYLVLNKYL 36


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory
          receptor candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 73 IFFVCTFFCLCSLRIFR 23
          +F+VCTFF L    + R
Sbjct: 23 LFYVCTFFGLAPYSLVR 39


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 170 SGHRRWQCIDNHSKRTKCQAAVV 238
           S +R WQC   + +  +C A +V
Sbjct: 169 SCNRYWQCQGGYPRLQRCPAMLV 191


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 195 IHCHLRCPEFRPVYTK 148
           ++C   CP+ RP +T+
Sbjct: 728 LNCWKECPKNRPTFTE 743


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = +3

Query: 123 WF*IVIYITWCIRDEIQDIGGGNVSIIIRRELNVKLLLLPKIML 254
           WF  +IY    IR+   D+   + ++ I + LN +++L+ K+++
Sbjct: 4   WFKQIIYELDSIRNIFSDVLEESQTLEILKRLN-RVVLILKVLV 46


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
 Frame = +2

Query: 137 YLYYLVYTGRNSGHR---RWQCIDNHSKRTKCQAAV 235
           Y Y   Y  +   H     WQCI+   +R   + A+
Sbjct: 39  YTYRQPYPRQKKSHPPQWTWQCINQRCERRHIKGAI 74


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 390 ASSFFYHNFTHIFSLL 343
           A+ FF  N+T +FS+L
Sbjct: 624 AAGFFAINYTLVFSIL 639


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 3   WIKITVKRNILRLQRQKKVQTKKINHRACSIQYQTRATYKWF*IVIYITWC-IRDEIQDI 179
           + K+T K+  +    +  + T  +   AC +   T  T   F I+  + +C I   I  I
Sbjct: 169 YYKLTKKKLSVFFGNKPVILTVVLPLLACGVMVVTHITMAHFKIIQVVPYCYINCLIYLI 228

Query: 180 GG 185
           GG
Sbjct: 229 GG 230


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 390 ASSFFYHNFTHIFSLL 343
           A+ FF  N+T +FS+L
Sbjct: 349 AAGFFAINYTLVFSIL 364


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 292 RGTNDCEPISFVHNIIFGNNSS 227
           RG N+  P +  +N  F NNS+
Sbjct: 125 RGNNNNTPSATNNNTNFNNNSN 146


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 94  ILHARWLIFFVCTFFCLCSLRI 29
           I+    L+F +C ++  C+L I
Sbjct: 273 IIFTMHLLFLLCIYYFYCALII 294


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 188 QCIDNHSKRTKCQAAVVTK 244
           +C+ N   RT C+A  + K
Sbjct: 47  ECVINKKNRTACKACRLRK 65


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 292 RGTNDCEPISFVHNIIFGNNSS 227
           RG N+  P +  +N  F NNS+
Sbjct: 73  RGNNNNTPSATNNNTNFNNNSN 94


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 292 RGTNDCEPISFVHNIIFGNNSS 227
           RG N+  P +  +N  F NNS+
Sbjct: 256 RGNNNNTPSATNNNTNFNNNSN 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,163
Number of Sequences: 336
Number of extensions: 2359
Number of successful extensions: 26
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)