BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30590 (476 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 23 1.7 DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 3.9 DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 5.1 DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 5.1 AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 5.1 DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. 21 6.8 AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 6.8 >AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase protein. Length = 580 Score = 23.0 bits (47), Expect = 1.7 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +1 Query: 262 RISAHNHSFHDAKIL 306 RI A NH F DA++L Sbjct: 221 RIDAINHMFEDARLL 235 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 21.8 bits (44), Expect = 3.9 Identities = 10/30 (33%), Positives = 17/30 (56%) Frame = -2 Query: 250 IIFGNNSSLTFSSLRMIIDTLPPPMS*ISS 161 I+ G N+ LTF +L ++ P +S I + Sbjct: 264 IVLGTNTILTFMTLASKVENSLPKVSYIKA 293 >DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor protein. Length = 399 Score = 21.4 bits (43), Expect = 5.1 Identities = 8/22 (36%), Positives = 12/22 (54%) Frame = -1 Query: 371 IILPISSACCMPENTVPFCTFL 306 +I+P CC + V F T+L Sbjct: 348 VIVPFCPDCCPSDRMVYFITWL 369 >DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor protein. Length = 399 Score = 21.4 bits (43), Expect = 5.1 Identities = 8/22 (36%), Positives = 12/22 (54%) Frame = -1 Query: 371 IILPISSACCMPENTVPFCTFL 306 +I+P CC + V F T+L Sbjct: 348 VIVPFCPDCCPSDRMVYFITWL 369 >AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled receptor protein. Length = 399 Score = 21.4 bits (43), Expect = 5.1 Identities = 8/22 (36%), Positives = 12/22 (54%) Frame = -1 Query: 371 IILPISSACCMPENTVPFCTFL 306 +I+P CC + V F T+L Sbjct: 348 VIVPFCPDCCPSDRMVYFITWL 369 >DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. Length = 152 Score = 21.0 bits (42), Expect = 6.8 Identities = 7/15 (46%), Positives = 8/15 (53%) Frame = +2 Query: 188 QCIDNHSKRTKCQAA 232 QC+DN KC A Sbjct: 100 QCVDNAKNEDKCLTA 114 >AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor protein. Length = 501 Score = 21.0 bits (42), Expect = 6.8 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = -1 Query: 119 VSCPGLILNTACSVVDLFC 63 +SC ILN VD FC Sbjct: 123 LSCTASILNLCMISVDRFC 141 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 126,912 Number of Sequences: 438 Number of extensions: 2741 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 12928545 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -