Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30589
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   4.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   5.4  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   7.1  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/44 (20%), Positives = 18/44 (40%)
 Frame = -1

Query: 295 RPQHFYPYKTLLVSLSAEIIYCMLTGISFSFLPLNWIQHYHTKK 164
           RP    P   L++      +  ++ G+     P   + HY T++
Sbjct: 759 RPSFISPRSQLIICSGLVFVQILINGVWMIIDPAKAMHHYPTRE 802


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 559 IIGTNAQIGEKLYENTF 509
           +IG N  +  KLYE T+
Sbjct: 345 LIGRNPTVQNKLYEETY 361


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 421 NIKCLSTCKLHQCHVI 468
           N  C  TC L + H+I
Sbjct: 74  NYSCFITCALEKSHII 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,033
Number of Sequences: 438
Number of extensions: 4431
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)