Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30587
(765 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 127 5e-29
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 127 5e-29
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 127 5e-29
BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 127 5e-29
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 127 5e-29
BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/... 94 4e-19
BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein prot... 94 4e-19
AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 pro... 94 4e-19
AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/... 94 4e-19
AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. 94 4e-19
AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A (5... 94 6e-19
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 31 4.5
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 31 4.5
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 31 4.5
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 31 4.5
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 127 bits (306), Expect = 5e-29
Identities = 56/74 (75%), Positives = 66/74 (89%)
Frame = +3
Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 154 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 213
Query: 690 HLYTKCAEFIKDRR 731
Y + A+FI +RR
Sbjct: 214 ATYCRLAQFIGNRR 227
Score = 93.9 bits (223), Expect = 6e-19
Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +1
Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 57 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 111
Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
E L C G + EILRG+R HFH L+KGLT L AC AQL L
Sbjct: 112 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 154
Score = 66.9 bits (156), Expect = 7e-11
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +2
Query: 65 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 7 MVLLHVLFEHAVGYALVALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 66
Query: 245 LEN 253
LEN
Sbjct: 67 LEN 69
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 127 bits (306), Expect = 5e-29
Identities = 56/74 (75%), Positives = 66/74 (89%)
Frame = +3
Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 207
Query: 690 HLYTKCAEFIKDRR 731
Y + A+FI +RR
Sbjct: 208 ATYCRLAQFIGNRR 221
Score = 93.9 bits (223), Expect = 6e-19
Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +1
Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105
Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
E L C G + EILRG+R HFH L+KGLT L AC AQL L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +2
Query: 65 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 245 LEN 253
LEN
Sbjct: 61 LEN 63
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 127 bits (306), Expect = 5e-29
Identities = 56/74 (75%), Positives = 66/74 (89%)
Frame = +3
Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 207
Query: 690 HLYTKCAEFIKDRR 731
Y + A+FI +RR
Sbjct: 208 ATYCRLAQFIGNRR 221
Score = 93.9 bits (223), Expect = 6e-19
Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +1
Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105
Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
E L C G + EILRG+R HFH L+KGLT L AC AQL L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +2
Query: 65 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 245 LEN 253
LEN
Sbjct: 61 LEN 63
>BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for
IMAGE:4448930) protein.
Length = 447
Score = 127 bits (306), Expect = 5e-29
Identities = 56/74 (75%), Positives = 66/74 (89%)
Frame = +3
Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 144 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 203
Query: 690 HLYTKCAEFIKDRR 731
Y + A+FI +RR
Sbjct: 204 ATYCRLAQFIGNRR 217
Score = 93.9 bits (223), Expect = 6e-19
Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +1
Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 47 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 101
Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
E L C G + EILRG+R HFH L+KGLT L AC AQL L
Sbjct: 102 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 144
Score = 66.9 bits (156), Expect = 7e-11
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +2
Query: 77 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALEN 253
+VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VALEN
Sbjct: 1 HVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVALEN 59
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 127 bits (306), Expect = 5e-29
Identities = 56/74 (75%), Positives = 66/74 (89%)
Frame = +3
Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 207
Query: 690 HLYTKCAEFIKDRR 731
Y + A+FI +RR
Sbjct: 208 ATYCRLAQFIGNRR 221
Score = 93.9 bits (223), Expect = 6e-19
Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +1
Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105
Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
E L C G + EILRG+R HFH L+KGLT L AC AQL L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +2
Query: 65 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 245 LEN 253
LEN
Sbjct: 61 LEN 63
>BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 94.3 bits (224), Expect = 4e-19
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +3
Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680
CLG HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+
Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198
Query: 681 PENHLYTKCAEFIKDRRPCAKS 746
+N Y KC + + DR+ A +
Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220
Score = 46.8 bits (106), Expect = 8e-05
Identities = 29/86 (33%), Positives = 41/86 (47%)
Frame = +1
Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438
A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R
Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117
Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516
GIR LI G+ + + L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143
>BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein
protein.
Length = 522
Score = 94.3 bits (224), Expect = 4e-19
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +3
Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680
CLG HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+
Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198
Query: 681 PENHLYTKCAEFIKDRRPCAKS 746
+N Y KC + + DR+ A +
Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220
Score = 46.8 bits (106), Expect = 8e-05
Identities = 29/86 (33%), Positives = 41/86 (47%)
Frame = +1
Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438
A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R
Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117
Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516
GIR LI G+ + + L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143
>AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5
protein.
Length = 529
Score = 94.3 bits (224), Expect = 4e-19
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +3
Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680
CLG HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+
Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198
Query: 681 PENHLYTKCAEFIKDRRPCAKS 746
+N Y KC + + DR+ A +
Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220
Score = 46.8 bits (106), Expect = 8e-05
Identities = 29/86 (33%), Positives = 41/86 (47%)
Frame = +1
Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438
A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R
Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117
Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516
GIR LI G+ + + L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143
>AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 94.3 bits (224), Expect = 4e-19
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +3
Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680
CLG HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+
Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198
Query: 681 PENHLYTKCAEFIKDRRPCAKS 746
+N Y KC + + DR+ A +
Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220
Score = 46.8 bits (106), Expect = 8e-05
Identities = 29/86 (33%), Positives = 41/86 (47%)
Frame = +1
Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438
A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R
Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117
Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516
GIR LI G+ + + L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143
>AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein.
Length = 529
Score = 94.3 bits (224), Expect = 4e-19
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +3
Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680
CLG HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+
Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198
Query: 681 PENHLYTKCAEFIKDRRPCAKS 746
+N Y KC + + DR+ A +
Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220
Score = 46.8 bits (106), Expect = 8e-05
Identities = 29/86 (33%), Positives = 41/86 (47%)
Frame = +1
Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438
A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R
Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117
Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516
GIR LI G+ + + L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143
>AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 281
Score = 93.9 bits (223), Expect = 6e-19
Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +1
Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105
Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
E L C G + EILRG+R HFH L+KGLT L AC AQL L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 93.9 bits (223), Expect = 6e-19
Identities = 54/103 (52%), Positives = 66/103 (64%), Gaps = 29/103 (28%)
Frame = +3
Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIRE-----------WY--- 647
LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+R+ W+
Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVRQSRCGEGKAVALWFLMK 207
Query: 648 ---------------SYHFPELVSIVPENHLYTKCAEFIKDRR 731
YHFPELV I+ +N Y + A+FI +RR
Sbjct: 208 QLGQGVTVALCREWYGYHFPELVKIINDNATYCRLAQFIGNRR 250
Score = 67.3 bits (157), Expect = 6e-11
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +2
Query: 65 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 245 LEN 253
LEN
Sbjct: 61 LEN 63
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 12 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,606,985
Number of Sequences: 237096
Number of extensions: 2480065
Number of successful extensions: 5897
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5890
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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