BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30587 (765 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 127 5e-29 BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 127 5e-29 BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 127 5e-29 BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 127 5e-29 AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 127 5e-29 BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/... 94 4e-19 BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein prot... 94 4e-19 AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 pro... 94 4e-19 AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/... 94 4e-19 AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. 94 4e-19 AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A (5... 94 6e-19 BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 31 4.5 AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 31 4.5 AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 31 4.5 AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 31 4.5 >Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. Length = 602 Score = 127 bits (306), Expect = 5e-29 Identities = 56/74 (75%), Positives = 66/74 (89%) Frame = +3 Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689 LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N Sbjct: 154 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 213 Query: 690 HLYTKCAEFIKDRR 731 Y + A+FI +RR Sbjct: 214 ATYCRLAQFIGNRR 227 Score = 93.9 bits (223), Expect = 6e-19 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +1 Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384 F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI Sbjct: 57 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 111 Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513 E L C G + EILRG+R HFH L+KGLT L AC AQL L Sbjct: 112 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 154 Score = 66.9 bits (156), Expect = 7e-11 Identities = 32/63 (50%), Positives = 45/63 (71%) Frame = +2 Query: 65 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244 M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA Sbjct: 7 MVLLHVLFEHAVGYALVALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 66 Query: 245 LEN 253 LEN Sbjct: 67 LEN 69 >BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A protein. Length = 594 Score = 127 bits (306), Expect = 5e-29 Identities = 56/74 (75%), Positives = 66/74 (89%) Frame = +3 Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689 LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 207 Query: 690 HLYTKCAEFIKDRR 731 Y + A+FI +RR Sbjct: 208 ATYCRLAQFIGNRR 221 Score = 93.9 bits (223), Expect = 6e-19 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +1 Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384 F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105 Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513 E L C G + EILRG+R HFH L+KGLT L AC AQL L Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148 Score = 67.3 bits (157), Expect = 6e-11 Identities = 32/63 (50%), Positives = 45/63 (71%) Frame = +2 Query: 65 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244 M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60 Query: 245 LEN 253 LEN Sbjct: 61 LEN 63 >BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (56kDa with KKE/D repeat) protein. Length = 594 Score = 127 bits (306), Expect = 5e-29 Identities = 56/74 (75%), Positives = 66/74 (89%) Frame = +3 Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689 LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 207 Query: 690 HLYTKCAEFIKDRR 731 Y + A+FI +RR Sbjct: 208 ATYCRLAQFIGNRR 221 Score = 93.9 bits (223), Expect = 6e-19 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +1 Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384 F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105 Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513 E L C G + EILRG+R HFH L+KGLT L AC AQL L Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148 Score = 67.3 bits (157), Expect = 6e-11 Identities = 32/63 (50%), Positives = 45/63 (71%) Frame = +2 Query: 65 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244 M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60 Query: 245 LEN 253 LEN Sbjct: 61 LEN 63 >BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IMAGE:4448930) protein. Length = 447 Score = 127 bits (306), Expect = 5e-29 Identities = 56/74 (75%), Positives = 66/74 (89%) Frame = +3 Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689 LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N Sbjct: 144 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 203 Query: 690 HLYTKCAEFIKDRR 731 Y + A+FI +RR Sbjct: 204 ATYCRLAQFIGNRR 217 Score = 93.9 bits (223), Expect = 6e-19 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +1 Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384 F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI Sbjct: 47 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 101 Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513 E L C G + EILRG+R HFH L+KGLT L AC AQL L Sbjct: 102 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 144 Score = 66.9 bits (156), Expect = 7e-11 Identities = 31/59 (52%), Positives = 44/59 (74%) Frame = +2 Query: 77 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALEN 253 +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VALEN Sbjct: 1 HVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVALEN 59 >AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (56kDa with KKE/D repeat) protein. Length = 594 Score = 127 bits (306), Expect = 5e-29 Identities = 56/74 (75%), Positives = 66/74 (89%) Frame = +3 Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689 LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 207 Query: 690 HLYTKCAEFIKDRR 731 Y + A+FI +RR Sbjct: 208 ATYCRLAQFIGNRR 221 Score = 93.9 bits (223), Expect = 6e-19 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +1 Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384 F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105 Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513 E L C G + EILRG+R HFH L+KGLT L AC AQL L Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148 Score = 67.3 bits (157), Expect = 6e-11 Identities = 32/63 (50%), Positives = 45/63 (71%) Frame = +2 Query: 65 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244 M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60 Query: 245 LEN 253 LEN Sbjct: 61 LEN 63 >BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/NOP58 protein. Length = 529 Score = 94.3 bits (224), Expect = 4e-19 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%) Frame = +3 Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680 CLG HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+ Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198 Query: 681 PENHLYTKCAEFIKDRRPCAKS 746 +N Y KC + + DR+ A + Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220 Score = 46.8 bits (106), Expect = 8e-05 Identities = 29/86 (33%), Positives = 41/86 (47%) Frame = +1 Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438 A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117 Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516 GIR LI G+ + + L LA Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143 >BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein protein. Length = 522 Score = 94.3 bits (224), Expect = 4e-19 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%) Frame = +3 Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680 CLG HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+ Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198 Query: 681 PENHLYTKCAEFIKDRRPCAKS 746 +N Y KC + + DR+ A + Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220 Score = 46.8 bits (106), Expect = 8e-05 Identities = 29/86 (33%), Positives = 41/86 (47%) Frame = +1 Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438 A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117 Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516 GIR LI G+ + + L LA Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143 >AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 protein. Length = 529 Score = 94.3 bits (224), Expect = 4e-19 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%) Frame = +3 Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680 CLG HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+ Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198 Query: 681 PENHLYTKCAEFIKDRRPCAKS 746 +N Y KC + + DR+ A + Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220 Score = 46.8 bits (106), Expect = 8e-05 Identities = 29/86 (33%), Positives = 41/86 (47%) Frame = +1 Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438 A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117 Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516 GIR LI G+ + + L LA Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143 >AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/NOP58 protein. Length = 529 Score = 94.3 bits (224), Expect = 4e-19 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%) Frame = +3 Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680 CLG HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+ Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198 Query: 681 PENHLYTKCAEFIKDRRPCAKS 746 +N Y KC + + DR+ A + Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220 Score = 46.8 bits (106), Expect = 8e-05 Identities = 29/86 (33%), Positives = 41/86 (47%) Frame = +1 Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438 A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117 Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516 GIR LI G+ + + L LA Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143 >AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. Length = 529 Score = 94.3 bits (224), Expect = 4e-19 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%) Frame = +3 Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680 CLG HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+ Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198 Query: 681 PENHLYTKCAEFIKDRRPCAKS 746 +N Y KC + + DR+ A + Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220 Score = 46.8 bits (106), Expect = 8e-05 Identities = 29/86 (33%), Positives = 41/86 (47%) Frame = +1 Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438 A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117 Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516 GIR LI G+ + + L LA Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143 >AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A (56kDa with KKE/D repeat) protein. Length = 281 Score = 93.9 bits (223), Expect = 6e-19 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Frame = +1 Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384 F F+++QV NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105 Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513 E L C G + EILRG+R HFH L+KGLT L AC AQL L Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148 Score = 93.9 bits (223), Expect = 6e-19 Identities = 54/103 (52%), Positives = 66/103 (64%), Gaps = 29/103 (28%) Frame = +3 Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIRE-----------WY--- 647 LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+R+ W+ Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVRQSRCGEGKAVALWFLMK 207 Query: 648 ---------------SYHFPELVSIVPENHLYTKCAEFIKDRR 731 YHFPELV I+ +N Y + A+FI +RR Sbjct: 208 QLGQGVTVALCREWYGYHFPELVKIINDNATYCRLAQFIGNRR 250 Score = 67.3 bits (157), Expect = 6e-11 Identities = 32/63 (50%), Positives = 45/63 (71%) Frame = +2 Query: 65 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244 M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60 Query: 245 LEN 253 LEN Sbjct: 61 LEN 63 >BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae) protein. Length = 499 Score = 31.1 bits (67), Expect = 4.5 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = +3 Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683 +I+ + L +++ ++N IR+ YS FPEL S+VP Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130 >AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61 kDa protein protein. Length = 499 Score = 31.1 bits (67), Expect = 4.5 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = +3 Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683 +I+ + L +++ ++N IR+ YS FPEL S+VP Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130 >AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens cDNA FLJ25681 fis, clone TST04131. ). Length = 364 Score = 31.1 bits (67), Expect = 4.5 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = +3 Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683 +I+ + L +++ ++N IR+ YS FPEL S+VP Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130 >AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined breast cancer antigen NY-BR-99 protein. Length = 278 Score = 31.1 bits (67), Expect = 4.5 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = +3 Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683 +I+ + L +++ ++N IR+ YS FPEL S+VP Sbjct: 12 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 50 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 110,606,985 Number of Sequences: 237096 Number of extensions: 2480065 Number of successful extensions: 5897 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 5642 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5890 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9199990470 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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