SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30587
         (765 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y12065-1|CAA72789.1|  602|Homo sapiens hNop56 protein.                127   5e-29
BC104793-1|AAI04794.1|  594|Homo sapiens nucleolar protein 5A pr...   127   5e-29
BC104791-1|AAI04792.1|  594|Homo sapiens nucleolar protein 5A (5...   127   5e-29
BC018421-1|AAH18421.1|  447|Homo sapiens Unknown (protein for IM...   127   5e-29
AL049712-4|CAC01444.2|  594|Homo sapiens nucleolar protein 5A (5...   127   5e-29
BC032592-1|AAH32592.1|  529|Homo sapiens nucleolar protein NOP5/...    94   4e-19
BC009306-1|AAH09306.1|  522|Homo sapiens NOP5/NOP58 protein prot...    94   4e-19
AF263608-1|AAF91394.1|  529|Homo sapiens nucleolar protein 5 pro...    94   4e-19
AF123534-1|AAD27610.1|  529|Homo sapiens nucleolar protein NOP5/...    94   4e-19
AC064836-1|AAY24145.1|  529|Homo sapiens unknown protein.              94   4e-19
AL049712-5|CAI22418.1|  281|Homo sapiens nucleolar protein 5A (5...    94   6e-19
BC117389-1|AAI17390.1|  499|Homo sapiens PRP31 pre-mRNA processi...    31   4.5  
AY040822-1|AAK77986.1|  499|Homo sapiens U4/U6 snRNP-associated ...    31   4.5  
AK098547-1|BAC05329.1|  364|Homo sapiens protein ( Homo sapiens ...    31   4.5  
AF308303-1|AAG48270.1|  278|Homo sapiens serologically defined b...    31   4.5  

>Y12065-1|CAA72789.1|  602|Homo sapiens hNop56 protein.
          Length = 602

 Score =  127 bits (306), Expect = 5e-29
 Identities = 56/74 (75%), Positives = 66/74 (89%)
 Frame = +3

Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
           LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 154 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 213

Query: 690 HLYTKCAEFIKDRR 731
             Y + A+FI +RR
Sbjct: 214 ATYCRLAQFIGNRR 227



 Score = 93.9 bits (223), Expect = 6e-19
 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
 Frame = +1

Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
           F  F+++QV        NAVSEG++ EDL L LE  LP +KK  K  LGV DPK+GAAI 
Sbjct: 57  FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 111

Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
           E L   C   G + EILRG+R HFH L+KGLT L AC  AQL L
Sbjct: 112 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 154



 Score = 66.9 bits (156), Expect = 7e-11
 Identities = 32/63 (50%), Positives = 45/63 (71%)
 Frame = +2

Query: 65  MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244
           M   +VLFEH+ G+AL  + E EE++   PQVEESV +L +F+++V L+AF P  S+ VA
Sbjct: 7   MVLLHVLFEHAVGYALVALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 66

Query: 245 LEN 253
           LEN
Sbjct: 67  LEN 69


>BC104793-1|AAI04794.1|  594|Homo sapiens nucleolar protein 5A
           protein.
          Length = 594

 Score =  127 bits (306), Expect = 5e-29
 Identities = 56/74 (75%), Positives = 66/74 (89%)
 Frame = +3

Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
           LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 207

Query: 690 HLYTKCAEFIKDRR 731
             Y + A+FI +RR
Sbjct: 208 ATYCRLAQFIGNRR 221



 Score = 93.9 bits (223), Expect = 6e-19
 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
 Frame = +1

Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
           F  F+++QV        NAVSEG++ EDL L LE  LP +KK  K  LGV DPK+GAAI 
Sbjct: 51  FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105

Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
           E L   C   G + EILRG+R HFH L+KGLT L AC  AQL L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148



 Score = 67.3 bits (157), Expect = 6e-11
 Identities = 32/63 (50%), Positives = 45/63 (71%)
 Frame = +2

Query: 65  MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244
           M   +VLFEH+ G+AL  + E EE++   PQVEESV +L +F+++V L+AF P  S+ VA
Sbjct: 1   MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60

Query: 245 LEN 253
           LEN
Sbjct: 61  LEN 63


>BC104791-1|AAI04792.1|  594|Homo sapiens nucleolar protein 5A
           (56kDa with KKE/D repeat) protein.
          Length = 594

 Score =  127 bits (306), Expect = 5e-29
 Identities = 56/74 (75%), Positives = 66/74 (89%)
 Frame = +3

Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
           LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 207

Query: 690 HLYTKCAEFIKDRR 731
             Y + A+FI +RR
Sbjct: 208 ATYCRLAQFIGNRR 221



 Score = 93.9 bits (223), Expect = 6e-19
 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
 Frame = +1

Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
           F  F+++QV        NAVSEG++ EDL L LE  LP +KK  K  LGV DPK+GAAI 
Sbjct: 51  FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105

Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
           E L   C   G + EILRG+R HFH L+KGLT L AC  AQL L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148



 Score = 67.3 bits (157), Expect = 6e-11
 Identities = 32/63 (50%), Positives = 45/63 (71%)
 Frame = +2

Query: 65  MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244
           M   +VLFEH+ G+AL  + E EE++   PQVEESV +L +F+++V L+AF P  S+ VA
Sbjct: 1   MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60

Query: 245 LEN 253
           LEN
Sbjct: 61  LEN 63


>BC018421-1|AAH18421.1|  447|Homo sapiens Unknown (protein for
           IMAGE:4448930) protein.
          Length = 447

 Score =  127 bits (306), Expect = 5e-29
 Identities = 56/74 (75%), Positives = 66/74 (89%)
 Frame = +3

Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
           LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 144 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 203

Query: 690 HLYTKCAEFIKDRR 731
             Y + A+FI +RR
Sbjct: 204 ATYCRLAQFIGNRR 217



 Score = 93.9 bits (223), Expect = 6e-19
 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
 Frame = +1

Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
           F  F+++QV        NAVSEG++ EDL L LE  LP +KK  K  LGV DPK+GAAI 
Sbjct: 47  FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 101

Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
           E L   C   G + EILRG+R HFH L+KGLT L AC  AQL L
Sbjct: 102 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 144



 Score = 66.9 bits (156), Expect = 7e-11
 Identities = 31/59 (52%), Positives = 44/59 (74%)
 Frame = +2

Query: 77  YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALEN 253
           +VLFEH+ G+AL  + E EE++   PQVEESV +L +F+++V L+AF P  S+ VALEN
Sbjct: 1   HVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVALEN 59


>AL049712-4|CAC01444.2|  594|Homo sapiens nucleolar protein 5A
           (56kDa with KKE/D repeat) protein.
          Length = 594

 Score =  127 bits (306), Expect = 5e-29
 Identities = 56/74 (75%), Positives = 66/74 (89%)
 Frame = +3

Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
           LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDN 207

Query: 690 HLYTKCAEFIKDRR 731
             Y + A+FI +RR
Sbjct: 208 ATYCRLAQFIGNRR 221



 Score = 93.9 bits (223), Expect = 6e-19
 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
 Frame = +1

Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
           F  F+++QV        NAVSEG++ EDL L LE  LP +KK  K  LGV DPK+GAAI 
Sbjct: 51  FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105

Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
           E L   C   G + EILRG+R HFH L+KGLT L AC  AQL L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148



 Score = 67.3 bits (157), Expect = 6e-11
 Identities = 32/63 (50%), Positives = 45/63 (71%)
 Frame = +2

Query: 65  MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244
           M   +VLFEH+ G+AL  + E EE++   PQVEESV +L +F+++V L+AF P  S+ VA
Sbjct: 1   MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60

Query: 245 LEN 253
           LEN
Sbjct: 61  LEN 63


>BC032592-1|AAH32592.1|  529|Homo sapiens nucleolar protein
           NOP5/NOP58 protein.
          Length = 529

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
 Frame = +3

Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680
           CLG  HS SR R+KF+  +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL  I+
Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198

Query: 681 PENHLYTKCAEFIKDRRPCAKS 746
            +N  Y KC + + DR+  A +
Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220



 Score = 46.8 bits (106), Expect = 8e-05
 Identities = 29/86 (33%), Positives = 41/86 (47%)
 Frame = +1

Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438
           A    ++   +N  L+  L K  K +   L V D KLG  I E L + C H+  V E++R
Sbjct: 58  AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117

Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516
           GIR     LI G+  +  +   L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143


>BC009306-1|AAH09306.1|  522|Homo sapiens NOP5/NOP58 protein
           protein.
          Length = 522

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
 Frame = +3

Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680
           CLG  HS SR R+KF+  +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL  I+
Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198

Query: 681 PENHLYTKCAEFIKDRRPCAKS 746
            +N  Y KC + + DR+  A +
Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220



 Score = 46.8 bits (106), Expect = 8e-05
 Identities = 29/86 (33%), Positives = 41/86 (47%)
 Frame = +1

Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438
           A    ++   +N  L+  L K  K +   L V D KLG  I E L + C H+  V E++R
Sbjct: 58  AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117

Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516
           GIR     LI G+  +  +   L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143


>AF263608-1|AAF91394.1|  529|Homo sapiens nucleolar protein 5
           protein.
          Length = 529

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
 Frame = +3

Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680
           CLG  HS SR R+KF+  +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL  I+
Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198

Query: 681 PENHLYTKCAEFIKDRRPCAKS 746
            +N  Y KC + + DR+  A +
Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220



 Score = 46.8 bits (106), Expect = 8e-05
 Identities = 29/86 (33%), Positives = 41/86 (47%)
 Frame = +1

Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438
           A    ++   +N  L+  L K  K +   L V D KLG  I E L + C H+  V E++R
Sbjct: 58  AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117

Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516
           GIR     LI G+  +  +   L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143


>AF123534-1|AAD27610.1|  529|Homo sapiens nucleolar protein
           NOP5/NOP58 protein.
          Length = 529

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
 Frame = +3

Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680
           CLG  HS SR R+KF+  +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL  I+
Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198

Query: 681 PENHLYTKCAEFIKDRRPCAKS 746
            +N  Y KC + + DR+  A +
Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220



 Score = 46.8 bits (106), Expect = 8e-05
 Identities = 29/86 (33%), Positives = 41/86 (47%)
 Frame = +1

Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438
           A    ++   +N  L+  L K  K +   L V D KLG  I E L + C H+  V E++R
Sbjct: 58  AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117

Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516
           GIR     LI G+  +  +   L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143


>AC064836-1|AAY24145.1|  529|Homo sapiens unknown protein.
          Length = 529

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
 Frame = +3

Query: 507 CLG--HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIV 680
           CLG  HS SR R+KF+  +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL  I+
Sbjct: 139 CLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKII 198

Query: 681 PENHLYTKCAEFIKDRRPCAKS 746
            +N  Y KC + + DR+  A +
Sbjct: 199 SDNLTYCKCLQKVGDRKNYASA 220



 Score = 46.8 bits (106), Expect = 8e-05
 Identities = 29/86 (33%), Positives = 41/86 (47%)
 Frame = +1

Query: 259 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 438
           A    ++   +N  L+  L K  K +   L V D KLG  I E L + C H+  V E++R
Sbjct: 58  AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117

Query: 439 GIRYHFHLLIKGLTLKACSVAQLALA 516
           GIR     LI G+  +  +   L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143


>AL049712-5|CAI22418.1|  281|Homo sapiens nucleolar protein 5A
           (56kDa with KKE/D repeat) protein.
          Length = 281

 Score = 93.9 bits (223), Expect = 6e-19
 Identities = 56/104 (53%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
 Frame = +1

Query: 205 FNSFSTTQVGDRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 384
           F  F+++QV        NAVSEG++ EDL L LE  LP +KK  K  LGV DPK+GAAI 
Sbjct: 51  FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105

Query: 385 EALEIQCTHTGAVPEILRGIRYHFHLLIKGLT-LKACSVAQLAL 513
           E L   C   G + EILRG+R HFH L+KGLT L AC  AQL L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148



 Score = 93.9 bits (223), Expect = 6e-19
 Identities = 54/103 (52%), Positives = 66/103 (64%), Gaps = 29/103 (28%)
 Frame = +3

Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIRE-----------WY--- 647
           LGHSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+R+           W+   
Sbjct: 148 LGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVRQSRCGEGKAVALWFLMK 207

Query: 648 ---------------SYHFPELVSIVPENHLYTKCAEFIKDRR 731
                           YHFPELV I+ +N  Y + A+FI +RR
Sbjct: 208 QLGQGVTVALCREWYGYHFPELVKIINDNATYCRLAQFIGNRR 250



 Score = 67.3 bits (157), Expect = 6e-11
 Identities = 32/63 (50%), Positives = 45/63 (71%)
 Frame = +2

Query: 65  MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 244
           M   +VLFEH+ G+AL  + E EE++   PQVEESV +L +F+++V L+AF P  S+ VA
Sbjct: 1   MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60

Query: 245 LEN 253
           LEN
Sbjct: 61  LEN 63


>BC117389-1|AAI17390.1|  499|Homo sapiens PRP31 pre-mRNA processing
           factor 31 homolog (S. cerevisiae) protein.
          Length = 499

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683
           +I+ +  L  +++ ++N     IR+ YS  FPEL S+VP
Sbjct: 92  VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130


>AY040822-1|AAK77986.1|  499|Homo sapiens U4/U6 snRNP-associated 61
           kDa protein protein.
          Length = 499

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683
           +I+ +  L  +++ ++N     IR+ YS  FPEL S+VP
Sbjct: 92  VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130


>AK098547-1|BAC05329.1|  364|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25681 fis, clone TST04131. ).
          Length = 364

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683
           +I+ +  L  +++ ++N     IR+ YS  FPEL S+VP
Sbjct: 92  VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130


>AF308303-1|AAG48270.1|  278|Homo sapiens serologically defined
           breast cancer antigen NY-BR-99 protein.
          Length = 278

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 683
           +I+ +  L  +++ ++N     IR+ YS  FPEL S+VP
Sbjct: 12  VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,606,985
Number of Sequences: 237096
Number of extensions: 2480065
Number of successful extensions: 5897
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5890
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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