BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30587 (765 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z71181-4|CAA94897.1| 486|Caenorhabditis elegans Hypothetical pr... 120 1e-27 AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical ... 86 3e-17 AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 30 2.1 AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical ... 28 6.3 Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 28 8.4 >Z71181-4|CAA94897.1| 486|Caenorhabditis elegans Hypothetical protein K07C5.4 protein. Length = 486 Score = 120 bits (288), Expect = 1e-27 Identities = 52/79 (65%), Positives = 65/79 (82%) Frame = +3 Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689 LGHSYSR++VKF+VHRVDNM+IQSIALLDQLDKD+N F MRIREWYSYH+PEL + P+ Sbjct: 151 LGHSYSRSKVKFDVHRVDNMVIQSIALLDQLDKDINLFGMRIREWYSYHYPELFRLAPDQ 210 Query: 690 HLYTKCAEFIKDRRPCAKS 746 + Y++ A I DR A++ Sbjct: 211 YKYSRLAVAILDRNKMAEN 229 Score = 67.3 bits (157), Expect = 1e-11 Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 2/105 (1%) Frame = +1 Query: 205 FNSFSTTQVG-DRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAI 381 F+ F T+ + C N++SEG+ DL FL+ LPK+KK LG+ D KL ++ Sbjct: 53 FDPFKNTEAALENC----NSISEGLAHPDLTNFLQKSLPKKKKH--VVLGINDSKLAGSL 106 Query: 382 SEAL-EIQCTHTGAVPEILRGIRYHFHLLIKGLTLKACSVAQLAL 513 +EA +++ G + EILRG R HF L K L + S AQL+L Sbjct: 107 TEAFPDLKLVFGGVITEILRGTRVHFERLAKNLPHHSLSKAQLSL 151 Score = 55.2 bits (127), Expect = 5e-08 Identities = 23/59 (38%), Positives = 39/59 (66%) Frame = +2 Query: 77 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALEN 253 +VL+EH+AG+AL ++ EF++ L +V+ + D +F+ +V L +F P K+ ALEN Sbjct: 7 FVLYEHAAGYALMKIKEFDDAGLILQEVDAAHADGYKFSQIVELASFDPFKNTEAALEN 65 >AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical protein W01B11.3 protein. Length = 487 Score = 85.8 bits (203), Expect = 3e-17 Identities = 34/76 (44%), Positives = 53/76 (69%) Frame = +3 Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689 + HS +R +VKFN ++D MI+Q+++LLD LDK++N + MR+REWY +HFPEL + ++ Sbjct: 140 VAHSLARYKVKFNPEKIDTMIVQAVSLLDDLDKELNNYVMRVREWYGWHFPELGKTIQDH 199 Query: 690 HLYTKCAEFIKDRRPC 737 Y K + I R+ C Sbjct: 200 QAYAKIIKAIGMRQNC 215 Score = 43.6 bits (98), Expect = 2e-04 Identities = 23/69 (33%), Positives = 37/69 (53%) Frame = +1 Query: 262 VSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRG 441 ++EG L + L L+ + + +K L V D KLG I E L + C H ++ E++RG Sbjct: 63 ITEGKLSKTLKKLLKSSVDETEK-----LAVGDAKLGNLIKEKLSLNCVHDSSINELMRG 117 Query: 442 IRYHFHLLI 468 +R H L+ Sbjct: 118 VRAHIEDLL 126 Score = 29.9 bits (64), Expect = 2.1 Identities = 16/60 (26%), Positives = 36/60 (60%) Frame = +2 Query: 80 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENTT 259 VLFE +AG+A+F+++ ++L + + E + ++ + L++F+ K+ A+E T+ Sbjct: 3 VLFEVAAGYAVFKLSNEKKLKN-VDNIWEEFSTAEKAQENLQLVSFKKFKTTAGAVEATS 61 >AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical protein Y110A7A.8 protein. Length = 504 Score = 29.9 bits (64), Expect = 2.1 Identities = 12/51 (23%), Positives = 25/51 (49%) Frame = +3 Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYTKCAEFI 719 +I++ + +D ++N +R+ Y FPEL ++VP Y + + Sbjct: 101 LIVKLSHVAADIDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLL 151 >AL021175-7|CAE54921.1| 329|Caenorhabditis elegans Hypothetical protein Y6E2A.9a protein. Length = 329 Score = 28.3 bits (60), Expect = 6.3 Identities = 19/69 (27%), Positives = 30/69 (43%) Frame = +1 Query: 310 GLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHLLIKGLTLKA 489 GL K S G L P + A++ A+ I + E + HL+ K L A Sbjct: 167 GLNMMVKNSHGLAGRLVPFVAVAVANAINIPMVRANELSEGIELCDEDDHLVAKSKQLAA 226 Query: 490 CSVAQLALA 516 ++AQ+ L+ Sbjct: 227 LAIAQVTLS 235 >Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical protein F07H5.8 protein. Length = 872 Score = 27.9 bits (59), Expect = 8.4 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = +2 Query: 446 VITSTCSSKVLPSKRAVWHSLPWPLILTSSCQVQCSPS 559 V S C P A++ + P PL S CQ C PS Sbjct: 389 VCISICQPACDPGCVAIYTTTPAPLHCVSQCQPACLPS 426 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,700,950 Number of Sequences: 27780 Number of extensions: 384669 Number of successful extensions: 958 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 904 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 956 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1830096852 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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