Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30587
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical pr...   120   1e-27
AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical ...    86   3e-17
AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical...    30   2.1  
AL021175-7|CAE54921.1|  329|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z71181-4|CAA94897.1|  486|Caenorhabditis elegans Hypothetical
           protein K07C5.4 protein.
          Length = 486

 Score =  120 bits (288), Expect = 1e-27
 Identities = 52/79 (65%), Positives = 65/79 (82%)
 Frame = +3

Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
           LGHSYSR++VKF+VHRVDNM+IQSIALLDQLDKD+N F MRIREWYSYH+PEL  + P+ 
Sbjct: 151 LGHSYSRSKVKFDVHRVDNMVIQSIALLDQLDKDINLFGMRIREWYSYHYPELFRLAPDQ 210

Query: 690 HLYTKCAEFIKDRRPCAKS 746
           + Y++ A  I DR   A++
Sbjct: 211 YKYSRLAVAILDRNKMAEN 229



 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
 Frame = +1

Query: 205 FNSFSTTQVG-DRCFGKYNAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAI 381
           F+ F  T+   + C    N++SEG+   DL  FL+  LPK+KK     LG+ D KL  ++
Sbjct: 53  FDPFKNTEAALENC----NSISEGLAHPDLTNFLQKSLPKKKKH--VVLGINDSKLAGSL 106

Query: 382 SEAL-EIQCTHTGAVPEILRGIRYHFHLLIKGLTLKACSVAQLAL 513
           +EA  +++    G + EILRG R HF  L K L   + S AQL+L
Sbjct: 107 TEAFPDLKLVFGGVITEILRGTRVHFERLAKNLPHHSLSKAQLSL 151



 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 23/59 (38%), Positives = 39/59 (66%)
 Frame = +2

Query: 77  YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALEN 253
           +VL+EH+AG+AL ++ EF++    L +V+ +  D  +F+ +V L +F P K+   ALEN
Sbjct: 7   FVLYEHAAGYALMKIKEFDDAGLILQEVDAAHADGYKFSQIVELASFDPFKNTEAALEN 65


>AF043704-1|AAK21475.1|  487|Caenorhabditis elegans Hypothetical
           protein W01B11.3 protein.
          Length = 487

 Score = 85.8 bits (203), Expect = 3e-17
 Identities = 34/76 (44%), Positives = 53/76 (69%)
 Frame = +3

Query: 510 LGHSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPEN 689
           + HS +R +VKFN  ++D MI+Q+++LLD LDK++N + MR+REWY +HFPEL   + ++
Sbjct: 140 VAHSLARYKVKFNPEKIDTMIVQAVSLLDDLDKELNNYVMRVREWYGWHFPELGKTIQDH 199

Query: 690 HLYTKCAEFIKDRRPC 737
             Y K  + I  R+ C
Sbjct: 200 QAYAKIIKAIGMRQNC 215



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 23/69 (33%), Positives = 37/69 (53%)
 Frame = +1

Query: 262 VSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRG 441
           ++EG L + L   L+  + + +K     L V D KLG  I E L + C H  ++ E++RG
Sbjct: 63  ITEGKLSKTLKKLLKSSVDETEK-----LAVGDAKLGNLIKEKLSLNCVHDSSINELMRG 117

Query: 442 IRYHFHLLI 468
           +R H   L+
Sbjct: 118 VRAHIEDLL 126



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/60 (26%), Positives = 36/60 (60%)
 Frame = +2

Query: 80  VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENTT 259
           VLFE +AG+A+F+++  ++L   +  + E  +  ++    + L++F+  K+   A+E T+
Sbjct: 3   VLFEVAAGYAVFKLSNEKKLKN-VDNIWEEFSTAEKAQENLQLVSFKKFKTTAGAVEATS 61


>AC006708-15|AAF60425.1|  504|Caenorhabditis elegans Hypothetical
           protein Y110A7A.8 protein.
          Length = 504

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/51 (23%), Positives = 25/51 (49%)
 Frame = +3

Query: 567 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHLYTKCAEFI 719
           +I++   +   +D ++N     +R+ Y   FPEL ++VP    Y    + +
Sbjct: 101 LIVKLSHVAADIDNEINVIHKFVRDKYEKRFPELETLVPNALTYLATVQLL 151


>AL021175-7|CAE54921.1|  329|Caenorhabditis elegans Hypothetical
           protein Y6E2A.9a protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +1

Query: 310 GLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHLLIKGLTLKA 489
           GL    K S    G L P +  A++ A+ I       + E +       HL+ K   L A
Sbjct: 167 GLNMMVKNSHGLAGRLVPFVAVAVANAINIPMVRANELSEGIELCDEDDHLVAKSKQLAA 226

Query: 490 CSVAQLALA 516
            ++AQ+ L+
Sbjct: 227 LAIAQVTLS 235


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 446 VITSTCSSKVLPSKRAVWHSLPWPLILTSSCQVQCSPS 559
           V  S C     P   A++ + P PL   S CQ  C PS
Sbjct: 389 VCISICQPACDPGCVAIYTTTPAPLHCVSQCQPACLPS 426


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,700,950
Number of Sequences: 27780
Number of extensions: 384669
Number of successful extensions: 958
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)