Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30586
(763 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_9999| Best HMM Match : CH (HMM E-Value=5.7e-16) 50 3e-06
SB_40161| Best HMM Match : CH (HMM E-Value=4.3e-30) 45 6e-05
SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 43 3e-04
SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_57072| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_39164| Best HMM Match : RNB (HMM E-Value=0) 37 0.021
SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26) 36 0.027
SB_51904| Best HMM Match : CH (HMM E-Value=0.0058) 35 0.063
SB_45259| Best HMM Match : CH (HMM E-Value=0.00071) 33 0.25
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 30 2.4
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 28 9.5
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 55.2 bits (127), Expect = 5e-08
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 181 AGELFDELGGRSRVLRFTTSLPAGR--FDYSKLTPERRRHNFTLAFKIADEKAGIYPLLD 354
AGE +L + +L ++ + G D+SKL+ N AF +A+++ + LLD
Sbjct: 149 AGEKVQDLSAKDALLHWSKKVTQGPDLVDFSKLSKTSPEANIEYAFHVAEKELNVPRLLD 208
Query: 355 VEDMVTMRKPDWKCVFTYVQSIHRRF 432
VED+V PD K + TYV S++ F
Sbjct: 209 VEDVVVSENPDEKSIMTYVASLYEVF 234
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/69 (40%), Positives = 36/69 (52%)
Frame = +1
Query: 259 DYSKLTPERRRHNFTLAFKIADEKAGIYPLLDVEDMVTMRKPDWKCVFTYVQSIHRRFKD 438
D+ KL+ E N TLAF I D I LLDV DMV PD V +YV + FKD
Sbjct: 447 DFEKLSKENIVENNTLAFSICDRHFEIPALLDVADMVECTAPDKLTVISYVSQLFNYFKD 506
Query: 439 QN*SSTELS 465
+ ++ +S
Sbjct: 507 KTPANQNVS 515
>SB_9999| Best HMM Match : CH (HMM E-Value=5.7e-16)
Length = 158
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/66 (37%), Positives = 43/66 (65%)
Frame = +1
Query: 262 YSKLTPERRRHNFTLAFKIADEKAGIYPLLDVEDMVTMRKPDWKCVFTYVQSIHRRFKDQ 441
Y L P+ R N+TLAF+ A + GI PLL++ED++ ++ P+ K + TYV +I++ F ++
Sbjct: 88 YETLDPKDRTRNWTLAFEAAYAE-GIDPLLELEDVLRVQVPEPKSLATYVHTIYQHFHEK 146
Query: 442 N*SSTE 459
+ E
Sbjct: 147 TQKAKE 152
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +2
Query: 170 QNVKLENFSTSWADGLAFCALLHHFLPD 253
+ V+++NF+TSWADGLA CAL H+F P+
Sbjct: 57 RGVEIQNFTTSWADGLAMCALFHNFSPE 84
>SB_40161| Best HMM Match : CH (HMM E-Value=4.3e-30)
Length = 144
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +2
Query: 152 KLNKQSQNVKLENFSTSWADGLAFCALLHHFLPDGLTTQN*RRREDDT 295
K K ++V + + S+SW DGLAFCA++H F PD L + + + +T
Sbjct: 12 KQTKSYKHVDINDMSSSWKDGLAFCAIIHRFRPDLLNFDSLKPGDTET 59
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 259 DYSKLTPERRRHNFTLAFKIADEKAGIYPLLDVEDMVTMRKPDWKCVFTYVQSIHRRFKD 438
++ L P N LAF+ A+E+ GI P + +MVT PD + +Y+ + FK+
Sbjct: 48 NFDSLKPGDTETNCKLAFETAEEQLGIPPQISASEMVTSGNPDPLMIMSYISQYYESFKN 107
Query: 439 Q 441
+
Sbjct: 108 E 108
>SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1457
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 226 RFTTSLPAGR-----FDYSKLTPERRRHNFTLAFKIADEKAGIYPLLDVEDMVTMRKPDW 390
+F TS+P GR F Y L N AFK+A + G+ LLD ED+V R PD
Sbjct: 276 QFCTSIPDGRRGPDLFSYDALVGSSPMSNCEHAFKVARDSLGVDSLLDAEDVVRDR-PDK 334
Query: 391 KCVFTYV 411
K + YV
Sbjct: 335 KSIIMYV 341
>SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3172
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 164 QSQNVKLENFSTSWADGLAFCALLHHFLPDGLTTQN*RRREDDTILRSPSKL 319
+S +K++NF+ S++DG A C LLHH+ P L R++ T+ R+P L
Sbjct: 1217 KSYGLKIDNFTVSFSDGRALCYLLHHYHPALLPLS--AIRQETTLTRNPGVL 1266
>SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 170 QNVKLENFSTSWADGLAFCALLHHFLPD 253
+ V + NFS S+A+GLAFCAL+H F PD
Sbjct: 466 KGVNITNFSGSFANGLAFCALIHKFNPD 493
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 253 RFDYSKLTPERRRHNFTLAFKIAD 324
+FD+ L PE R +NF LAF+ +
Sbjct: 494 KFDFDSLDPENRHYNFKLAFETGE 517
>SB_57072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/45 (44%), Positives = 23/45 (51%)
Frame = +1
Query: 307 AFKIADEKAGIYPLLDVEDMVTMRKPDWKCVFTYVQSIHRRFKDQ 441
AF I D I LLDV DMV PD V +YV + FKD+
Sbjct: 1 AFSICDRHFEIPALLDVADMVECTAPDKLTVISYVSQLFNYFKDK 45
>SB_39164| Best HMM Match : RNB (HMM E-Value=0)
Length = 597
Score = 36.7 bits (81), Expect = 0.021
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 170 QNVKLENFSTSWADGLAFCALLHHFLPD 253
++V + + + SW DG+A CA++H F PD
Sbjct: 552 RDVNVRDLTHSWRDGMALCAIIHRFRPD 579
>SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26)
Length = 589
Score = 36.3 bits (80), Expect = 0.027
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +2
Query: 173 NVKLENFSTSWADGLAFCALLHHFLPD 253
+V++ +FS+SW +GLAF A+LH + P+
Sbjct: 253 DVEINDFSSSWQNGLAFSAILHSYNPE 279
>SB_51904| Best HMM Match : CH (HMM E-Value=0.0058)
Length = 1187
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 146 EAKLNKQSQNVKLENFSTSWADGLAFCALLH 238
E L+ VKL++F+ SW DGLAF A++H
Sbjct: 134 EETLDGYEDVVKLKDFTVSWRDGLAFNAIIH 164
>SB_45259| Best HMM Match : CH (HMM E-Value=0.00071)
Length = 1032
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 176 VKLENFSTSWADGLAFCALLHHF 244
V + +FS SW DGLAF A+LH +
Sbjct: 17 VTIRDFSKSWRDGLAFNAILHSY 39
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 295 NFTLAFKIADEKAGIYPLLDVEDMVTMRKPDWKCVFTYVQSI 420
N T AF +A + LL+ ED V + KPD K + TY+ S+
Sbjct: 66 NLTEAFDLAYTHLNVPKLLEPED-VDVEKPDEKSIMTYMASL 106
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 182 LENFSTSWADGLAFCALLHHFLP 250
+ NF T W DG+A C L++ P
Sbjct: 446 INNFDTDWRDGMAICELVNALQP 468
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 158 NKQSQNVKLENFSTSWADGLAFCALLHHFLP 250
+K ++V ++NF+T W DG A L+ P
Sbjct: 505 SKMPESVPMDNFTTHWNDGRAIACLVDAVAP 535
>SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +1
Query: 292 HNFTLAFKIA--DEKAGIYPLLDVEDMVTMRK 381
H+ LAFK+ D+K+ I+ LDVE+ T+R+
Sbjct: 268 HHAALAFKLTARDDKSNIFSNLDVEEFRTVRQ 299
>SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 155 LNKQSQNVKLENFSTSWADGLAFCALLHHFLPDGLTTQN 271
+NK + + + NF+T W DG L P G+ ++N
Sbjct: 265 VNKSAPGIHVRNFNTDWNDGRVIVQYLEEQCP-GMISEN 302
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 211 VRPARRKVLQLYILGLFVEFCFSSCRNLANGDTVFGAG 98
V+ R++ Q+ + F +FC S R+L N DT+ G
Sbjct: 402 VKIKERELRQIDVASSFGQFCKSLSRSLENCDTMLAGG 439
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,375,717
Number of Sequences: 59808
Number of extensions: 446664
Number of successful extensions: 1136
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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