Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30584
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.88 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.88 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.88 
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    23   2.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.2  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 630 LPRPFMILGDFNSHHTSW 577
           +P P M L DF SH  +W
Sbjct: 202 VPPPLMFLQDFLSHQHAW 219


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 630 LPRPFMILGDFNSHHTSW 577
           +P P M L DF SH  +W
Sbjct: 435 VPPPLMFLQDFLSHQHAW 452


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 630 LPRPFMILGDFNSHHTSW 577
           +P P M L DF SH  +W
Sbjct: 435 VPPPLMFLQDFLSHQHAW 452


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +3

Query: 450 SMALITSPGFV-RRVGEPEFKCTGYTCLRCLIIHNHNY*ILNYP 578
           S+ L  S  F+ R++GE    C G    +  I H H Y + + P
Sbjct: 72  SLRLYPSVHFISRKLGEDFVTCNGLKLPKSTITHLHIYDLHHNP 115


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 42  PPPHPH 25
           PPPHPH
Sbjct: 737 PPPHPH 742


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 42  PPPHPH 25
           PPPHPH
Sbjct: 629 PPPHPH 634


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,590
Number of Sequences: 336
Number of extensions: 3855
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)