Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30583
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...    79   3e-15
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    76   2e-14
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    31   0.90 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z82067-1|CAB63317.1|  794|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical pr...    28   6.3  
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro...    28   8.4  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 31/46 (67%), Positives = 39/46 (84%)
 Frame = +3

Query: 9   MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRS 146
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGYP AK R+
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRT 46


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = +3

Query: 9   MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRS 146
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGY  AK R+
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRT 46


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 27  SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 134
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 93  TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 27  SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 134
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198


>Z82067-1|CAB63317.1|  794|Caenorhabditis elegans Hypothetical
           protein W03H9.1 protein.
          Length = 794

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 25/79 (31%), Positives = 35/79 (44%)
 Frame = +3

Query: 225 MKPTLIEVIFATRILPCKM*V**WKYLSMWFYTYKIVTVFHTSVILPGKLTLVHYTNLIR 404
           M  +LI      R+L  K  V   K+       YKI  V    V + GK T  HY+  I 
Sbjct: 259 MSRSLIHEFLGFRVLASKDSVNNLKHSLSTVDNYKIDVVVKEKVTV-GKATTKHYSTRIS 317

Query: 405 VHIAVACLLKWSNLLYHNN 461
           +   +  L+K + LL H+N
Sbjct: 318 IIDLMKELVKRTELLDHHN 336


>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical protein
            F52E10.1 protein.
          Length = 1201

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 42   RNKTHTLCR-RCGRSSYHIQKSKCAQCGYPAAKLRSCKYL 158
            RN+   +C+ RC    Y  +K K  Q     AK++  KYL
Sbjct: 934  RNRHREMCKTRCEHGEYDYEKFKARQVPINPAKMKERKYL 973


>Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical
           protein C17H1.9 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +1

Query: 40  AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 147
           A+++ I+Y  D +++H   + F+NQ   +   L+ N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268


>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger protein
            protein.
          Length = 1203

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 42   RNKTHTLC-RRCGRSSYHIQKSKCAQCGYPAAKLRSCKYL 158
            RN+   +C  RC    Y  +K K  Q     AK++  KYL
Sbjct: 936  RNRHREMCFSRCEHGEYDYEKFKARQVPINPAKMKERKYL 975


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,652,287
Number of Sequences: 27780
Number of extensions: 305455
Number of successful extensions: 571
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)