Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30582
(758 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 89 5e-19
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 40 5e-04
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 39 7e-04
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 38 0.002
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 38 0.002
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 36 0.008
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 36 0.008
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 35 0.014
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 35 0.014
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 34 0.025
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 34 0.025
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 34 0.025
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 34 0.025
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 33 0.033
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 33 0.033
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 33 0.058
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 33 0.058
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 33 0.058
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 32 0.077
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 32 0.077
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 32 0.10
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 32 0.10
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 32 0.10
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 31 0.13
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 31 0.13
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 31 0.18
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 31 0.18
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 31 0.18
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 31 0.18
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 31 0.24
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 30 0.31
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 30 0.31
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 30 0.31
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 30 0.31
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 29 0.54
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 29 0.54
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 29 0.54
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 29 0.54
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 29 0.72
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 29 0.72
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 29 0.72
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 29 0.72
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 29 0.72
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 29 0.95
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 29 0.95
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 29 0.95
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 28 1.3
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 28 1.3
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 28 1.3
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 28 1.3
SPAC12G12.10 |||WD repeat protein, human WDR21 family|Schizosacc... 28 1.7
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 28 1.7
SPAC1006.02 |||WD repeat protein, human GNB1L family|Schizosacch... 27 2.2
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 27 2.9
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 27 2.9
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 27 2.9
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 27 2.9
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 27 2.9
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 27 3.8
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 27 3.8
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 26 5.1
SPAC227.07c |pab1||protein phosphatase regulatory subunit Pab1|S... 26 5.1
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 26 5.1
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 26 5.1
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 26 5.1
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 26 5.1
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 26 6.7
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 26 6.7
SPBC211.05 |||splicing factor 3B|Schizosaccharomyces pombe|chr 2... 26 6.7
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 26 6.7
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 26 6.7
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 26 6.7
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 8.9
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 25 8.9
SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr 1|... 25 8.9
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 25 8.9
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 8.9
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 89.4 bits (212), Expect = 5e-19
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Frame = +3
Query: 258 RNYDPSLHPLEAPREYVRALNAVKLERVFAKPFIGCLD-GHRDGVSTMAKHPSQLAVLAS 434
RN DPSLHP E REY RALNA K++R+FA PF+G L GH+DGV ++A+ L AS
Sbjct: 23 RNLDPSLHPFERAREYTRALNATKMDRMFAAPFLGQLGRGHQDGVYSLARDTKTLIDCAS 82
Query: 435 GAFDGEVRIWDLTVRKCTR-NFVAHE 509
G+ DG V++WD + R C R AHE
Sbjct: 83 GSGDGAVKLWDASER-CERWTSKAHE 107
Score = 29.5 bits (63), Expect = 0.54
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = +2
Query: 509 GWVRALCYNPDGKHFMSVGDDKTIKTWKAEAVTEEDEEPTNTLLSMSVVSGITHHRNKPI 688
G VR L ++ G +S D+ + + ++D + + L S + I + +
Sbjct: 108 GIVRGLVFSNQGD-VLSCASDRYVYM-----LNKQDGKVKRSYLGDSSLLDIDTSKGGDL 161
Query: 689 FATCGEQCQLWENTRNEPI 745
FAT GE +W+ +R+ P+
Sbjct: 162 FATSGENVSIWDYSRDTPV 180
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTWKAEA 601
V A+ ++ D ++ S DD ++ W+A A
Sbjct: 319 VTAVKFSMDAQYIFSGSDDSNVRLWRARA 347
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 39.5 bits (88), Expect = 5e-04
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
L+GH++GV + H + L SG+ D VR+W++ KCT F H
Sbjct: 387 LEGHKEGVWAVKIHEN---TLVSGSIDKTVRVWNIEKAKCTHIFRGH 430
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 536 PDGKHFMSVGDDKTIKTWKAEAVTEEDEEPTNT 634
PD + +S D T++ WK T+ P NT
Sbjct: 455 PDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNT 487
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 426 LASGAFDGEVRIWDLTVRK 482
L SG+ D +RIWDL K
Sbjct: 602 LISGSADSTIRIWDLNTGK 620
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 39.1 bits (87), Expect = 7e-04
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 357 IGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
+ CL GH + VS++ +P +L SG++D VRIW+L C R AH +
Sbjct: 131 VRCLKGHTNYVSSIDFNPLG-TLLVSGSWDETVRIWNLQDGTCLRMLPAHSE 181
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
L GH G+S + K + LAS + D +RIWD R R H
Sbjct: 92 LFGHYRGISQV-KWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGH 137
Score = 26.6 bits (56), Expect = 3.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 429 ASGAFDGEVRIWDLTVRKCTRNFV 500
A+ ++DG RIWD+ +C + V
Sbjct: 196 ATASYDGMARIWDVLSGQCLKTLV 219
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 357 IGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
+G L GHR GV + +P LASG+ D +RIW++ ++C + H
Sbjct: 500 VGVLRGHRRGVWACSFNPFSRQ-LASGSGDRTIRIWNVDTQQCVQTLEGH 548
Score = 33.5 bits (73), Expect = 0.033
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 324 VKLERVFAKPFIGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVA 503
+++ V + + L+GH + + + SQ + S A DG V++W L+ +C
Sbjct: 531 IRIWNVDTQQCVQTLEGHTGAILKLI-YISQGTQVVSAAADGLVKVWSLSSGECVATLDN 589
Query: 504 HED 512
HED
Sbjct: 590 HED 592
Score = 31.9 bits (69), Expect = 0.10
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 372 GHRDGVSTMA--KHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
GH +S + KH + VLASGA D VR+WDL + F H
Sbjct: 143 GHGGVISALCFGKHQNTW-VLASGADDSRVRLWDLNSSRSMAVFEGH 188
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTWKAEAVTEEDEEPTNTLLSMSVVSGITHHRNKPIFA 694
+R L + P G +S DKT++ W + + P S+ + + + I
Sbjct: 192 IRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIP--VFHSVEAIGWVNGQPEEKILY 249
Query: 695 TCGE 706
T GE
Sbjct: 250 TAGE 253
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTW 589
V A+ + DG+ S DKTIK W
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLW 492
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 37.5 bits (83), Expect = 0.002
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 375 HRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
H D V ++ + + +L SG+ D +++WDL+ C ++F H D
Sbjct: 253 HTDAVLALSSNRNAHNLLVSGSADTTLKLWDLSTCNCVKSFTYHSD 298
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 426 LASGAFDGEVRIWDLTV 476
+A G FD E+ IWDL +
Sbjct: 205 VAVGTFDPEIEIWDLDI 221
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWD 467
L H +S ++ +PS + +A+G+ D V++W+
Sbjct: 379 LQAHDGPISCLSVNPSVPSFVATGSTDRVVKLWN 412
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 35.5 bits (78), Expect = 0.008
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 324 VKLERVFAKPFIGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVA 503
++L +K I L GH D V + +L + + D +++W L +KC +F+A
Sbjct: 198 IQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASS-DATIKLWSLRAQKCLFSFIA 256
Query: 504 HED 512
H D
Sbjct: 257 HSD 259
Score = 29.9 bits (64), Expect = 0.41
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 372 GHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
G R GV ++A + + ++A+G ++++WD +K + V H D
Sbjct: 174 GPRSGVYSLAANNN---IIANGGLQKDIQLWDCVSKKRITDLVGHTD 217
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +2
Query: 512 WVRALCYNPDGKHFMSVGDDKTIKTWK 592
WV + D + +S D T+K WK
Sbjct: 81 WVNDIALTHDSEGVISCSSDSTVKLWK 107
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTWKAEA 601
VR + + DG+ ++ D TIK W A
Sbjct: 219 VRDILISDDGRTILTASSDATIKLWSLRA 247
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 35.5 bits (78), Expect = 0.008
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 420 AVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
A +ASG DG +RIWDL + R+F+ H
Sbjct: 507 AAVASGTVDGLIRIWDLRIGLPVRSFIGH 535
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 426 LASGAFDGEVRIWDL 470
L SG++D VRIWDL
Sbjct: 549 LYSGSYDNSVRIWDL 563
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 34.7 bits (76), Expect = 0.014
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 372 GHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
GH++ V ++ HP+ A LA+G+ D R+WD+ R F AH
Sbjct: 485 GHQNDVDCVSFHPNA-AYLATGSSDHTTRMWDVRTGGTVRVFNAH 528
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 34.7 bits (76), Expect = 0.014
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 375 HRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
H+ V+ + HP+Q +L+ G VR WDL CT + ED
Sbjct: 123 HKSPVNDLLIHPNQGELLSCDQ-SGRVRAWDLGENSCTHELIPEED 167
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 369 DGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNF 497
+GH + V+ +A H LA+ + DG V++WD+ RN+
Sbjct: 80 EGHTNNVTAIAFHCDG-KWLATSSEDGTVKVWDMRAPSVQRNY 121
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTW--KAEAVTE--EDEEPTNTLL 640
V A+ ++ DGK + +D T+K W +A +V + + P N LL
Sbjct: 86 VTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDLL 131
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.9 bits (74), Expect = 0.025
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWD 467
L GH ++T+ ++ ++LASG+FD +VR+WD
Sbjct: 94 LGGHLAQINTI-RYNEDSSILASGSFDSKVRLWD 126
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTW--KAEAVTEEDEEPTNTLLSMSVVSGITHHRNKPI 688
+ + YN GK+ ++ G+++ ++ W K+ A E + +L + +V T
Sbjct: 17 INVVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTK------ 70
Query: 689 FATCG--EQCQLWE 724
FA+CG + Q+W+
Sbjct: 71 FASCGGDKFIQVWD 84
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 33.9 bits (74), Expect = 0.025
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNF 497
L GH V + P VLASG+ DG R+WD +RK + +F
Sbjct: 185 LSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWD--IRKVSSSF 226
Score = 26.6 bits (56), Expect = 3.8
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +3
Query: 375 HRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLT 473
H+ G++ + P + S +FD +++WD++
Sbjct: 102 HKFGITDLHWFPFDNGIFTSSSFDHTLKVWDVS 134
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 33.9 bits (74), Expect = 0.025
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTWK 592
V+ + ++P GK+F + DD+TIK W+
Sbjct: 179 VKGITFDPAGKYFATESDDRTIKVWR 204
Score = 31.5 bits (68), Expect = 0.13
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 533 NPDGKHFMSVGDDKTIKTWKAEAVTEEDE-EPTNTLLSMSVVSGITH 670
+PDG + G D TI+ W EA+ E+E E N L + TH
Sbjct: 27 HPDGSRIATGGLDGTIRIWSTEAINRENENENENEDLPKQLCCMSTH 73
Score = 30.7 bits (66), Expect = 0.24
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 351 PFIGCLD--GHRDGVSTMAKHPSQLAVLASGAFDGEVRIW 464
P++G D GHR + ++ HP + A+G DG +RIW
Sbjct: 7 PWLGHFDDRGHRLSIFSIHIHPDGSRI-ATGGLDGTIRIW 45
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 488 KKFCCS*---GWVRALCYNPDGKHFMSVGDDKTIKTW-KAEAV 604
K+ CC G V ++ ++P+G++ S DD+ + W K EA+
Sbjct: 65 KQLCCMSTHTGTVTSVRFSPNGQYLASGSDDRVVIIWHKEEAI 107
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 33.9 bits (74), Expect = 0.025
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
L GH V T+ HPS+ +LASG+ D V+ WD C H++
Sbjct: 202 LTGHGWDVKTVDWHPSK-GLLASGSKDNLVKFWDPRTGTCIATLHGHKN 249
Score = 30.3 bits (65), Expect = 0.31
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTWKAEAVTEE 613
VR + ++P+ F++ DD ++K W TEE
Sbjct: 167 VRDVAFSPNDSKFVTASDDGSLKVWNFHMSTEE 199
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 33.5 bits (73), Expect = 0.033
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTWKAE 598
+R L ++ DG+ F+S DKTIK W E
Sbjct: 313 IRDLSFSQDGRSFLSTSFDKTIKLWDTE 340
Score = 32.3 bits (70), Expect = 0.077
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 372 GHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDL-TVRKCTRNFVAH 506
GH G+S + P +L SG+ D +++IW++ R R F H
Sbjct: 264 GHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGH 309
Score = 25.8 bits (54), Expect = 6.7
Identities = 7/28 (25%), Positives = 18/28 (64%)
Frame = +2
Query: 509 GWVRALCYNPDGKHFMSVGDDKTIKTWK 592
G + ++ + +GK F++ DD +++ W+
Sbjct: 397 GGINSITFLENGKRFVTTSDDSSMRFWE 424
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 33.5 bits (73), Expect = 0.033
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 366 LDGHRDGVSTMA-KHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
L GH VS A S A+ AS +D +R+WDL +CT FV H
Sbjct: 59 LTGHSHFVSDCALSFDSHYALSAS--WDKTIRLWDLEKGECTHQFVGH 104
Score = 29.5 bits (63), Expect = 0.54
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +2
Query: 512 WVRALCY--NPDGKHFMSVGDDKTIKTWKAE 598
WV + + NPD F+S G DK +K W E
Sbjct: 150 WVSCVRFSPNPDNLTFVSAGWDKAVKVWDLE 180
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDL 470
L+GH V++++ P +L SG+ D + +W+L
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNL 45
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 372 GHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDL 470
GH VS + P ++ ASG DG + +WDL
Sbjct: 190 GHTGYVSAVTISPDG-SLCASGGRDGTLMLWDL 221
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 509 GWVRALCYNPDGKHFMSVGDDKTIKTW 589
G+V A+ +PDG S G D T+ W
Sbjct: 193 GYVSAVTISPDGSLCASGGRDGTLMLW 219
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 32.7 bits (71), Expect = 0.058
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 369 DGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
DGH V +A HP+Q + SG D +V +W+ RK + H D
Sbjct: 50 DGHDGPVRGIAFHPTQ-PLFVSGGDDYKVNVWNYKSRKLLFSLCGHMD 96
Score = 31.5 bits (68), Expect = 0.13
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 357 IGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLT 473
I L GH V A HPS+ ++ S + D VR+WD++
Sbjct: 130 IAILTGHSHYVMCAAFHPSE-DLIVSASLDQTVRVWDIS 167
Score = 30.7 bits (66), Expect = 0.24
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRK 482
L+GH GV+ A HP+ +L++G D V++W +T K
Sbjct: 208 LEGHDRGVNWCAFHPTLPLILSAGD-DRLVKLWRMTASK 245
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 32.7 bits (71), Expect = 0.058
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHEDG 515
L GH V+++ ++ S+ ++ + + D +R WD+T C R AH+ G
Sbjct: 343 LRGHLASVNSV-QYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRG 391
Score = 28.7 bits (61), Expect = 0.95
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWD 467
L GH D + T+ + ++ SG +DG VRIW+
Sbjct: 425 LQGHEDLIRTVRFNDEKIV---SGGYDGTVRIWN 455
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 32.7 bits (71), Expect = 0.058
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 375 HRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
H D +ST+ ++ S + +GA DG++++WD+ C F H
Sbjct: 338 HYDALSTL-QYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQH 380
Score = 32.7 bits (71), Expect = 0.058
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVR 479
L GH VS+++ + S ++LASG++D VRIWD+ R
Sbjct: 463 LAGHEGPVSSLSFNSSG-SLLASGSWDKTVRIWDIFSR 499
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 423 VLASGAFDGEVRIWDLTVRKCTRNFVA 503
VL S + DG VR WDL + R F A
Sbjct: 395 VLFSSSLDGSVRAWDLIRYRNFRTFTA 421
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 32.3 bits (70), Expect = 0.077
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 318 NAVKLERVFAKPFIGCLDGHRDGVSTM-AKHPSQLAVLASGAFDGEVRIWDLTVRKCTRN 494
N VK+ + + F L GH+ V +M + S+L V S D V+IW L C ++
Sbjct: 556 NTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSA--DKNVKIWGLDFGDCHKS 613
Query: 495 FVAHEDG*ELYVTIQMES 548
AH+D + VT Q ++
Sbjct: 614 IFAHQDS-IMEVTFQPDT 630
Score = 30.7 bits (66), Expect = 0.24
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
L+GH+ V+TM LASG+ D ++ +WD+ H+D
Sbjct: 100 LNGHKSAVTTM-DFDKMGTRLASGSMDTDIIVWDIVAETGLFRLRGHKD 147
Score = 30.7 bits (66), Expect = 0.24
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +2
Query: 509 GWVRALCYNPDGKHFMSVGDDKTIKTWKAEAVTEEDEEPTNTLLSMSVVSGITHHRNKPI 688
G + A+C +PD K ++ G +K W+ + + PT T + + R++PI
Sbjct: 216 GEIWAMCVSPDAKRCLTAGTGSDVKVWEISFPDDNNFTPT-TKAFQQLGTFTRQSRDRPI 274
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 32.3 bits (70), Expect = 0.077
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHEDG 515
L GH DGV + + +LASG++D +R+W+L + H G
Sbjct: 269 LSGHSDGVMCLQLVRN---ILASGSYDATIRLWNLATFQQVALLEGHSSG 315
Score = 30.3 bits (65), Expect = 0.31
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 357 IGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
+ L+GH GV+ + +L SG+ D +RIW+ +C H D
Sbjct: 306 VALLEGHSSGVTCLQFDQCKLI---SGSMDKTIRIWNYRTSECISILHGHTD 354
Score = 28.7 bits (61), Expect = 0.95
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 426 LASGAFDGEVRIWDLTVRKCTRNFVAHEDG 515
L S + DG ++ WD+ +KC H +G
Sbjct: 447 LFSCSLDGTIKQWDIEKKKCVHTLFGHIEG 476
Score = 26.6 bits (56), Expect = 3.8
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 348 KPFIGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
K + L GH +GV +A +L SGA DG V++W+ +C H +
Sbjct: 464 KKCVHTLFGHIEGVWEIAADHLRLI---SGAHDGVVKVWEAC--ECVHTLKNHSE 513
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 31.9 bits (69), Expect = 0.10
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +3
Query: 363 CLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNF 497
CL GH D VS M+ + ++ L SG D V +WDL KC F
Sbjct: 222 CL-GHEDFVSRMSLYDNR--TLISGGGDNHVFVWDLENFKCLDAF 263
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 31.9 bits (69), Expect = 0.10
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWD 467
L GH V + HP+ VLAS + D +++WD
Sbjct: 130 LKGHSRKVGLVQYHPTAANVLASSSADNTIKLWD 163
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 31.9 bits (69), Expect = 0.10
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTWKAEAVT 607
V ++ ++PDGK+ +S D TIK W+ + V+
Sbjct: 461 VYSVAFSPDGKYLVSGSLDNTIKLWELQCVS 491
Score = 29.9 bits (64), Expect = 0.41
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 426 LASGAFDGEVRIWDLTVRKCTRNFVAHEDG*ELY 527
LA+G D ++RIWD+ ++ R HE E+Y
Sbjct: 349 LATGVEDQQIRIWDIAQKRVYRLLTGHEQ--EIY 380
Score = 28.7 bits (61), Expect = 0.95
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +2
Query: 512 WVRALCYNPDGKHFMSVGDDKTIKTW 589
+VR++ ++PDGK+ + +D+ I+ W
Sbjct: 336 YVRSVAFSPDGKYLATGVEDQQIRIW 361
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 512 WVRALCYNPDGKHFMSVGDDKTIKTWKAEA 601
++ ++ +PDGK +S D+TI+ W ++
Sbjct: 514 FILSVTVSPDGKWIISGSKDRTIQFWSPDS 543
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTWKAEA 601
+ +L ++ DGK +S D+T+ W EA
Sbjct: 379 IYSLDFSKDGKTLVSGSGDRTVCLWDVEA 407
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 31.5 bits (68), Expect = 0.13
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 512 WVRALCYNPDGKHFMSVGDDKTIKTW 589
+VR + ++PDGK+ ++ +D+ IK W
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLW 387
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 387 VSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHE 509
V T+A P L +G D ++++WDL+ +K F HE
Sbjct: 363 VRTIAFSPDG-KYLVTGTEDRQIKLWDLSTQKVRYVFSGHE 402
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTWKAEA 601
V ++ ++PD +S DKTIK W+ +A
Sbjct: 487 VYSIAFSPDSSILLSGSLDKTIKVWELQA 515
Score = 27.1 bits (57), Expect = 2.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTWKAE 598
V ++C++PDG+ F S D + W +
Sbjct: 583 VISVCFSPDGRQFASGSGDLRARIWSID 610
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 31.5 bits (68), Expect = 0.13
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 384 GVSTMAKHPSQLAVLASGAFDGEVRIWDL 470
G++ +A HPS+ L G DG++R+WDL
Sbjct: 122 GITGIAVHPSEKLALTVGG-DGKLRLWDL 149
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 31.1 bits (67), Expect = 0.18
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDL 470
L+GH D V + P +LAS + D V IWDL
Sbjct: 321 LEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDL 355
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 31.1 bits (67), Expect = 0.18
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 369 DGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHEDG 515
+GH V ++A +P AS DG V++W AH+ G
Sbjct: 138 EGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRG 186
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPS-QLAVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
L H GV+ + +P+ L + D +++WD + C R H
Sbjct: 180 LQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGH 227
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 31.1 bits (67), Expect = 0.18
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLT 473
L+GH D V+ ++ P + +LAS + D +WDL+
Sbjct: 321 LEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLS 356
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 31.1 bits (67), Expect = 0.18
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +2
Query: 509 GWVRALCYNPDGKHFMSVGDDKTIKTWK-AEAVTEEDEEPTNTLLSMSVVSGITHHRNKP 685
GWVR + P + F + D+TIK W A V + ++ V G+ P
Sbjct: 164 GWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLK-----LTLTGHIATVRGLAVSPRHP 218
Query: 686 IFATCGE--QCQLWENTRNEPIK 748
+CGE + W+ N+ I+
Sbjct: 219 YLFSCGEDKMVKCWDLETNKVIR 241
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 30.7 bits (66), Expect = 0.24
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 312 ALNAVKLERVFAKPFIGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTR 491
A V++ + + + LD H+ V P SG+ D V++WDL+
Sbjct: 101 ATGLVQIFDLSTRSILRALDAHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDLSTGAVQY 160
Query: 492 NFVAHED 512
+ HED
Sbjct: 161 DLSGHED 167
Score = 29.9 bits (64), Expect = 0.41
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTV 476
L GH D V T + + L SG +DG +R+WD +
Sbjct: 162 LSGHEDYVRTASWMSATR--LVSGGYDGTIRLWDTRI 196
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 30.3 bits (65), Expect = 0.31
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 363 CLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDL 470
C H D V+++A HP SG+ D ++R+W +
Sbjct: 344 CCFEHSDFVTSIAFHPKDDRFFLSGSLDCKLRLWSI 379
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 30.3 bits (65), Expect = 0.31
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNF 497
L+GH + + + S +L SG+ D ++IWD+T C F
Sbjct: 97 LEGHEHNIPCITFNSSG-TLLLSGSIDRSLQIWDITSLSCLCKF 139
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 30.3 bits (65), Expect = 0.31
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 366 LDGHRDGVSTMA--KHPSQLAVLASGAFDGEVRIWDLTV 476
L GH D V T++ K A LASG+ D +R+W++++
Sbjct: 187 LRGHLDWVRTLSFKKTSGSTATLASGSQDRYIRLWNISL 225
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 354 FIGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWD 467
F L GH D V ++ HP++ +L+S A D + +W+
Sbjct: 260 FDALLMGHEDWVMSVDWHPTKEMILSSSA-DSSMIVWE 296
Score = 26.6 bits (56), Expect = 3.8
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIK 583
V+ + ++P+GK ++S G D+T +
Sbjct: 373 VKGVAWDPEGKFYLSAGTDQTTR 395
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 30.3 bits (65), Expect = 0.31
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 372 GHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKC 485
GH+ V ++ H S LASG DG +RIW++ +C
Sbjct: 377 GHKGRVRCLSVHVSG-NWLASGGDDGVLRIWEVMTGRC 413
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 29.5 bits (63), Expect = 0.54
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 426 LASGAFDGEVRIWDLTVRKCTRNFVAH 506
L +G+ D VR+WDL +C + F H
Sbjct: 459 LVTGSTDRTVRVWDLRTGECKQVFYGH 485
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 354 FIGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
+I L GH D V +A ++ S ++DG +R+W + C H
Sbjct: 569 YIRTLRGHTDSVREVACLGD---LIVSASYDGTLRVWKASTGVCLHVLRGH 616
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 29.5 bits (63), Expect = 0.54
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 369 DGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLT 473
D H D ++ + HP +L +G+ DG V + D T
Sbjct: 143 DAHNDDITHLQFHPKDNELLLTGSVDGLVSLLDTT 177
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 29.5 bits (63), Expect = 0.54
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 315 LNAVKLERVFAKPFIGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTV 476
L ++K A P + HR + ++ HP++ +V+ D ++ +WDL+V
Sbjct: 367 LRSLKSSSSVATP-VASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSV 419
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 375 HRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCT 488
H V + PS+ V +S + DG RIWD+ ++ T
Sbjct: 290 HTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKT 327
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 29.5 bits (63), Expect = 0.54
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 375 HRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
H+D V +++ +P + ASG D IWD+T + H+D
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKD 105
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 29.1 bits (62), Expect = 0.72
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 435 GAFDGEVRIWDLTVRKCTRNFVAHED 512
G DG ++IWDL C+ H+D
Sbjct: 195 GGIDGAIKIWDLRNNHCSHVLKGHKD 220
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 29.1 bits (62), Expect = 0.72
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +3
Query: 375 HRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHEDG 515
H + + S + L S + DGEV++WD+ + + F G
Sbjct: 1177 HSSEIVNVEMQSSGMRELISASSDGEVKLWDIRMNHSLQTFSTDNSG 1223
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 29.1 bits (62), Expect = 0.72
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 509 GWVRALCYNPDGKHFMSVGDDKTIKTWKAEAVTE 610
G VR L N DG++ ++ G D +K W E
Sbjct: 266 GPVRDLAVNRDGRYMVTAGADSLLKVWDLRTYKE 299
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 29.1 bits (62), Expect = 0.72
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDL 470
L GH++ VS ++ P + AS + D R+WD+
Sbjct: 351 LSGHKNLVSGLSASPENPYMFASVSHDNTCRVWDV 385
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 509 GWVRALCYNPDGKHFMSVGDDKTIKTWKAEAVTEEDEEPTNTLLSMSVVSGIT 667
G V + ++ D SVG D TIKTW + +T ++ + T + V +T
Sbjct: 270 GPVMDIVFSDDPSVAYSVGQDHTIKTW--DLITGQNVDSKITKAPLLCVEKLT 320
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 29.1 bits (62), Expect = 0.72
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 357 IGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWD 467
IG L GH V +A L LASG D V+IWD
Sbjct: 297 IGTLQGHSSEVCGLAWRSDGLQ-LASGGNDNVVQIWD 332
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 28.7 bits (61), Expect = 0.95
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 485 YKKFCCS*GWVRALCYNPDGKHFMSVGDDKTIKTW 589
+ K G V + Y+P+G S G DKTI+ W
Sbjct: 214 FLKLAAHNGVVLCVNYSPNGVFLASCGRDKTIRIW 248
Score = 25.4 bits (53), Expect = 8.9
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 294 PREYVRALNAVKLERV---FAK-PFIGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRI 461
P E+V A ++ L++ F K PF+ L H +GV + LAS D +RI
Sbjct: 190 PNEFVAAYDSGILQKWDIRFPKLPFLK-LAAH-NGVVLCVNYSPNGVFLASCGRDKTIRI 247
Query: 462 WDLTVRK 482
WD T K
Sbjct: 248 WDSTSNK 254
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 28.7 bits (61), Expect = 0.95
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 524 LCYNPDGKHFMSVGDDKTIKTWKAEA 601
L ++ DG++ SV +D+T++ W E+
Sbjct: 200 LKFSSDGRYLCSVSEDRTLRLWSIES 225
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 28.7 bits (61), Expect = 0.95
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +2
Query: 515 VRALCYNP-DGKHFMSVGDDKTIKTW 589
V + YNP D F S GDD T++ W
Sbjct: 473 VNYVAYNPVDPYQFASAGDDNTVRIW 498
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 357 IGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRK 482
+G +GH + T + S ++ SGA D +R+WD+ K
Sbjct: 45 LGTYEGHTGAIWTCDINKSS-TLMVSGAADNTMRLWDVKTGK 85
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 357 IGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRI 461
+G + GH ++T+A HP ASG DG VR+
Sbjct: 281 LGRVKGHFGPINTIAVHPKGTG-YASGGEDGYVRV 314
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 494 ISCTLPYS*IPNTYFTIKCSTS*NC*LA-RMLGHSRNPISVTI 369
++CT+P + NTYFT ++ N +A GHS+ + V I
Sbjct: 685 LNCTIPEFNVSNTYFTFSSPSTDNFVIAVYQRGHSKVLVEVCI 727
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDL 470
L GH V+ M H VLA+ + D V WDL
Sbjct: 318 LHGHTRAVTDMNWHRQNPDVLATCSIDSSVHCWDL 352
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 512 WVRALCYNPDGKHFMSVGDDKTIKTWKAEAVTEEDEEPTNTLLSMS 649
+V +L Y + + S G+D+TI+ WK + + PT ++ S+S
Sbjct: 217 FVYSLTYIHNQQLIASCGEDRTIRIWKGKECLQCITLPTTSVWSVS 262
>SPAC12G12.10 |||WD repeat protein, human WDR21
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 420
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 521 ALCYNPDGKHFMSVGDDKTIKTWKAE 598
AL N +G F S GDD ++ WK +
Sbjct: 351 ALMKNENGSIFSSAGDDYVLRFWKTD 376
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +3
Query: 357 IGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNF 497
I L GH + ++ PS + +G D ++WDL C F
Sbjct: 140 ISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATF 186
>SPAC1006.02 |||WD repeat protein, human GNB1L
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 368
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 357 IGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDL 470
+ L H DG++++A HP V+A + D + +W L
Sbjct: 331 LAVLKYHSDGINSLAFHPGS-NVIALASKDTRISLWKL 367
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 378 RDGVSTMAKHPSQLAVLASGAFDGEVRIWDL 470
R ++ P ++A GA++G+V +WDL
Sbjct: 243 RSEITVCKPSPFHPQLIAGGAYNGQVFLWDL 273
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1328
Score = 27.1 bits (57), Expect = 2.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 335 EGICQALYWLFRWSQRWGFYY 397
EG+ L++ +R Q WG+YY
Sbjct: 524 EGLQWVLFYYYRGCQSWGWYY 544
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 27.1 bits (57), Expect = 2.9
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +3
Query: 318 NAVKLERVFAKPFIGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNF 497
N V++ V + + L GH + T + Q + +S ++D +RIWD KC
Sbjct: 249 NTVRIWNVKLRTLLFTLSGHTAPI-TCVRWGGQNWIYSS-SYDKTIRIWDAKDGKCLHIL 306
Query: 498 VAH 506
H
Sbjct: 307 KGH 309
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 354 FIGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
F+ L GH V A + +L S + D +++WD+ +K + HED
Sbjct: 423 FLATLRGHVAAVYQCA-WSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHED 474
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTW 589
V A+ ++PDG+ S G DK ++ W
Sbjct: 476 VFAVDWSPDGQRVASGGADKAVRIW 500
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 423 VLASGAFDGEVRIWDLTVR 479
+LASG+ D VRIW++ +R
Sbjct: 241 LLASGSKDNTVRIWNVKLR 259
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 357 IGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAHED 512
+ L GH+ V ++ S +LA+ ++D RI+D C R H +
Sbjct: 226 LSVLSGHQLAVRSIKSSNSAHDLLATASYDMTSRIFDPEQHSCIRKVDLHSE 277
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 426 LASGAFDGEVRIWDLTVRKCTRNFVAH 506
LASG +G V IWDL+ +R H
Sbjct: 39 LASGLVNGSVVIWDLSTFSVSRVLTGH 65
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 366 LDGHRDGVSTMA-KHPSQLAVLASGAFDGEVRIW 464
L GH V + HP +LAS ++DG V +W
Sbjct: 49 LRGHSGPVWQLGWAHPKFGTILASASYDGHVIVW 82
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTW---KAEAVTEEDEEPTNTLLSM 646
+ A +PD HF + D T+ +W K +A E TN ++ M
Sbjct: 318 ITAATLSPDATHFYTASYDGTVLSWDIGKQKAFPLVGESHTNQVMQM 364
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 387 VSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTR 491
V+ + HP + +G DG V WD+ VRK R
Sbjct: 236 VNDLKFHPIHQTLATAGG-DGVVAFWDIQVRKRLR 269
>SPAC227.07c |pab1||protein phosphatase regulatory subunit
Pab1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 527 CYNPDGKHFMSVGDDKTIKTWK 592
C + HF+ +DKTIK WK
Sbjct: 98 CKRTNRAHFLLSTNDKTIKLWK 119
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = +3
Query: 348 KPFIGCLDGHRDGVS-----TMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNF 497
+ F CLD H D V+ T P+ + +G+ DG V WD+ ++F
Sbjct: 207 RKFRYCLDSHADSVTCIDALTGDLPPTGEIGMVTGSDDGSVHCWDVKTGVSLQSF 261
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +3
Query: 267 DPSLHPLEAPREYVRALNAVKLERVFAKPFIGCLDGHRDGVSTMAKHPSQLAVLASGAFD 446
D + P + E A+ + + I ++GH V +A P LAS +FD
Sbjct: 147 DSNHQPAVSIEESKEAVESTSQSSEISFKLIKVIEGHHTFVGGLAFDPMG-QFLASQSFD 205
Query: 447 GEVRIWDLT 473
+++W L+
Sbjct: 206 HTLKVWKLS 214
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +2
Query: 509 GWVRALCYNPDGKHFMSVGDDKTIKTWKAEAVT 607
G V ++PD K+ +S +D + + W + T
Sbjct: 380 GPVYGTTFSPDNKYLLSCSEDASARLWSVDTKT 412
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 426 LASGAFDGEVRIWDLTVRKC 485
L +GAFD V++WD+ C
Sbjct: 314 LYTGAFDNAVKVWDMEGNLC 333
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 420 AVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
++L SG DG V +WD R+ R V +
Sbjct: 309 SLLISGDKDGNVLVWDSVSRQVLRRLVQY 337
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +3
Query: 375 HRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRK 482
H + V+ +A HP SG+ D ++++W + K
Sbjct: 294 HNEIVTCVAFHPIDDRYFVSGSLDCKIQLWSILRHK 329
>SPBC211.05 |||splicing factor 3B|Schizosaccharomyces pombe|chr
2|||Manual
Length = 85
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 324 VKLERVFAKPFIGCLDGHRDGVSTMAKHPSQLAVLASGAFDGEVRI 461
V + F + ++ HRD +S++ HP LA +A+ + V++
Sbjct: 19 VGVGNAFTTKYEWMVNQHRDTLSSVVGHPPLLAYMATALGEPRVQV 64
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 25.8 bits (54), Expect = 6.7
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Frame = +2
Query: 530 YNPDGKHFMSVGDDKTIKTW------KAEAVTEED------EEPTNTLLSMSVVSGITHH 673
+NP ++G ++ ++ W K+ T ED + P+ L + +S H
Sbjct: 283 HNPSIATLFALGSEQDLQLWDLRNLNKSVFNTSEDLSDNRLKVPSRLTLGGTSLSWSWRH 342
Query: 674 RNKPIFATCGEQCQLWENTRNEPIKF 751
+ I + C E C +W + P++F
Sbjct: 343 SGR-IVSACQEYCYVWNFNKANPLEF 367
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 25.8 bits (54), Expect = 6.7
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTW 589
+ L ++ DG + +S G+D ++ W
Sbjct: 301 ISCLSFSQDGNYLLSRGEDNALRVW 325
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +3
Query: 366 LDGHRDGVSTMAKHPSQLAVLASGAFDGEVRIWDLTVRKCTRNFVAH 506
LD H + MA P+ + S A D V+IWDL AH
Sbjct: 345 LDEHIRQIVAMAWSPNGYQLATSSA-DDTVKIWDLRKVSLAHTIPAH 390
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 25.4 bits (53), Expect = 8.9
Identities = 7/28 (25%), Positives = 16/28 (57%)
Frame = +2
Query: 509 GWVRALCYNPDGKHFMSVGDDKTIKTWK 592
G + + +PD F+++G D ++ W+
Sbjct: 1216 GGTKKVLVSPDSSFFVTLGSDGVVRAWQ 1243
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +2
Query: 509 GWVRALCYNPDGKHFMSVGDDKTIKTWKAEAVTEEDEEPTNTLLSMSV 652
GWV A+ ++P G G D ++ A E+P L+++ +
Sbjct: 206 GWVHAVGFSPSGNALAYAGHDSSVTI----AYPSAPEQPPRALITVKL 249
>SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTWK 592
V ++ +P F+S +DKT+K WK
Sbjct: 111 VSSIEVSPIEDQFVSTANDKTLKLWK 136
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 515 VRALCYNPDGKHFMSVGDDKTIKTW 589
V + +NP+G + GD+ TI W
Sbjct: 70 VNVVRFNPEGNILATAGDEGTIMLW 94
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 297 GVLLVDASSGHSCEDFLNISFRSAQIIFWVTTYNF 193
GV++ +SGH E+ + S ++A+ IF+ T +F
Sbjct: 316 GVIVGYDASGHIAEETKDASIKAARGIFYSTVTSF 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,114,950
Number of Sequences: 5004
Number of extensions: 63249
Number of successful extensions: 390
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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