Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30581
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   0.99 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   9.2  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 481 YPIL*TEWYKLTSP*IRHYGSSRSFNGAFRY 573
           +P+   EW K+    ++HY S+   +   RY
Sbjct: 116 WPLFLNEWTKIEINLLKHYQSTTDLHKKIRY 146


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 357 LGIVDENVEFAIKTVILQLRNVSLNVNW 274
           LGI+D  V F I  +  ++   S N+N+
Sbjct: 333 LGILDAIVTFLIVMIQFEMTQNSTNINF 360


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 357 LGIVDENVEFAIKTVILQLRNVSLNVN 277
           LGI+D  V F I  +  ++   S N+N
Sbjct: 333 LGILDAIVTFLIVMIQFEMTQNSTNIN 359


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 581 CLWYLKAPLKDRED 540
           C WY+   L+ R+D
Sbjct: 460 CFWYVPKSLRGRKD 473


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,330
Number of Sequences: 336
Number of extensions: 3092
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)