Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30580
(764 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 6e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 8e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 8e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 2e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 182 3e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 182 3e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 182 3e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 181 4e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 181 4e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 163 9e-41
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 157 8e-39
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 155 3e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 109 1e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 2e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 80 1e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 67 1e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 62 4e-10
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 51 7e-07
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 51 7e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 4e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.12
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.64
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 31 0.64
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 30 1.5
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 2.4
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 2.6
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 2.6
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 3.4
At3g28790.1 68416.m03593 expressed protein 29 3.4
At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, ... 29 3.4
At1g70080.1 68414.m08063 terpene synthase/cyclase family protein... 29 3.4
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 29 3.4
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 29 3.4
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 4.5
At1g58370.1 68414.m06640 glycosyl hydrolase family 10 protein / ... 29 4.5
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 4.5
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 4.5
At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family p... 28 5.9
At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family p... 28 5.9
At4g13350.2 68417.m02088 human Rev interacting-like protein-rela... 28 5.9
At4g13350.1 68417.m02087 human Rev interacting-like protein-rela... 28 5.9
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 28 5.9
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 28 5.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 6e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLS 143
Score = 171 bits (417), Expect = 3e-43
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 203
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
T+AEREIVRD+KEKL Y+ALD+EQE
Sbjct: 204 TSAEREIVRDVKEKLAYIALDYEQE 228
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 8e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLS 143
Score = 171 bits (416), Expect = 4e-43
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFT
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFT 203
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
TTAEREIVRD+KEKL Y+ALDFEQE
Sbjct: 204 TTAEREIVRDMKEKLSYIALDFEQE 228
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 8e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLS 143
Score = 170 bits (413), Expect = 1e-42
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFT
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFT 203
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
TTAEREIVRD+KEKL Y+ALD+EQE
Sbjct: 204 TTAEREIVRDMKEKLSYIALDYEQE 228
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN PAMYVAIQAVLS
Sbjct: 119 EKMTQIMFETFNVPAMYVAIQAVLS 143
Score = 168 bits (409), Expect = 3e-42
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FT
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFT 203
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
TTAEREIVRDIKEKL YVALD+EQE
Sbjct: 204 TTAEREIVRDIKEKLAYVALDYEQE 228
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 182 bits (442), Expect = 3e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLS 143
Score = 166 bits (403), Expect = 2e-41
Identities = 78/85 (91%), Positives = 83/85 (97%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FT
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFT 203
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
TTAEREIVRDIKEKL +VA+D+EQE
Sbjct: 204 TTAEREIVRDIKEKLSFVAVDYEQE 228
Score = 97.5 bits (232), Expect = 9e-21
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG+ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 182 bits (442), Expect = 3e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLS 143
Score = 166 bits (403), Expect = 2e-41
Identities = 78/85 (91%), Positives = 83/85 (97%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FT
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFT 203
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
TTAEREIVRDIKEKL +VA+D+EQE
Sbjct: 204 TTAEREIVRDIKEKLSFVAVDYEQE 228
Score = 97.5 bits (232), Expect = 9e-21
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG+ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 182 bits (442), Expect = 3e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLS 143
Score = 166 bits (403), Expect = 2e-41
Identities = 78/85 (91%), Positives = 83/85 (97%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FT
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFT 203
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
TTAEREIVRDIKEKL +VA+D+EQE
Sbjct: 204 TTAEREIVRDIKEKLSFVAVDYEQE 228
Score = 97.5 bits (232), Expect = 9e-21
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG+ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 181 bits (441), Expect = 4e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN PAMYVAIQAVLS
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLS 143
Score = 173 bits (422), Expect = 8e-44
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFT
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFT 203
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
TTAEREIVRDIKEKLCY+ALD+EQE
Sbjct: 204 TTAEREIVRDIKEKLCYIALDYEQE 228
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 181 bits (441), Expect = 4e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANR
Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFN PAMYVAIQAVLS
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLS 143
Score = 173 bits (422), Expect = 8e-44
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFT
Sbjct: 144 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFT 203
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
TTAEREIVRDIKEKLCY+ALD+EQE
Sbjct: 204 TTAEREIVRDIKEKLCYIALDYEQE 228
Score = 101 bits (243), Expect = 4e-22
Identities = 45/59 (76%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 163 bits (397), Expect = 9e-41
Identities = 70/85 (82%), Positives = 80/85 (94%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NR
Sbjct: 60 EAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNR 119
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFE+F P+MY+ IQAVLS
Sbjct: 120 EKMTQIMFESFAFPSMYIGIQAVLS 144
Score = 163 bits (397), Expect = 9e-41
Identities = 74/85 (87%), Positives = 83/85 (97%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++T
Sbjct: 145 LYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYT 204
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
T+AEREIVRDIKEKLCY+A+D+EQE
Sbjct: 205 TSAEREIVRDIKEKLCYIAVDYEQE 229
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/59 (69%), Positives = 52/59 (88%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VG+ +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 157 bits (381), Expect = 8e-39
Identities = 70/85 (82%), Positives = 81/85 (95%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++T
Sbjct: 133 LYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYT 192
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
T+AEREIVRDIKEKLCYVALD+EQE
Sbjct: 193 TSAEREIVRDIKEKLCYVALDYEQE 217
Score = 152 bits (369), Expect = 2e-37
Identities = 71/98 (72%), Positives = 80/98 (81%)
Frame = +3
Query: 213 RDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 392
RDG E + E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 393 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 506
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVL 131
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRA 267
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVGE A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 155 bits (376), Expect = 3e-38
Identities = 66/85 (77%), Positives = 79/85 (92%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+R
Sbjct: 14 DAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADR 73
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETF P+MY+ +QA LS
Sbjct: 74 EKMTQIMFETFAVPSMYIGMQAALS 98
Score = 134 bits (325), Expect = 5e-32
Identities = 66/85 (77%), Positives = 75/85 (88%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
L+ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY
Sbjct: 99 LHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY--- 155
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
T+AERE+VRDIKE+ Y+ALD+EQE
Sbjct: 156 TSAEREVVRDIKEQFGYIALDYEQE 180
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 109 bits (263), Expect = 1e-24
Identities = 45/85 (52%), Positives = 66/85 (77%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+
Sbjct: 143 LYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMN 202
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
TA+ E VR+IKEKLCY++ D+++E
Sbjct: 203 KTADFETVREIKEKLCYISYDYKRE 227
Score = 103 bits (246), Expect = 2e-22
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +3
Query: 279 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 458
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 459 ETFNTPAMYVAIQAVLS 509
E +N +++ IQAVL+
Sbjct: 126 EKYNFAGVFIQIQAVLT 142
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGE 255
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VGE
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +3
Query: 285 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 464
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 465 FNTPAMYVAIQAVLS 509
FN P +Y+A+ +VL+
Sbjct: 146 FNVPGLYIAVNSVLA 160
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/78 (35%), Positives = 47/78 (60%)
Frame = +2
Query: 530 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 709
TG+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDV 232
Query: 710 VRDIKEKLCYVALDFEQE 763
R +KE CY D +E
Sbjct: 233 ARKVKEMYCYTCSDIVKE 250
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 106 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 192
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.2 bits (189), Expect = 1e-15
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +3
Query: 267 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 446
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 447 QIMFETFNTPAMYVAIQAVLS 509
++MFE + PA+++A VL+
Sbjct: 145 ELMFEKYKVPALFMAKNPVLT 165
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 195
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 512 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 676
+A+GR T +V+D G G + P+++GY L A++ L G LTD L+K L +G
Sbjct: 167 FATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/100 (36%), Positives = 54/100 (54%)
Frame = +2
Query: 452 HVRNIQHARHVRRHPSRALLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 631
H +++ H R P L S +V+D G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSIL---SKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 632 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 751
+ T+YL ++++ R S E +V D KEKLC+V+LD
Sbjct: 187 KAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLD 224
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +3
Query: 285 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 464
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 465 FNTPAMYVA 491
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 201
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 267 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 440
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 195
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 470
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 471 TPAMYVAIQAVLS 509
Y + QAVLS
Sbjct: 117 VSGFYASEQAVLS 129
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYSF 685
LYA+ RT+GIV++ G V +PI G + + + LT +L + + E SF
Sbjct: 244 LYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISF 303
Query: 686 TTTAEREIVRDIKEKLCYVALDFEQE 763
+ VR +KEKLCYVALD++ E
Sbjct: 304 QSLYT---VRTLKEKLCYVALDYKAE 326
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYSF 685
LYA+ RT+GIV++ G V +PI G + + + LT +L + + E SF
Sbjct: 244 LYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISF 303
Query: 686 TTTAEREIVRDIKEKLCYVALDFEQE 763
+ VR +KEKLCYVALD++ E
Sbjct: 304 QSLYT---VRTLKEKLCYVALDYKAE 326
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 470
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 471 TPAMYVAIQAVLS 509
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Frame = +2
Query: 509 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 688
L+ + GIVL G +H++P +G + R ++ G +TDYL ++L+ + +
Sbjct: 163 LHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHS 222
Query: 689 TTAEREIVRDIKEKLCYVALDFEQE 763
+ E D+K + CY+A D+ E
Sbjct: 223 SRFTWEKAEDLKLEHCYIAPDYASE 247
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 230 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 93
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +2
Query: 407 GSPQPQGQQREDDPDHV---RNIQHARHVRRHPSRALLY 514
GSP+ +G + E+D D + NI+H + +H + A+LY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 498 AVLSCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 611
+V S T PV PP TP+ SPTP P + +PTPS
Sbjct: 89 SVPSPTPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 125
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 498 AVLSCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 611
+V S T PV PP TP+ SPTP P + +PTPS
Sbjct: 107 SVPSPTPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 143
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 498 AVLSCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 611
+V S T PV PP TP+ SPTP P + +PTPS
Sbjct: 125 SVPSPTPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 161
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 498 AVLSCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 608
+V S T PV PP TP+ SPTP T SP P
Sbjct: 143 SVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 507 SCTRPVVPP-VSCWTPATVSPTPCPSTRDT-HSPTPSC 614
+C R +PP +SC TP PCP + HS T C
Sbjct: 639 ACGRTSIPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 2.4
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 206 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 120
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 2.4
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 395 DGVFLGGDTQLIVEGMMPNLLHVIPVS 315
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 528 PPVSCWTPATVSPTPCPSTRDTHSPTP 608
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 528 PPVSCWTPATVSPTPCPSTRDTHSPTP 608
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 519 PVVPPVSCWTPATVSPTPCPSTRDTHSPTP 608
P PP S TP SP P P + SPTP
Sbjct: 230 PGPPPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 528 PPVSCWTPATVSP-TPCPSTRDTHSPTPS 611
P S TP+T +P TP PST +PTPS
Sbjct: 281 PTPSTPTPSTPTPSTPTPSTPTPSTPTPS 309
>At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit, Arabidopsis thaliana (Ath-A)
Length = 1088
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/78 (29%), Positives = 32/78 (41%)
Frame = +2
Query: 368 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALLYASGRTTGIVLD 547
AC GT GSP+ +G + +DD D + + + H + A LY TG
Sbjct: 80 ACPQCGTRYKRIKGSPRVEGDEEDDDIDDLEHEFYGMD-PEHVTEAALYYMRLNTG---R 135
Query: 548 SGDGVSHTVPIYEGYALP 601
D VSH G +P
Sbjct: 136 GTDEVSHLYSASPGSEVP 153
>At1g70080.1 68414.m08063 terpene synthase/cyclase family protein
similar to (+)-delta-cadinene synthase [Gossypium
hirsutum][GI:8389329], sesquiterpene synthases
[GI:11934937][Lycopersicon hirsutum],
[GI:11934933][Lycopersicon esculentum]; contains Pfam
profile: PF01397: Terpene synthase family
Length = 611
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 483 YVAIQAVLSCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 620
Y +++ LS +R P C AT +PT ST + +P P +W
Sbjct: 31 YPLLKSSLSFSRFQSPKKLCLVRATTNPTDDNSTTRSFTPHPPSLW 76
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 513 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 620
T P P PA V P P P + +P P +W
Sbjct: 92 TAPAPAPAQAQAPALVRPAPVPVLVSSSAPQPMPMW 127
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +3
Query: 390 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPT 569
P L+T+ P++PK Q +T A Q L+ P PP P P
Sbjct: 191 PQLVTKEPISPKPLSSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPP-----PPPPPPP 245
Query: 570 PCPSTRDTHSPTPS 611
P P+T + P+
Sbjct: 246 PSPTTAAKRNADPA 259
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 513 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 617
T PVV P + P PTP P +PTP V
Sbjct: 191 TPPVVTPPTPTPPVITPPTPTPPVITPPTPTPPVV 225
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 513 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 617
T PVV P + P PTP P +PTP +
Sbjct: 171 TPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVI 205
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 513 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 617
T PV+ P + P PTP P +PTP +
Sbjct: 181 TPPVITPPTPTPPVVTPPTPTPPVITPPTPTPPVI 215
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 513 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 617
T PV+ P + P PTP P +PTP V
Sbjct: 201 TPPVITPPTPTPPVITPPTPTPPVVTPPTPTPPVV 235
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 513 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 608
T PV+ P + P PTP P +PTP
Sbjct: 211 TPPVITPPTPTPPVVTPPTPTPPVVTPPTPTP 242
>At1g58370.1 68414.m06640 glycosyl hydrolase family 10 protein /
carbohydrate-binding domain-containing protein similar
to (1,4)-beta-xylan endohydrolase GI:5306060 from
[Triticum aestivum] ; contains Pfam profiles PF00331:
Glycosyl hydrolase family 10, PF02018: Carbohydrate
binding domain
Length = 917
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 425 GQQREDDPDHVRNIQHARHVRRHPSRALLYASGRTTGIVL 544
G Q E + D I + + ++PS+AL+Y G ++GI L
Sbjct: 478 GGQVEINDDRWHEIGGSFRIEKNPSKALVYVQGPSSGIDL 517
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 279 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 440
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 279 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 440
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 385
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 565 PHRAHLRGIRTPPRHPASGLGRS*PHRLPHEDPHRARLLVHYHRRAGNR 711
PHRA RG R P +G R+ + P R++ +Y R +R
Sbjct: 205 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDR 253
>At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 393
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 565 PHRAHLRGIRTPPRHPASGLGRS*PHRLPHEDPHRARLLVHYHRRAGNR 711
PHRA RG R P +G R+ + P R++ +Y R +R
Sbjct: 213 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDR 261
>At4g13350.2 68417.m02088 human Rev interacting-like protein-related
/ hRIP protein-related similar to SP|P52594
Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
(Rev interacting protein) (Rev/Rex activation
domain-binding protein) {Homo sapiens}; contains Pfam
profile PF01412: Putative GTPase activating protein for
Arf
Length = 602
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 441 MTQIMFET-FNTPAMYVAIQAVLSCT-RPVVPPVSCWTP--ATVSPTPCPSTRDTHSPTP 608
++ I F+T F TPA VAIQA LS T +P P + A+ P + + P P
Sbjct: 282 LSLIDFDTDFETPAPSVAIQAPLSTTSQPAPQPTTSSNDNWASFDAAPSAPSLNVSQPPP 341
Query: 609 S 611
S
Sbjct: 342 S 342
>At4g13350.1 68417.m02087 human Rev interacting-like protein-related
/ hRIP protein-related similar to SP|P52594
Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)
(Rev interacting protein) (Rev/Rex activation
domain-binding protein) {Homo sapiens}; contains Pfam
profile PF01412: Putative GTPase activating protein for
Arf
Length = 602
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 441 MTQIMFET-FNTPAMYVAIQAVLSCT-RPVVPPVSCWTP--ATVSPTPCPSTRDTHSPTP 608
++ I F+T F TPA VAIQA LS T +P P + A+ P + + P P
Sbjct: 282 LSLIDFDTDFETPAPSVAIQAPLSTTSQPAPQPTTSSNDNWASFDAAPSAPSLNVSQPPP 341
Query: 609 S 611
S
Sbjct: 342 S 342
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 525 VPPVSCWTPATVSPTPCPSTRDTHSPTPS 611
+PPV+ TP+ ++ P P T +PT S
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 529 HRYRAGLRRRCL-PHRAHLRGIRTPPRHPASG 621
+ ++AG R R L P + L +R PPR PA+G
Sbjct: 601 YTFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,593,852
Number of Sequences: 28952
Number of extensions: 415268
Number of successful extensions: 1570
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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