Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30579
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   173   2e-43
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   173   2e-43
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   173   2e-43
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   173   2e-43
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   173   2e-43
AE014134-3223|ABC65920.1|  308|Drosophila melanogaster CG40176-P...    30   2.7  

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  173 bits (421), Expect = 2e-43
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = -2

Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
           VS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFP
Sbjct: 273 VSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFP 332

Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL 251
           HYGEVNNDFVMIKGCC+G KKRIITL
Sbjct: 333 HYGEVNNDFVMIKGCCIGSKKRIITL 358



 Score =  116 bits (280), Expect = 2e-26
 Identities = 52/68 (76%), Positives = 54/68 (79%)
 Frame = -3

Query: 711 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVAC 532
           VKWAREHLEKPI V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVAC
Sbjct: 205 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 264

Query: 531 IGAWHPSR 508
           IGAWHPSR
Sbjct: 265 IGAWHPSR 272



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 51/83 (61%), Positives = 57/83 (68%)
 Frame = -1

Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
           G FP        F   +G   G+ K    LRKSL  HTKR+ALE+I LKFIDTSSK GHG
Sbjct: 329 GGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHG 388

Query: 161 RFQTPADKAAFMGTLKKDRIREE 93
           RFQTPADK AFMG LKKDR++EE
Sbjct: 389 RFQTPADKLAFMGPLKKDRLKEE 411


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  173 bits (421), Expect = 2e-43
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = -2

Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
           VS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFP
Sbjct: 262 VSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFP 321

Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL 251
           HYGEVNNDFVMIKGCC+G KKRIITL
Sbjct: 322 HYGEVNNDFVMIKGCCIGSKKRIITL 347



 Score =  116 bits (280), Expect = 2e-26
 Identities = 52/68 (76%), Positives = 54/68 (79%)
 Frame = -3

Query: 711 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVAC 532
           VKWAREHLEKPI V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVAC
Sbjct: 194 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 253

Query: 531 IGAWHPSR 508
           IGAWHPSR
Sbjct: 254 IGAWHPSR 261



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 51/83 (61%), Positives = 57/83 (68%)
 Frame = -1

Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
           G FP        F   +G   G+ K    LRKSL  HTKR+ALE+I LKFIDTSSK GHG
Sbjct: 318 GGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHG 377

Query: 161 RFQTPADKAAFMGTLKKDRIREE 93
           RFQTPADK AFMG LKKDR++EE
Sbjct: 378 RFQTPADKLAFMGPLKKDRLKEE 400


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  173 bits (421), Expect = 2e-43
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = -2

Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
           VS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFP
Sbjct: 249 VSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFP 308

Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL 251
           HYGEVNNDFVMIKGCC+G KKRIITL
Sbjct: 309 HYGEVNNDFVMIKGCCIGSKKRIITL 334



 Score =  116 bits (280), Expect = 2e-26
 Identities = 52/68 (76%), Positives = 54/68 (79%)
 Frame = -3

Query: 711 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVAC 532
           VKWAREHLEKPI V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVAC
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 240

Query: 531 IGAWHPSR 508
           IGAWHPSR
Sbjct: 241 IGAWHPSR 248



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 51/83 (61%), Positives = 57/83 (68%)
 Frame = -1

Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
           G FP        F   +G   G+ K    LRKSL  HTKR+ALE+I LKFIDTSSK GHG
Sbjct: 305 GGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHG 364

Query: 161 RFQTPADKAAFMGTLKKDRIREE 93
           RFQTPADK AFMG LKKDR++EE
Sbjct: 365 RFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  173 bits (421), Expect = 2e-43
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = -2

Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
           VS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFP
Sbjct: 249 VSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFP 308

Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL 251
           HYGEVNNDFVMIKGCC+G KKRIITL
Sbjct: 309 HYGEVNNDFVMIKGCCIGSKKRIITL 334



 Score =  116 bits (280), Expect = 2e-26
 Identities = 52/68 (76%), Positives = 54/68 (79%)
 Frame = -3

Query: 711 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVAC 532
           VKWAREHLEKPI V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVAC
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 240

Query: 531 IGAWHPSR 508
           IGAWHPSR
Sbjct: 241 IGAWHPSR 248



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 51/83 (61%), Positives = 57/83 (68%)
 Frame = -1

Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
           G FP        F   +G   G+ K    LRKSL  HTKR+ALE+I LKFIDTSSK GHG
Sbjct: 305 GGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHG 364

Query: 161 RFQTPADKAAFMGTLKKDRIREE 93
           RFQTPADK AFMG LKKDR++EE
Sbjct: 365 RFQTPADKLAFMGPLKKDRLKEE 387


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  173 bits (421), Expect = 2e-43
 Identities = 78/86 (90%), Positives = 82/86 (95%)
 Frame = -2

Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
           VS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFP
Sbjct: 262 VSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFP 321

Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL 251
           HYGEVNNDFVMIKGCC+G KKRIITL
Sbjct: 322 HYGEVNNDFVMIKGCCIGSKKRIITL 347



 Score =  116 bits (280), Expect = 2e-26
 Identities = 52/68 (76%), Positives = 54/68 (79%)
 Frame = -3

Query: 711 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVAC 532
           VKWAREHLEKPI V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVAC
Sbjct: 194 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVAC 253

Query: 531 IGAWHPSR 508
           IGAWHPSR
Sbjct: 254 IGAWHPSR 261



 Score = 96.7 bits (230), Expect = 3e-20
 Identities = 51/83 (61%), Positives = 57/83 (68%)
 Frame = -1

Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
           G FP        F   +G   G+ K    LRKSL  HTKR+ALE+I LKFIDTSSK GHG
Sbjct: 318 GGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHG 377

Query: 161 RFQTPADKAAFMGTLKKDRIREE 93
           RFQTPADK AFMG LKKDR++EE
Sbjct: 378 RFQTPADKLAFMGPLKKDRLKEE 400


>AE014134-3223|ABC65920.1|  308|Drosophila melanogaster CG40176-PA
           protein.
          Length = 308

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -3

Query: 570 PRKTHKGLRKVACIGAWHPSRC 505
           P K  KGL +VA +GAW P RC
Sbjct: 108 PEKVKKGLTEVAGVGAW-PGRC 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,602,608
Number of Sequences: 53049
Number of extensions: 733677
Number of successful extensions: 1791
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)