Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30579
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 126 2e-29
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 126 2e-29
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 126 2e-29
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 126 2e-29
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 126 2e-29
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 126 2e-29
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 126 2e-29
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 126 2e-29
U23510-14|AAO38611.1| 199|Caenorhabditis elegans Hypothetical p... 28 7.6
U23510-13|AAK71392.2| 425|Caenorhabditis elegans Hypothetical p... 28 7.6
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 126 bits (303), Expect = 2e-29
Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Frame = -2
Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
V+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP
Sbjct: 262 VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFP 318
Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL-ESLCVFIQRGLH*K 209
YG VN D++M++G +GPKKR+ITL +SL +R H K
Sbjct: 319 RYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEK 359
Score = 111 bits (266), Expect = 6e-25
Identities = 51/68 (75%), Positives = 53/68 (77%)
Frame = -3
Query: 711 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVAC 532
V WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGLRKVAC
Sbjct: 194 VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC 253
Query: 531 IGAWHPSR 508
IGAWHPSR
Sbjct: 254 IGAWHPSR 261
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = -1
Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
G FP Q + +G + G K LRKSL TKR A EKINLK+IDTSSK GHG
Sbjct: 315 GGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHG 374
Query: 161 RFQTPADKAAFMGTLKKDRIRE 96
RFQT A+K AFMG LK+D + E
Sbjct: 375 RFQTTAEKRAFMGKLKRDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 126 bits (303), Expect = 2e-29
Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Frame = -2
Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
V+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP
Sbjct: 262 VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFP 318
Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL-ESLCVFIQRGLH*K 209
YG VN D++M++G +GPKKR+ITL +SL +R H K
Sbjct: 319 RYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEK 359
Score = 111 bits (266), Expect = 6e-25
Identities = 51/68 (75%), Positives = 53/68 (77%)
Frame = -3
Query: 711 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVAC 532
V WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGLRKVAC
Sbjct: 194 VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC 253
Query: 531 IGAWHPSR 508
IGAWHPSR
Sbjct: 254 IGAWHPSR 261
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = -1
Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
G FP Q + +G + G K LRKSL TKR A EKINLK+IDTSSK GHG
Sbjct: 315 GGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHG 374
Query: 161 RFQTPADKAAFMGTLKKDRIRE 96
RFQT A+K AFMG LK+D + E
Sbjct: 375 RFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 126 bits (303), Expect = 2e-29
Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Frame = -2
Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
V+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP
Sbjct: 164 VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFP 220
Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL-ESLCVFIQRGLH*K 209
YG VN D++M++G +GPKKR+ITL +SL +R H K
Sbjct: 221 RYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEK 261
Score = 111 bits (266), Expect = 6e-25
Identities = 51/68 (75%), Positives = 53/68 (77%)
Frame = -3
Query: 711 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVAC 532
V WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGLRKVAC
Sbjct: 96 VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC 155
Query: 531 IGAWHPSR 508
IGAWHPSR
Sbjct: 156 IGAWHPSR 163
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = -1
Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
G FP Q + +G + G K LRKSL TKR A EKINLK+IDTSSK GHG
Sbjct: 217 GGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHG 276
Query: 161 RFQTPADKAAFMGTLKKDRIRE 96
RFQT A+K AFMG LK+D + E
Sbjct: 277 RFQTTAEKRAFMGKLKRDFLAE 298
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 126 bits (303), Expect = 2e-29
Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Frame = -2
Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
V+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP
Sbjct: 214 VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFP 270
Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL-ESLCVFIQRGLH*K 209
YG VN D++M++G +GPKKR+ITL +SL +R H K
Sbjct: 271 RYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEK 311
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = -1
Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
G FP Q + +G + G K LRKSL TKR A EKINLK+IDTSSK GHG
Sbjct: 267 GGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHG 326
Query: 161 RFQTPADKAAFMGTLKKDRIRE 96
RFQT A+K AFMG LK+D + E
Sbjct: 327 RFQTTAEKRAFMGKLKRDFLAE 348
Score = 77.8 bits (183), Expect = 7e-15
Identities = 36/52 (69%), Positives = 37/52 (71%)
Frame = -3
Query: 663 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 508
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 213
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 126 bits (303), Expect = 2e-29
Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Frame = -2
Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
V+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP
Sbjct: 262 VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFP 318
Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL-ESLCVFIQRGLH*K 209
YG VN D++M++G +GPKKR+ITL +SL +R H K
Sbjct: 319 RYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEK 359
Score = 111 bits (266), Expect = 6e-25
Identities = 51/68 (75%), Positives = 53/68 (77%)
Frame = -3
Query: 711 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVAC 532
V WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGLRKVAC
Sbjct: 194 VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC 253
Query: 531 IGAWHPSR 508
IGAWHPSR
Sbjct: 254 IGAWHPSR 261
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = -1
Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
G FP Q + +G + G K LRKSL TKR A EKINLK+IDTSSK GHG
Sbjct: 315 GGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHG 374
Query: 161 RFQTPADKAAFMGTLKKDRIRE 96
RFQT A+K AFMG LK+D + E
Sbjct: 375 RFQTTAEKRAFMGKLKRDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 126 bits (303), Expect = 2e-29
Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Frame = -2
Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
V+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP
Sbjct: 164 VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFP 220
Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL-ESLCVFIQRGLH*K 209
YG VN D++M++G +GPKKR+ITL +SL +R H K
Sbjct: 221 RYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEK 261
Score = 111 bits (266), Expect = 6e-25
Identities = 51/68 (75%), Positives = 53/68 (77%)
Frame = -3
Query: 711 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVAC 532
V WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGLRKVAC
Sbjct: 96 VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC 155
Query: 531 IGAWHPSR 508
IGAWHPSR
Sbjct: 156 IGAWHPSR 163
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = -1
Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
G FP Q + +G + G K LRKSL TKR A EKINLK+IDTSSK GHG
Sbjct: 217 GGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHG 276
Query: 161 RFQTPADKAAFMGTLKKDRIRE 96
RFQT A+K AFMG LK+D + E
Sbjct: 277 RFQTTAEKRAFMGKLKRDFLAE 298
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 126 bits (303), Expect = 2e-29
Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Frame = -2
Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
V+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP
Sbjct: 214 VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFP 270
Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL-ESLCVFIQRGLH*K 209
YG VN D++M++G +GPKKR+ITL +SL +R H K
Sbjct: 271 RYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEK 311
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = -1
Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
G FP Q + +G + G K LRKSL TKR A EKINLK+IDTSSK GHG
Sbjct: 267 GGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHG 326
Query: 161 RFQTPADKAAFMGTLKKDRIRE 96
RFQT A+K AFMG LK+D + E
Sbjct: 327 RFQTTAEKRAFMGKLKRDFLAE 348
Score = 77.8 bits (183), Expect = 7e-15
Identities = 36/52 (69%), Positives = 37/52 (71%)
Frame = -3
Query: 663 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 508
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 213
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 126 bits (303), Expect = 2e-29
Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Frame = -2
Query: 508 VSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFP 329
V+FTVARAGQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP
Sbjct: 262 VAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFP 318
Query: 328 HYGEVNNDFVMIKGCCMGPKKRIITL-ESLCVFIQRGLH*K 209
YG VN D++M++G +GPKKR+ITL +SL +R H K
Sbjct: 319 RYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEK 359
Score = 111 bits (266), Expect = 6e-25
Identities = 51/68 (75%), Positives = 53/68 (77%)
Frame = -3
Query: 711 VKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVAC 532
V WAREHLEK + VD+VFAQDEMID I TSRWHTKKLPRKTHKGLRKVAC
Sbjct: 194 VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVAC 253
Query: 531 IGAWHPSR 508
IGAWHPSR
Sbjct: 254 IGAWHPSR 261
Score = 79.8 bits (188), Expect = 2e-15
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = -1
Query: 341 GRFPPLW*SKQRFCDDQGLLHGT*KAYHYLRKSLRVHTKRAALEKINLKFIDTSSKFGHG 162
G FP Q + +G + G K LRKSL TKR A EKINLK+IDTSSK GHG
Sbjct: 315 GGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHG 374
Query: 161 RFQTPADKAAFMGTLKKDRIRE 96
RFQT A+K AFMG LK+D + E
Sbjct: 375 RFQTTAEKRAFMGKLKRDFLAE 396
>U23510-14|AAO38611.1| 199|Caenorhabditis elegans Hypothetical
protein R12C12.8b protein.
Length = 199
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 21 HCQMFIFTDDT*GCAARWGCGSRSFFANTILLECTHECSLVSRRLESTMTELGRGVNEFE 200
H MF F D+ A R C S + N C +V++ L+ TM +G + E
Sbjct: 115 HPLMFSFADENCPKACRLSCSSLCQYHNVWRTRIIGNCCIVNQMLDRTMM-IGASRSPAE 173
Query: 201 VDLF*CSPLCMN 236
++ LC N
Sbjct: 174 LNCTSTWLLCYN 185
>U23510-13|AAK71392.2| 425|Caenorhabditis elegans Hypothetical
protein R12C12.8a protein.
Length = 425
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 21 HCQMFIFTDDT*GCAARWGCGSRSFFANTILLECTHECSLVSRRLESTMTELGRGVNEFE 200
H MF F D+ A R C S + N C +V++ L+ TM +G + E
Sbjct: 341 HPLMFSFADENCPKACRLSCSSLCQYHNVWRTRIIGNCCIVNQMLDRTMM-IGASRSPAE 399
Query: 201 VDLF*CSPLCMN 236
++ LC N
Sbjct: 400 LNCTSTWLLCYN 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,311,499
Number of Sequences: 27780
Number of extensions: 379693
Number of successful extensions: 981
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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