Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30575
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   146   2e-37
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   146   2e-37
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   131   5e-33
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.16 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.5  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.1  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  146 bits (353), Expect = 2e-37
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = +3

Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
           EPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD
Sbjct: 3   EPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 62

Query: 435 NRMVNHFVQEFKRKYKKDLATNKRAL 512
           NR+V +  Q+FK+K+K D++ N RAL
Sbjct: 63  NRLVEYCTQDFKKKHKADISGNPRAL 88



 Score =  130 bits (313), Expect = 2e-32
 Identities = 60/85 (70%), Positives = 76/85 (89%)
 Frame = +2

Query: 506 SLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVE 685
           +LRRLRT CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+
Sbjct: 87  ALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVD 146

Query: 686 KSLRDAKMDKAQIHDIVLVGGSTRI 760
           K L+DAK+ K+ +H+IVLVGGSTRI
Sbjct: 147 KVLQDAKIGKSAVHEIVLVGGSTRI 171


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  146 bits (353), Expect = 2e-37
 Identities = 67/86 (77%), Positives = 77/86 (89%)
 Frame = +3

Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
           EPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD
Sbjct: 3   EPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 62

Query: 435 NRMVNHFVQEFKRKYKKDLATNKRAL 512
           NR+V +  Q+FK+K+K D++ N RAL
Sbjct: 63  NRLVEYCTQDFKKKHKADISGNPRAL 88



 Score =  130 bits (313), Expect = 2e-32
 Identities = 60/85 (70%), Positives = 76/85 (89%)
 Frame = +2

Query: 506 SLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVE 685
           +LRRLRT CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+
Sbjct: 87  ALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVD 146

Query: 686 KSLRDAKMDKAQIHDIVLVGGSTRI 760
           K L+DAK+ K+ +H+IVLVGGSTRI
Sbjct: 147 KVLQDAKIGKSAVHEIVLVGGSTRI 171


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  131 bits (317), Expect = 5e-33
 Identities = 61/108 (56%), Positives = 83/108 (76%)
 Frame = +3

Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
           EPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGEDFD
Sbjct: 3   EPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGEDFD 61

Query: 435 NRMVNHFVQEFKRKYKKDLATNKRALGVCVLHVRGQRGPCHRPHKRAL 578
            +++++F++  K+K+KKD+  +K+AL      V   +      HK  L
Sbjct: 62  QKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTL 109



 Score = 94.3 bits (224), Expect = 1e-21
 Identities = 48/99 (48%), Positives = 70/99 (70%)
 Frame = +2

Query: 464 VQEEIQKGPRYQQESLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEE 643
           V+++ +K  R  +++L++LR   E+AKR LSS  + ++ I++L    DF  ++TRA+FEE
Sbjct: 72  VKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEE 131

Query: 644 LNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 760
           LN D F  T++PV+K L DA M K QI +IVLVGGSTRI
Sbjct: 132 LNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRI 170


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 725 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 624
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 15/85 (17%), Positives = 33/85 (38%)
 Frame = -2

Query: 455 KVVDHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVS 276
           K++   I KVL  +   +G  +           G + G   +++D Y +    +  K + 
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLIQ 269

Query: 275 NRSSSRFLMIRRTFKPEMVPASFVA 201
           +  +      ++ F  + +   FVA
Sbjct: 270 SIPTHLLDSEKKNFIVDHISNQFVA 294


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 22  DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 147
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +3

Query: 93  FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 218
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 740 PVQYRGFEPYPSWHHGETSPLAP 672
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,015
Number of Sequences: 336
Number of extensions: 4213
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)