Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30575
(762 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 152 5e-38
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 148 1e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 136 4e-33
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 119 5e-28
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 109 4e-25
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 69 1e-12
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 67 3e-12
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 66 7e-12
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.96
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.3
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 27 2.2
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 5.1
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 26 5.1
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 5.1
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 5.1
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 26 5.1
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 6.7
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 25 8.9
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 8.9
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 25 8.9
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 8.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 152 bits (369), Expect = 5e-38
Identities = 69/86 (80%), Positives = 78/86 (90%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
EPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD
Sbjct: 173 EPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 232
Query: 435 NRMVNHFVQEFKRKYKKDLATNKRAL 512
+R+VNHF+QEFKRK KKD+ N RA+
Sbjct: 233 SRLVNHFIQEFKRKNKKDITGNARAV 258
Score = 148 bits (358), Expect = 1e-36
Identities = 72/85 (84%), Positives = 80/85 (94%)
Frame = +2
Query: 506 SLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVE 685
++RRLRTACERAKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE
Sbjct: 257 AVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVE 316
Query: 686 KSLRDAKMDKAQIHDIVLVGGSTRI 760
+ LRD+K+DKA +++IVLVGGSTRI
Sbjct: 317 RVLRDSKVDKASVNEIVLVGGSTRI 341
Score = 124 bits (300), Expect = 1e-29
Identities = 57/77 (74%), Positives = 66/77 (85%)
Frame = +1
Query: 1 WPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 180
WPF+V+S GKP ++V YKGE KTF PEE+SSMVL KM+ETAEAYLG V +AV+TVPAY
Sbjct: 88 WPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAY 147
Query: 181 FNDSQRQATKDAGTISG 231
FNDSQRQATKDAG I+G
Sbjct: 148 FNDSQRQATKDAGLIAG 164
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 148 bits (358), Expect = 1e-36
Identities = 68/86 (79%), Positives = 76/86 (88%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
EPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD
Sbjct: 173 EPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD 232
Query: 435 NRMVNHFVQEFKRKYKKDLATNKRAL 512
+R+VNHF QEFKRK KKD+ N RA+
Sbjct: 233 SRLVNHFAQEFKRKNKKDITGNARAV 258
Score = 147 bits (356), Expect = 2e-36
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +2
Query: 506 SLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVE 685
++RRLRTACERAKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVE
Sbjct: 257 AVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVE 316
Query: 686 KSLRDAKMDKAQIHDIVLVGGSTRI 760
K LRD+K+DK+ +++IVLVGGSTRI
Sbjct: 317 KVLRDSKIDKSSVNEIVLVGGSTRI 341
Score = 119 bits (286), Expect = 5e-28
Identities = 54/77 (70%), Positives = 65/77 (84%)
Frame = +1
Query: 1 WPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 180
WPF+V+ GKP I+V +KGE KTF PEE+SSMVL KM+E+AEA+LG V +AV+TVPAY
Sbjct: 88 WPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAY 147
Query: 181 FNDSQRQATKDAGTISG 231
FNDSQRQATKDAG I+G
Sbjct: 148 FNDSQRQATKDAGLIAG 164
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 136 bits (328), Expect = 4e-33
Identities = 70/108 (64%), Positives = 80/108 (74%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
EPTAAAIAYGLD K +NVLIFDLGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFD
Sbjct: 177 EPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFD 236
Query: 435 NRMVNHFVQEFKRKYKKDLATNKRALGVCVLHVRGQRGPCHRPHKRAL 578
N +V HF+QEFKRK K D++ + RAL R R C R KRAL
Sbjct: 237 NALVEHFIQEFKRKQKIDISDDPRAL-------RRLRSACERA-KRAL 276
Score = 123 bits (297), Expect = 2e-29
Identities = 57/85 (67%), Positives = 73/85 (85%)
Frame = +2
Query: 506 SLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVE 685
+LRRLR+ACERAKR LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV
Sbjct: 261 ALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVA 320
Query: 686 KSLRDAKMDKAQIHDIVLVGGSTRI 760
K L+D+K+ KA +HDIVLVGGSTRI
Sbjct: 321 KVLKDSKVPKADVHDIVLVGGSTRI 345
Score = 105 bits (251), Expect = 9e-24
Identities = 49/77 (63%), Positives = 60/77 (77%)
Frame = +1
Query: 1 WPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 180
WPF+V+ + G P I+V Y GE K F +E+S+MVLTKMKE +EA L K V+ AVITVPAY
Sbjct: 92 WPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAY 151
Query: 181 FNDSQRQATKDAGTISG 231
F+DSQR ATKDAG I+G
Sbjct: 152 FSDSQRAATKDAGAIAG 168
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 119 bits (286), Expect = 5e-28
Identities = 51/87 (58%), Positives = 73/87 (83%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
EPTAAAIAYGLDK T E++++++DLGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFD
Sbjct: 206 EPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFD 264
Query: 435 NRMVNHFVQEFKRKYKKDLATNKRALG 515
NR++N+ + + RK D+ + +A+G
Sbjct: 265 NRVINYLARTYNRKNNVDVTKDLKAMG 291
Score = 111 bits (266), Expect = 1e-25
Identities = 49/77 (63%), Positives = 65/77 (84%)
Frame = +1
Query: 1 WPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 180
+PF +V+D +P ++V G+ K F PEE+S+M+L+KMK+TAEAYLGK V +AV+TVPAY
Sbjct: 121 FPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAY 180
Query: 181 FNDSQRQATKDAGTISG 231
FND+QRQATKDAGTI+G
Sbjct: 181 FNDAQRQATKDAGTIAG 197
Score = 99.1 bits (236), Expect = 6e-22
Identities = 45/86 (52%), Positives = 66/86 (76%)
Frame = +2
Query: 503 ESLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 682
+++ +L+ E+AKRTLSS IEI+S F G DF +++RA+FEE+N DLF+ T++PV
Sbjct: 288 KAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPV 347
Query: 683 EKSLRDAKMDKAQIHDIVLVGGSTRI 760
E+ L+D+ + K++I DIVLVGGSTRI
Sbjct: 348 EQVLKDSNLKKSEIDDIVLVGGSTRI 373
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 109 bits (262), Expect = 4e-25
Identities = 51/86 (59%), Positives = 66/86 (76%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
EPTAAA+AYGLDKK + V +FDLGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD
Sbjct: 219 EPTAAALAYGLDKKN--DAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFD 276
Query: 435 NRMVNHFVQEFKRKYKKDLATNKRAL 512
+V H V+ FK+ DL+ ++ A+
Sbjct: 277 VALVRHIVETFKKNEGLDLSKDRLAV 302
Score = 83.4 bits (197), Expect = 3e-17
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +1
Query: 67 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 231
KT+ P ++ +L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+G
Sbjct: 156 KTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAG 210
Score = 58.0 bits (134), Expect = 1e-09
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Frame = +2
Query: 506 SLRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTM 673
+++R+R A E+AK LSS ++ I + + I+RA+FE+L L R T+
Sbjct: 301 AVQRIREAAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRAQFEKLVDPLVRRTI 360
Query: 674 EPVEKSLRDAKMDKAQIHDIVLVGGSTRI 760
+P +++L+DA + ++I++++LVGG TR+
Sbjct: 361 DPCKRALKDANLQTSEINEVILVGGMTRM 389
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 68.5 bits (160), Expect = 1e-12
Identities = 33/89 (37%), Positives = 52/89 (58%)
Frame = +2
Query: 488 PRYQQESLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRS 667
PR SL +LR CE KR LS+ T AS +DSL +GIDF++SI R R++ +
Sbjct: 277 PRKNARSLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNR 336
Query: 668 TMEPVEKSLRDAKMDKAQIHDIVLVGGST 754
+ V +++ A M+ I +++L GG++
Sbjct: 337 MADLVTEAVEKANMEPFDISEVILAGGAS 365
Score = 50.4 bits (115), Expect = 3e-07
Identities = 23/86 (26%), Positives = 49/86 (56%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
+P A +A ++ ++ V++ + G +VS+++++ G+ + ++ D +LGGE
Sbjct: 199 DPAAVILALMYSEEVLIDKTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLT 258
Query: 435 NRMVNHFVQEFKRKYKKDLATNKRAL 512
+ +VN F +EF++K D N R+L
Sbjct: 259 DVLVNFFAKEFEKKNGIDPRKNARSL 284
Score = 44.8 bits (101), Expect = 1e-05
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1
Query: 61 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 231
++K E S L ++ E+AE +LG V V++VP YF D+QR+A + A +G
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAG 190
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 66.9 bits (156), Expect = 3e-12
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +3
Query: 264 AAAIAYGLDKKGTGE----RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 431
AAA+ YG+ K E R V I D G + VSI+ G F +KST D +LG +
Sbjct: 180 AAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNM 239
Query: 432 DNRMVNHFVQEFKRKYKKDLATNKRA 509
D ++++F EFK KYK D+ +N +A
Sbjct: 240 DKALIDYFAAEFKEKYKIDVLSNPKA 265
Score = 61.3 bits (142), Expect = 1e-10
Identities = 31/82 (37%), Positives = 47/82 (57%)
Frame = +2
Query: 515 RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 694
RL TA ER K+ LS++ A + ++ + ID + I R+ FEEL L P+EK+L
Sbjct: 268 RLATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKAL 327
Query: 695 RDAKMDKAQIHDIVLVGGSTRI 760
A + K ++ I +VGG TR+
Sbjct: 328 ELAGIKKEDLYSIEMVGGCTRV 349
Score = 48.8 bits (111), Expect = 8e-07
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +1
Query: 43 KVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGT 222
KV Y E+ F ++ + TK+K AEA L +V + VI++PA+F D QR+A +A
Sbjct: 106 KVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAAN 165
Query: 223 ISG 231
I+G
Sbjct: 166 IAG 168
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 65.7 bits (153), Expect = 7e-12
Identities = 32/89 (35%), Positives = 54/89 (60%)
Frame = +2
Query: 494 YQQESLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 673
+ +L RL R K LS++++A I+ L +GIDF ITR+ E L D+ + +
Sbjct: 289 HNHRALARLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAV 348
Query: 674 EPVEKSLRDAKMDKAQIHDIVLVGGSTRI 760
EP+ K+L+ A + ++I+ I+L GG++RI
Sbjct: 349 EPINKALKKANLTFSEINSIILFGGASRI 377
Score = 32.7 bits (71), Expect = 0.059
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +1
Query: 61 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTI 225
+++ + EE+ +M + AE + + + V+TVP +FN+ QR +A I
Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARI 185
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 0.96
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 433 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 323
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 433 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 287
+ S PP P + IP PPPRS ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 27.5 bits (58), Expect = 2.2
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -1
Query: 315 HFVLQYPFCQDRKQSQQQSVLDDSENVQARDGTCIFCGLSLRVIEVRGNRDNCILHSFAK 136
H + Y C D + Q DDS+ + R G G LR I + +LH
Sbjct: 3 HLLFAYYLCNDIRSFQNLLKQDDSKVKEPRKGFSEKSGQKLR-INQKDRYGRTVLHIAVS 61
Query: 135 ISFGSFLH-FRKHHGTD 88
+ SF+ +H G D
Sbjct: 62 ENKNSFVRSLLQHKGID 78
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 728 RGFEPYPSWHHGETSPLAP 672
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 891
Score = 26.2 bits (55), Expect = 5.1
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = -3
Query: 508 ALLLVARSFLYFLLNSWTKWLTMRLSKSSPP-KWVSP--AVDFTSKIPSSMVRMDTSKVP 338
AL+ +A LY LLN K S SSPP SP FT S+ M +S P
Sbjct: 679 ALITIALDSLYVLLNMRAKSTPNSTSFSSPPTPHRSPFSGQAFTGMGLSNYSLMSSSSFP 738
Query: 337 PPRSK-ISTFRSPVPFLS 287
+S S F S P ++
Sbjct: 739 SAQSSPTSPFLSGTPSIA 756
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +3
Query: 285 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 455
LDK G+ I GG T SIL +GI VK E F+N F
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 469 LNSWTKWLTMRLSKSSPPKWVSPAVDF 389
LN K++ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 26.2 bits (55), Expect = 5.1
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 535 LTCSTQTP--KALLLVARSFLYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTS 383
L + Q+P +AL+ VAR F + LLN+ + T+R+ + V + FTS
Sbjct: 715 LIYNAQSPDEEALVKVARDFGFTLLNTKNRRYTIRIRGENKNFRVLDIIPFTS 767
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 6.7
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 587 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 745
SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 584 LSQCSLVWTMTRSSLPSHMQYANA*GSL 501
+S C ++WTM+ P HM A S+
Sbjct: 265 MSFCGVIWTMSGYDAPFHMSEETANASV 292
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +3
Query: 654 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 743
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 88 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 210
++ ++ K A LGK + FN+SQ+QAT+
Sbjct: 57 INEPIVYKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 337 AVPSTCPSLPSRMVSSR*NPPPATPTW 417
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,349,545
Number of Sequences: 5004
Number of extensions: 71294
Number of successful extensions: 290
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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