Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30575
(762 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 157 7e-39
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 155 3e-38
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 5e-37
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 123 1e-28
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 85 6e-17
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 84 1e-16
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 54 1e-07
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 52 7e-07
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 31 0.77
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.4
SB_24060| Best HMM Match : GED (HMM E-Value=0.52) 31 1.4
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.4
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 29 3.1
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 3.1
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.1
SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 5.5
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 7.2
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.5
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 157 bits (382), Expect = 7e-39
Identities = 72/86 (83%), Positives = 81/86 (94%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
EPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFD
Sbjct: 175 EPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFD 234
Query: 435 NRMVNHFVQEFKRKYKKDLATNKRAL 512
N+MV+HFV++FK+KYKKD+ NKRA+
Sbjct: 235 NKMVDHFVKQFKQKYKKDITPNKRAM 260
Score = 144 bits (348), Expect = 9e-35
Identities = 72/100 (72%), Positives = 85/100 (85%), Gaps = 2/100 (2%)
Frame = +2
Query: 467 QEEIQKGPRYQQESLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 646
+++ +K + ++RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL
Sbjct: 246 KQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 305
Query: 647 NADLFRSTMEPVEKSLRDAKM--DKAQIHDIVLVGGSTRI 760
N DLF+ T EPVE+++RD+K+ K IHDIVLVGGSTRI
Sbjct: 306 NQDLFKKTTEPVEQAIRDSKIPGGKESIHDIVLVGGSTRI 345
Score = 130 bits (313), Expect = 2e-30
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +1
Query: 1 WPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 180
WPF V+ +G +PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAY
Sbjct: 90 WPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAY 149
Query: 181 FNDSQRQATKDAGTISG 231
F+DSQRQATKDAGTI+G
Sbjct: 150 FHDSQRQATKDAGTIAG 166
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 155 bits (377), Expect = 3e-38
Identities = 72/87 (82%), Positives = 81/87 (93%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDF 431
EPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDF
Sbjct: 175 EPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDF 234
Query: 432 DNRMVNHFVQEFKRKYKKDLATNKRAL 512
DNR+VNHFV EFKRKYKKD++ N RA+
Sbjct: 235 DNRLVNHFVAEFKRKYKKDMSKNSRAM 261
Score = 135 bits (326), Expect = 4e-32
Identities = 63/98 (64%), Positives = 80/98 (81%)
Frame = +2
Query: 467 QEEIQKGPRYQQESLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 646
+ + +K ++RRLRTACERAKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE+L
Sbjct: 247 KRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDL 306
Query: 647 NADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 760
+DLF S ++PV K+L DAK K+ IH++VLVGGSTR+
Sbjct: 307 CSDLFLSCLDPVNKALSDAKFSKSDIHEVVLVGGSTRV 344
Score = 130 bits (313), Expect = 2e-30
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +1
Query: 1 WPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 180
WPF+++SD KPKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAY
Sbjct: 90 WPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAY 149
Query: 181 FNDSQRQATKDAGTISG 231
FNDSQRQATKDAGTI+G
Sbjct: 150 FNDSQRQATKDAGTIAG 166
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 151 bits (367), Expect = 5e-37
Identities = 71/86 (82%), Positives = 78/86 (90%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
EPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFD
Sbjct: 268 EPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFD 327
Query: 435 NRMVNHFVQEFKRKYKKDLATNKRAL 512
N MV+ FV++FK+KYKKD+ NKRAL
Sbjct: 328 NNMVDFFVKQFKQKYKKDITPNKRAL 353
Score = 139 bits (336), Expect = 3e-33
Identities = 67/99 (67%), Positives = 87/99 (87%), Gaps = 1/99 (1%)
Frame = +2
Query: 467 QEEIQKGPRYQQESLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 646
+++ +K + +LRRLRTACERAKRTLSSSTQASIEIDSL++GIDFYTSITRARFEE+
Sbjct: 339 KQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEM 398
Query: 647 NADLFRSTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRI 760
NA LF+ T+EPVEK+++D+K++ K +I +IV+VGGSTRI
Sbjct: 399 NAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMVGGSTRI 437
Score = 118 bits (284), Expect = 5e-27
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = +1
Query: 10 EVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFND 189
EVV++ G+PK+KV YKGE KTFF EE+SSMVL KMKETAEAYLG V +AV+TVPAYFND
Sbjct: 118 EVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFND 177
Query: 190 SQRQATKDAG 219
SQRQATKDAG
Sbjct: 178 SQRQATKDAG 187
Score = 84.6 bits (200), Expect = 8e-17
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = +1
Query: 85 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 231
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISG
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISG 259
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 123 bits (297), Expect = 1e-28
Identities = 54/86 (62%), Positives = 73/86 (84%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
EPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD
Sbjct: 873 EPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFD 931
Query: 435 NRMVNHFVQEFKRKYKKDLATNKRAL 512
++ HF++ +K+K K++ + RA+
Sbjct: 932 QNVMEHFIKLYKKKKGKNIRKDNRAV 957
Score = 111 bits (268), Expect = 5e-25
Identities = 53/77 (68%), Positives = 63/77 (81%)
Frame = +1
Query: 1 WPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 180
+PF+VV KP ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAY
Sbjct: 788 FPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAY 847
Query: 181 FNDSQRQATKDAGTISG 231
FND+QRQATKDAG I+G
Sbjct: 848 FNDAQRQATKDAGAIAG 864
Score = 110 bits (264), Expect = 1e-24
Identities = 53/93 (56%), Positives = 70/93 (75%)
Frame = +2
Query: 482 KGPRYQQESLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLF 661
K R ++++LR E+AKR LS+ QA +EI+S FEG DF +TRARFEELNA LF
Sbjct: 948 KNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLF 1007
Query: 662 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 760
+ST++PV+K L DA + K++IH+IVLVGGSTRI
Sbjct: 1008 KSTLKPVQKVLEDADLKKSEIHEIVLVGGSTRI 1040
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 85.8 bits (203), Expect = 3e-17
Identities = 36/66 (54%), Positives = 51/66 (77%)
Frame = +3
Query: 315 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 494
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 495 TNKRAL 512
+ AL
Sbjct: 62 KDSMAL 67
Score = 65.7 bits (153), Expect = 4e-11
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Frame = +2
Query: 506 SLRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTM 673
+L+RLR A E+AK LSSS Q I + + ++R++FE L ADL T+
Sbjct: 66 ALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADLINRTV 125
Query: 674 EPVEKSLRDAKMDKAQIHDIVLVGGSTRI 760
P +K L+DA+++K +I D++LVGG TR+
Sbjct: 126 GPCKKCLQDAEINKGEIGDVLLVGGMTRM 154
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 85.0 bits (201), Expect = 6e-17
Identities = 39/64 (60%), Positives = 53/64 (82%)
Frame = +1
Query: 40 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 219
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 220 TISG 231
TI+G
Sbjct: 62 TIAG 65
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/22 (77%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
Frame = +3
Query: 255 EPTAAAIAYGLDKK--GTGERN 314
EPTAAAIAYGLDK G ERN
Sbjct: 98 EPTAAAIAYGLDKARGGKAERN 119
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/83 (45%), Positives = 57/83 (68%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 434
EPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+ G+F + AG+ LGG+DF+
Sbjct: 205 EPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFN 263
Query: 435 NRMVNHFVQEFKRKYKKDLATNK 503
R + + +Q +++ + L ++
Sbjct: 264 ARFMQYLLQLIHKRFNRQLTCSE 286
Score = 66.9 bits (156), Expect = 2e-11
Identities = 33/91 (36%), Positives = 58/91 (63%), Gaps = 5/91 (5%)
Frame = +2
Query: 503 ESLRRLRTACERAKRTLSSSTQASIEI--DSLFEG---IDFYTSITRARFEELNADLFRS 667
E ++RLR E AK L+ + + +I++ SL EG + F +I+R FE +N DLF+
Sbjct: 286 EDIQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKK 345
Query: 668 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 760
++P+ + L + ++ K ++ ++VLVGGSTR+
Sbjct: 346 VLQPIRRVLAEVELPKEEVDEVVLVGGSTRV 376
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 WPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 177
+ F V +D G V KG PEE+ V+ K++ AE L TV AV++VPA
Sbjct: 119 YQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPA 178
Query: 178 YFNDSQRQATKDAGTISG 231
F+ QR AT A +++G
Sbjct: 179 EFDIKQRNATVKAASLAG 196
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 66.9 bits (156), Expect = 2e-11
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 EPTAAAIAYGLDKKGTGE---RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGE 425
+ TA ++AYG+ K+ RNV+ D+G + V I G +V STA + +LGG
Sbjct: 232 DTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGR 291
Query: 426 DFDNRMVNHFVQEFKRKYKKDLATNKRA 509
DFD +V HF QEFK KYK D+ ++ +A
Sbjct: 292 DFDYVLVEHFAQEFKTKYKIDVHSSIKA 319
Score = 59.7 bits (138), Expect = 3e-09
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 4 PFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 180
P++VV I+V Y G+ + F PE+V +M+ T++K TAE L V + VI+VP+Y
Sbjct: 147 PYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSY 206
Query: 181 FNDSQRQATKDAGTISG 231
+ D QR+ DA +G
Sbjct: 207 YTDRQRRCMLDASATAG 223
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 515 RLRTACERAKRTLSSST-QASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKS 691
+L CE+ K+ +S++T + I I+ E D + + RA+FEEL ADL + P+ +
Sbjct: 322 KLGAECEKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSA 381
Query: 692 LRDAKMDKAQIHDIV 736
L A+ K + ++V
Sbjct: 382 L--AQSGKYSVKNVV 394
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = +2
Query: 536 RAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 715
R K+ LS++ + +I+ +F+G DF +TR EE+ DLF PV ++L+ A M
Sbjct: 253 RVKQVLSANNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTM 312
Query: 716 AQIHDIVLVGGSTRI 760
I +VLVGG R+
Sbjct: 313 NDIDSVVLVGGGIRV 327
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +1
Query: 34 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 213
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 214 AGTISG 231
A + G
Sbjct: 127 AAELVG 132
Score = 37.1 bits (82), Expect = 0.016
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Frame = +3
Query: 261 TAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL------TIEDGIFE------VK 392
TA A+ YGL ++ T E++ + +D+G + +I+ T + GI E +K
Sbjct: 143 TAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTKTKDRGISETAPQLVIK 202
Query: 393 STAGDTHLGGEDFDNRMVNHFVQEFKRKYK 482
D LGG D R+ +H VQ FK+ YK
Sbjct: 203 GIGFDRTLGGHAIDMRLRDHLVQLFKKNYK 232
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Frame = +3
Query: 306 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---- 473
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLL 212
Query: 474 -KYKKDLATNKRA 509
K+K D TNKR+
Sbjct: 213 WKWKIDPLTNKRS 225
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 488 PRYQQESLRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 628
P + S +L+T+ E+ K LS+ A+ +DSL EGIDF ++R
Sbjct: 219 PLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 51.6 bits (118), Expect = 7e-07
Identities = 22/47 (46%), Positives = 36/47 (76%)
Frame = +2
Query: 620 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 760
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRM 99
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 222 HLWLERSPNHQEPTAAAIAYGLDK--KGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKS 395
H L + + T A A GL +G E + D G GT VS + +E+G +++
Sbjct: 1489 HAQLNKPADFTVETKGAGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHI 1548
Query: 396 TAGDTHLGGEDF 431
D H+ G F
Sbjct: 1549 KFADEHIPGSPF 1560
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 312 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 431
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
Length = 1318
Score = 31.5 bits (68), Expect = 0.77
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = -3
Query: 496 VARSFLYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIS 317
V R+ + N+ +L +L P KW P D +S P V + + PP S
Sbjct: 336 VGRALGFERFNALGYYLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPRDGS 394
Query: 316 TFRSPVPFLSRP 281
+ PF+S+P
Sbjct: 395 AKPATQPFVSQP 406
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 315 VLIFDLGGGTFDVSILTIEDGIFEVK 392
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_24060| Best HMM Match : GED (HMM E-Value=0.52)
Length = 297
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -1
Query: 267 QQSVLDDSENVQARDGTCIFCGLSLRVIEVRGNRDNCILHSFAKISFGSFLHFRKHHGTD 88
QQ + + EN+++ T IFCG + I +RG RD+ ++ +F + L FR G
Sbjct: 65 QQQIARNRENLRSLFKTIIFCGKN--NIPLRGLRDSDPTNAALAGNFQALLEFRVDSGDQ 122
Query: 87 FL 82
L
Sbjct: 123 IL 124
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 321 IFDLGGGTFDVSILTIEDGIFEV 389
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = -3
Query: 496 VARSFLYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKIS 317
V R+ + N+ + +L P KW D T I +V PPPR +
Sbjct: 543 VGRALGFERFNALGFYFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTA 602
Query: 316 TFRSPVPFLSRP 281
+ +PF+S+P
Sbjct: 603 KL-ATLPFVSQP 613
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 325 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 468
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 412 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 296
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 465 FKRKYKKDLATNKRALGVCVLHV-RGQRGPCHRPHKRALR*ILSLRVLTSTRQLL 626
FKR +++L + + LG CV+ V R + P H+RA R L TST ++
Sbjct: 47 FKRSIRRNLTYHCKELGKCVVDVARRNQCPASVQHERAPRSAQILPRATSTTTIV 101
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 328 TSAAVPSTCPSLPSRMVSSR*NPPPATP 411
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 394 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPT 501
PPPA T E L T +W+ T S + R KRT LPT
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPT 471
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 581 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 700
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -2
Query: 323 DKYISFSSTLFVKTVSNRSSSRFLMI 246
+K ISF +LF+ VSN S+ R++ I
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICI 777
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,835,294
Number of Sequences: 59808
Number of extensions: 568947
Number of successful extensions: 4362
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4353
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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