Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30574
         (755 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1BD70 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q689C5 Cluster: PFC0325c protein; n=4; cellular organis...    35   2.5  
UniRef50_A1ZPP3 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q6F0M8 Cluster: Tyrosyl-tRNA synthetase; n=4; Mollicute...    33   5.8  
UniRef50_O53026 Cluster: AS-48C1 protein; n=2; Enterococcus faec...    33   7.6  
UniRef50_Q235A6 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  

>UniRef50_A1BD70 Cluster: Putative uncharacterized protein; n=1;
           Chlorobium phaeobacteroides DSM 266|Rep: Putative
           uncharacterized protein - Chlorobium phaeobacteroides
           (strain DSM 266)
          Length = 329

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
 Frame = -1

Query: 731 KKYTMPRQTGVVFKRKGRKIVYDVYCF--IINQGKNDIMEKVKQTSEATKTSVSTVRCII 558
           +K TMP     +FK  G KIVY + C   ++N    D+       SE T  ++ TV   I
Sbjct: 115 EKNTMPGTR--LFKGVGLKIVYLLLCRPDLVNSSYRDL-------SEMTGVALGTVNTTI 165

Query: 557 NEAKSSGLLIVLGTPGRKDQGRRKLPE-WIVSF 462
            E      ++ +G  G+K   R+KL E W+ ++
Sbjct: 166 TELLMKDFILDMGKRGKKILNRKKLFERWVEAY 198


>UniRef50_Q689C5 Cluster: PFC0325c protein; n=4; cellular
           organisms|Rep: PFC0325c protein - Plasmodium falciparum
          Length = 528

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -1

Query: 347 KFTTNYERARLQMEKKTENNRKLVIEKSNIRYYESNIFKK*LIIDKKEDRTDRVVNYTDE 168
           ++   Y R   + +KK E N      K N++Y E N+F +    D KE+     V+Y D+
Sbjct: 348 RYNDYYNRVSNRNDKKNELNENSYYYK-NVKYNEKNMFME--NNDDKENEPYAEVHYNDD 404

Query: 167 PYVD 156
            Y+D
Sbjct: 405 KYID 408


>UniRef50_A1ZPP3 Cluster: Putative uncharacterized protein; n=1;
           Microscilla marina ATCC 23134|Rep: Putative
           uncharacterized protein - Microscilla marina ATCC 23134
          Length = 70

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 588 FCCFRSLFYFFHNIILPLVYNEAIYVVHNFSTLSFEYYTSLSRHSVF 728
           FCCF    Y F   +  L++NE++ V H+F T     YT    H+ F
Sbjct: 25  FCCFLLKQYPFQTNVQVLIHNESL-VKHSFFTYLNTCYTDCKLHNTF 70


>UniRef50_Q6F0M8 Cluster: Tyrosyl-tRNA synthetase; n=4;
           Mollicutes|Rep: Tyrosyl-tRNA synthetase - Mesoplasma
           florum (Acholeplasma florum)
          Length = 413

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = -1

Query: 710 QTGVVFKRKGRKIVYDVYCFIINQGKNDIMEKVKQTSEATKTSVSTVRCIINEA 549
           ++G V+    +  VYD Y F INQ  ND ++ +K  +  TK  +  +     EA
Sbjct: 230 ESGAVWLDSNKTSVYDFYQFWINQDDNDCVKMLKYLTFLTKEEIDELEAKHKEA 283


>UniRef50_O53026 Cluster: AS-48C1 protein; n=2; Enterococcus
           faecalis|Rep: AS-48C1 protein - Enterococcus faecalis
           (Streptococcus faecalis)
          Length = 164

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +3

Query: 192 VGSIFFFVYN*LFFEDIRFVVSNVTFFNYQLPIIFCFFFHLKPSSFII 335
           + S+FF   N L  E+  FV  N++FF  +L II   FF   P+ F++
Sbjct: 12  ITSLFFLFSNILIAEEFIFVEKNLSFFP-KLGIIVLVFFMSAPAFFVV 58


>UniRef50_Q235A6 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2593

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
 Frame = +1

Query: 436  MITSFYYRLNETIHSGNFLLP*SFLPGV-PSTMSK--PELLASLIMHLTV 576
            M+TSF  +++++ H  +FL   SF+P V  +T+SK  P+ LA L  H +V
Sbjct: 1289 MMTSFSQQMHDSSHKSSFLNNESFVPTVNKTTLSKNDPQQLAQLSQHNSV 1338


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,028,525
Number of Sequences: 1657284
Number of extensions: 12266972
Number of successful extensions: 33915
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33895
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)