Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30574
(755 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.5
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.5
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 4.6
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 22 4.6
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 22 4.6
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 22 4.6
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 6.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 6.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 6.1
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 6.1
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 6.1
AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory recept... 21 8.0
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 8.0
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.5
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 632 NDIMEKVKQTSEATKTSVSTVRCIINEAKSSGLL-IVLGTPGRKDQGRRKLPEW 474
N + EK+ TS+A + CI+ SS +L +V+ + ++P+W
Sbjct: 258 NLVAEKIPTTSDAVPLIGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPQW 311
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 600 RSLFYFFHNIILPLV 644
R+L+YFF N+I+P V
Sbjct: 210 RTLYYFF-NLIVPCV 223
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.5
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 632 NDIMEKVKQTSEATKTSVSTVRCIINEAKSSGLL-IVLGTPGRKDQGRRKLPEW 474
N + EK+ TS+A + CI+ SS +L +V+ + ++P+W
Sbjct: 258 NLVAEKIPTTSDAVPLIGTYFNCIMFMVASSVVLTVVVLNYHHRTADIHEMPQW 311
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 600 RSLFYFFHNIILPLV 644
R+L+YFF N+I+P V
Sbjct: 210 RTLYYFF-NLIVPCV 223
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 489 SSSLIFSTRSPKHDEQARAFSFVNNAPNS 575
SS ++ + ++D Q + FVNN P S
Sbjct: 395 SSEVMMFRMARRYDVQTDSILFVNNQPYS 423
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +3
Query: 240 IRFVVSNVTFFNYQLPIIFCFFFHLKPSSFII 335
+RF ++ ++ F Y I++C + SF+I
Sbjct: 317 LRFCLNILSIFTYVPMILYCVYTTATYDSFMI 348
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 412 FAACYVVIMITSFYYRLN 465
F +VVI+IT F++ N
Sbjct: 531 FGVSFVVIVITIFFFTAN 548
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 385 FRSLSTVRSFAACYVVIMITSFYYRLNETIHS 480
F ++ +R+ + + +IT FY TIHS
Sbjct: 402 FSDITFMRTVWKFFNIFLITPFYNFNENTIHS 433
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +3
Query: 240 IRFVVSNVTFFNYQLPIIFCFFFHLKPSSFII 335
+RF ++ ++ F Y I++C + SF+I
Sbjct: 42 LRFCLNILSIFTYVPMILYCVYTTATYDSFMI 73
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 412 FAACYVVIMITSFYYRLN 465
F +VVI+IT F++ N
Sbjct: 256 FGVSFVVIVITIFFFTAN 273
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 600 RSLFYFFHNIILPLV 644
R+L+YFF N+I+P V
Sbjct: 210 RTLYYFF-NLIVPCV 223
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 600 RSLFYFFHNIILPLV 644
R+L+YFF N+I+P V
Sbjct: 210 RTLYYFF-NLIVPCV 223
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 600 RSLFYFFHNIILPLV 644
R+L+YFF N+I+P V
Sbjct: 210 RTLYYFF-NLIVPCV 223
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 303 FFHLKPSSFIIRRKLHSEPLKCISSLKFSKPFYGT 407
FF + FII LH + C LK+ +Y T
Sbjct: 980 FFFCMAAEFIIAALLHPQEFNC---LKYGVIYYVT 1011
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 6.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 303 FFHLKPSSFIIRRKLHSEPLKCISSLKFSKPFYGT 407
FF + FII LH + C LK+ +Y T
Sbjct: 980 FFFCMAAEFIIAALLHPQEFNC---LKYGVIYYVT 1011
>AM292343-1|CAL23155.2| 301|Tribolium castaneum gustatory receptor
candidate 22 protein.
Length = 301
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 588 FCCFRSLFYFFHNIILPLVYNEAIYVVHNF 677
+ F +FY H I+L + N YV F
Sbjct: 178 YIIFFDMFYQHHKIVLDMGKNCVTYVFDLF 207
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 77 TNTSFASTERRPGNSSSFDLI 15
TNTS +ST NSS +++
Sbjct: 429 TNTSTSSTNSNKPNSSDLNML 449
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,875
Number of Sequences: 336
Number of extensions: 3536
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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