Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30572
(706 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M21904-1|AAA35489.1| 529|Homo sapiens protein ( Human 4F2 glyco... 80 9e-15
J02939-1|AAA52497.1| 529|Homo sapiens MDU1 protein. 80 9e-15
J02769-1|AAA51540.1| 529|Homo sapiens H4F2 protein. 80 9e-15
BC003000-1|AAH03000.2| 568|Homo sapiens solute carrier family 3... 80 9e-15
BC001061-1|AAH01061.2| 630|Homo sapiens solute carrier family 3... 80 9e-15
AB018010-1|BAA84649.1| 529|Homo sapiens 4F2 heavy chain protein. 80 9e-15
J03569-1|AAA35536.1| 529|Homo sapiens protein ( Human lymphocyt... 78 4e-14
BC117182-1|AAI17183.1| 1654|Homo sapiens CEP152 protein protein. 30 9.3
BC107721-1|AAI07722.1| 592|Homo sapiens CEP152 protein protein. 30 9.3
BC069186-1|AAH69186.1| 591|Homo sapiens CEP152 protein protein. 30 9.3
AK222963-1|BAD96683.1| 469|Homo sapiens cytosolic beta-glucosid... 30 9.3
AK027618-1|BAB55237.1| 849|Homo sapiens protein ( Homo sapiens ... 30 9.3
AB020719-1|BAA74935.1| 1300|Homo sapiens KIAA0912 protein protein. 30 9.3
>M21904-1|AAA35489.1| 529|Homo sapiens protein ( Human 4F2
glycosylated heavy chain (4F2HC) antigen gene, exon 9.
).
Length = 529
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Frame = +1
Query: 286 AKYVVGDHRNGDAKIELDANKRQ------FTGMTREEVLKYADDPFWVNLRWSLFVLFWV 447
A + G +NG KI++ ++ + FTG+++EE+LK A P WV RW+L +LFW+
Sbjct: 31 AMSLAGAEKNGLVKIKVAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL 90
Query: 448 AWLCMLAGAIAVIVRAPKC 504
WL MLAGA+ +IVRAP+C
Sbjct: 91 GWLGMLAGAVVIIVRAPRC 109
>J02939-1|AAA52497.1| 529|Homo sapiens MDU1 protein.
Length = 529
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Frame = +1
Query: 286 AKYVVGDHRNGDAKIELDANKRQ------FTGMTREEVLKYADDPFWVNLRWSLFVLFWV 447
A + G +NG KI++ ++ + FTG+++EE+LK A P WV RW+L +LFW+
Sbjct: 31 AMSLAGAEKNGLVKIKVAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL 90
Query: 448 AWLCMLAGAIAVIVRAPKC 504
WL MLAGA+ +IVRAP+C
Sbjct: 91 GWLGMLAGAVVIIVRAPRC 109
>J02769-1|AAA51540.1| 529|Homo sapiens H4F2 protein.
Length = 529
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Frame = +1
Query: 286 AKYVVGDHRNGDAKIELDANKRQ------FTGMTREEVLKYADDPFWVNLRWSLFVLFWV 447
A + G +NG KI++ ++ + FTG+++EE+LK A P WV RW+L +LFW+
Sbjct: 31 AMSLAGAEKNGLVKIKVAEDEAEAAAPAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL 90
Query: 448 AWLCMLAGAIAVIVRAPKC 504
WL MLAGA+ +IVRAP+C
Sbjct: 91 GWLGMLAGAVVIIVRAPRC 109
>BC003000-1|AAH03000.2| 568|Homo sapiens solute carrier family 3
(activators of dibasic and neutral amino acid transport
protein.
Length = 568
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Frame = +1
Query: 286 AKYVVGDHRNGDAKIELDANKRQ------FTGMTREEVLKYADDPFWVNLRWSLFVLFWV 447
A + G +NG KI++ ++ + FTG+++EE+LK A P WV RW+L +LFW+
Sbjct: 70 AMSLAGAEKNGLVKIKVAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL 129
Query: 448 AWLCMLAGAIAVIVRAPKC 504
WL MLAGA+ +IVRAP+C
Sbjct: 130 GWLGMLAGAVVIIVRAPRC 148
>BC001061-1|AAH01061.2| 630|Homo sapiens solute carrier family 3
(activators of dibasic and neutral amino acid transport
protein.
Length = 630
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Frame = +1
Query: 286 AKYVVGDHRNGDAKIELDANKRQ------FTGMTREEVLKYADDPFWVNLRWSLFVLFWV 447
A + G +NG KI++ ++ + FTG+++EE+LK A P WV RW+L +LFW+
Sbjct: 132 AMSLAGAEKNGLVKIKVAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL 191
Query: 448 AWLCMLAGAIAVIVRAPKC 504
WL MLAGA+ +IVRAP+C
Sbjct: 192 GWLGMLAGAVVIIVRAPRC 210
>AB018010-1|BAA84649.1| 529|Homo sapiens 4F2 heavy chain protein.
Length = 529
Score = 79.8 bits (188), Expect = 9e-15
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Frame = +1
Query: 286 AKYVVGDHRNGDAKIELDANKRQ------FTGMTREEVLKYADDPFWVNLRWSLFVLFWV 447
A + G +NG KI++ ++ + FTG+++EE+LK A P WV RW+L +LFW+
Sbjct: 31 AMSLAGAEKNGLVKIKVAEDEAEAAAAAKFTGLSKEELLKVAGSPGWVRTRWALLLLFWL 90
Query: 448 AWLCMLAGAIAVIVRAPKC 504
WL MLAGA+ +IVRAP+C
Sbjct: 91 GWLGMLAGAVVIIVRAPRC 109
>J03569-1|AAA35536.1| 529|Homo sapiens protein ( Human lymphocyte
activation antigen 4F2 large subunit mRNA, complete cds.
).
Length = 529
Score = 77.8 bits (183), Expect = 4e-14
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +1
Query: 352 QFTGMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKC 504
+FTG+++EE+LK A P WV RW+L +LFW+ WL MLAGA+ +IVRAP+C
Sbjct: 59 KFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRC 109
>BC117182-1|AAI17183.1| 1654|Homo sapiens CEP152 protein protein.
Length = 1654
Score = 29.9 bits (64), Expect = 9.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 489 YNDCNSPGEHAQPGHPEQHE 430
Y+DC+ G QP HPEQ E
Sbjct: 53 YSDCSEDGTDGQPHHPEQLE 72
>BC107721-1|AAI07722.1| 592|Homo sapiens CEP152 protein protein.
Length = 592
Score = 29.9 bits (64), Expect = 9.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 489 YNDCNSPGEHAQPGHPEQHE 430
Y+DC+ G QP HPEQ E
Sbjct: 53 YSDCSEDGTDGQPHHPEQLE 72
>BC069186-1|AAH69186.1| 591|Homo sapiens CEP152 protein protein.
Length = 591
Score = 29.9 bits (64), Expect = 9.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 489 YNDCNSPGEHAQPGHPEQHE 430
Y+DC+ G QP HPEQ E
Sbjct: 53 YSDCSEDGTDGQPHHPEQLE 72
>AK222963-1|BAD96683.1| 469|Homo sapiens cytosolic beta-glucosidase
variant protein.
Length = 469
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 328 IELDANKRQFTGMTREEVLKYADDPFWVNLRWSLFVLFW 444
I+ NKR G+ ++ +++ DP W N+ W ++V+ W
Sbjct: 314 IKYQENKRGELGILQDAEIEFFPDPSWKNVDW-IYVVPW 351
>AK027618-1|BAB55237.1| 849|Homo sapiens protein ( Homo sapiens
cDNA FLJ14712 fis, clone NT2RP3000825, weakly similar to
NEUROGENIC LOCUS NOTCH 3 PROTEIN. ).
Length = 849
Score = 29.9 bits (64), Expect = 9.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2
Query: 395 TILSG*TCVG--RCSCCSGWPGCACS 466
T ++G CVG CSC SGW G C+
Sbjct: 752 TCMNGGKCVGPSTCSCPSGWSGKRCN 777
>AB020719-1|BAA74935.1| 1300|Homo sapiens KIAA0912 protein protein.
Length = 1300
Score = 29.9 bits (64), Expect = 9.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 489 YNDCNSPGEHAQPGHPEQHE 430
Y+DC+ G QP HPEQ E
Sbjct: 78 YSDCSEDGTDGQPHHPEQLE 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,617,989
Number of Sequences: 237096
Number of extensions: 2085104
Number of successful extensions: 7076
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7056
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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