Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30566
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = -2

Query: 491 LSHQVIL----VYLRDLDHLFALVHQTQWPPSLLDLLFP 387
           ++H+V+     +Y+ +++H F++    Q    L D+LFP
Sbjct: 329 INHRVVFTAMGLYVLNMEHFFSVKCSIQSESLLNDILFP 367


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 325 FGRATRSCRSNWTTWN 372
           FG  T SC   WT WN
Sbjct: 106 FGHET-SCTRYWTCWN 120


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 468  IPEGP*SPFCPGAPNPVAPFSPR 400
            IP+ P    C   P PV P  P+
Sbjct: 994  IPDNPSREDCTKPPEPVTPAPPQ 1016


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 160 KAYQELMENMGGQDYLVLQDKK 225
           K    ++EN+  +  +V++DKK
Sbjct: 202 KTINNILENLWAKKLIVVKDKK 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,293
Number of Sequences: 336
Number of extensions: 3138
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)