Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30566
(642 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0397 - 24921892-24922947,24923486-24923734,24923807-249241... 37 0.012
06_01_0145 + 1092764-1093351 36 0.021
03_06_0187 + 32209924-32210634 33 0.25
02_04_0407 + 22645775-22645865,22645998-22646269 32 0.34
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 31 0.59
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 31 0.59
07_01_0479 + 3606663-3607448 31 0.78
08_02_0588 + 19036509-19039235 31 1.0
03_06_0188 + 32212297-32212746 31 1.0
10_08_0703 - 20014414-20014920 30 1.8
07_01_0930 + 7822669-7823265,7823368-7823466,7823563-7823783,782... 30 1.8
01_01_1143 - 9064210-9065682 30 1.8
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 29 3.1
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 29 3.1
07_01_0756 + 5819367-5820038,5820847-5821005 29 4.1
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 29 4.1
02_02_0015 + 6109552-6109650,6110006-6110078,6111937-6111998,611... 29 4.1
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 28 5.5
02_05_0389 + 28551649-28551903,28552328-28552402,28552482-285526... 28 5.5
12_02_0590 - 20853040-20853081,20853694-20853918,20854995-208558... 28 7.2
10_08_0399 - 17614585-17614809,17614860-17615168 28 7.2
10_06_0030 - 9834515-9834608,9834784-9835277 28 7.2
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 28 7.2
04_04_1666 + 35202970-35203163,35203615-35203677,35204834-35205815 28 7.2
03_05_0783 - 27662178-27662237,27662659-27662700,27662791-276628... 28 7.2
03_05_0663 + 26546810-26547304 28 7.2
02_05_0149 + 26290236-26290880 28 7.2
07_03_1160 - 24430240-24431268 27 9.6
07_03_0350 + 17077481-17078225,17078585-17078647,17078773-17078786 27 9.6
06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867 27 9.6
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 27 9.6
>04_04_0397 -
24921892-24922947,24923486-24923734,24923807-24924157,
24924244-24924331,24924466-24924563,24925141-24925362,
24925490-24925585,24926410-24926481,24927156-24927305
Length = 793
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 168 PGTHGKHGRPGLPGAPGQKGDQGLPGLPG 254
PGT G PG+PG PG G + +PG+PG
Sbjct: 490 PGTGGM--MPGMPGTPGMPGSRKMPGMPG 516
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 162 GLPGTHGKHGRPGLPGAPGQKGD 230
G+PGT G G +PG PG D
Sbjct: 498 GMPGTPGMPGSRKMPGMPGLDND 520
>06_01_0145 + 1092764-1093351
Length = 195
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = +1
Query: 511 LDGLPGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGNKG 627
+D PG G G PGQ G RG GR G G G G G
Sbjct: 11 VDDQPGEPGQPGEPGQPGGRGRGGRGGRGGRGGAGGRLG 49
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 550 PGQKGDRGYPGRPGLQGEQGMKGNKGQ 630
PG+ G G PG+PG +G G G G+
Sbjct: 15 PGEPGQPGEPGQPGGRGRGGRGGRGGR 41
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 544 GPPGQKGDRGYPGRPGLQGEQGMKGNKGQA 633
G PGQ G+ G PG G +G +G +G +G A
Sbjct: 16 GEPGQPGEPGQPGGRG-RGGRGGRGGRGGA 44
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +2
Query: 263 RPGIPGLPGEKGQKGDQGNEXXXXXXXXXXXXXXXXXXXXXXEKGDRGEKGATGFGAPG 439
+PG PG PGE GQ G +G +G RG GA G G G
Sbjct: 14 QPGEPGQPGEPGQPGGRGR--GGRGGRGGRGGAGGRLGVRHGRRGRRGGGGARGQGCVG 70
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 189 GRPGLPGAPGQKGDQGLPGLPG 254
G PG PG PGQ G +G G G
Sbjct: 16 GEPGQPGEPGQPGGRGRGGRGG 37
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 153 GEKGLPGTHGKHGRPGLPGAPGQKGDQGLPGLPG 254
GE + G+ G+PG PG PG +G G G G
Sbjct: 7 GEFPVDDQPGEPGQPGEPGQPGGRGRGGRGGRGG 40
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 168 PGTHGKHGRPGLPGAPGQKGDQGLPGLPG 254
PG G+ G PG PG G+ G G G G
Sbjct: 15 PGEPGQPGEPGQPGGRGRGGRGGRGGRGG 43
>03_06_0187 + 32209924-32210634
Length = 236
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 208 PGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSP 101
PG P +P P VP P +P V P P P+ PV+P
Sbjct: 143 PGVPTIPTVPGVPELPVNPGGVVPTIPKVPLPPVNP 178
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = -3
Query: 208 PGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPIRP 83
P PG+P P VPG P P V PG V P P P P+ P
Sbjct: 140 PTIPGVPTIPTVPGVPELP--VNPGGVV-PTIPKVPLPPVNP 178
>02_04_0407 + 22645775-22645865,22645998-22646269
Length = 120
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 150 KGEKGLPGTHGKHGRPGLP-GAPGQKGDQGLPGLPGNWVG 266
+G G P G +G PG G PG+ G G PG G W G
Sbjct: 47 RGGGGYPPRGGGYGYPGRGYGYPGRGGGGGYPGGGGGWHG 86
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 517 GLPGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKG 618
G GR GP+G GQ+ G+ GR G +G +G
Sbjct: 1065 GFGGREGPVGFGGQESPGGFGGRKGPGAFEGREG 1098
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 31.5 bits (68), Expect = 0.59
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 422 GFGAPGQKGDQGPSGIPG--LPGEKGDKGDRD*MDYLVEPDRLVRQVRK 562
G G PG G QG G PG PG GDK DR + P R+ R+ RK
Sbjct: 2 GQGTPGGMGKQG--GAPGDRKPGGDGDKKDRK-FEPPAAPSRVGRKQRK 47
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -3
Query: 208 PGNPGLPCFP*VPGKP-FSPFIVKPGRPVGPIGPVSPFSPIRPVKP 74
PG P P P + G P P V+PG P GP + P P P +P
Sbjct: 198 PGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRP 243
>08_02_0588 + 19036509-19039235
Length = 908
Score = 30.7 bits (66), Expect = 1.0
Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 7/101 (6%)
Frame = +1
Query: 358 WTTWNSWYYWGKRRS--RREGGHW-VWCTRAKR*SRSLRYTRITW*ER**RRS*LDGLPG 528
W W W++WG + RR W A R S R W R+ LP
Sbjct: 17 WAWWWWWWWWGDLQGGWRRGMDRWEALIAAAARRSEPPRSGWAEWGGGGDARAGAAALPS 76
Query: 529 R--TGPIGPPGQKGDRG--YPGRPGLQGEQGMKGNKGQAAE 639
R P+ G +G+ G GR G +G G G+ AE
Sbjct: 77 RCPRRPVAAAGGRGEGGDRMRGRGGEEGTWTAHGGGGRGAE 117
>03_06_0188 + 32212297-32212746
Length = 149
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 199 PGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSP-FSPIRPVKP 74
PG+P P VPG P +V PG P P+ P P PI P P
Sbjct: 59 PGIPVIPGVPGVP----VVGPGIPFVPVIPGVPVIVPIIPGVP 97
>10_08_0703 - 20014414-20014920
Length = 168
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +3
Query: 162 GLPGTHGKHGRPGLPGAPGQKGDQGLPGLPGNWVGLVYLGS 284
G P G R LPG G GD+ +PG GNW G VY S
Sbjct: 26 GAPREAGDERR--LPGTGGN-GDKAMPGGGGNW-GFVYARS 62
>07_01_0930 +
7822669-7823265,7823368-7823466,7823563-7823783,
7824319-7824388,7824493-7824572,7825373-7825437,
7826476-7826669
Length = 441
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Frame = +2
Query: 392 KGDRGE----KGATGFG-----APGQKGDQGPSGIPGLPGEKGDKGDRD*MDYLVEPDRL 544
KG+RGE G+ G G G GD G G G G+ GD+GD D ++ D++
Sbjct: 102 KGERGEVADVDGSGGNGKLPSSGGGGDGDNGGGGGGGDGGDGGDEGD-DEFGPILSFDQV 160
Query: 545 VRQVRK 562
V++V K
Sbjct: 161 VQEVEK 166
>01_01_1143 - 9064210-9065682
Length = 490
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 413 GATGFGAP--GQKGDQGPSGIPGLPGEKGDKG 502
GA G G P G G SG+PG+PG G G
Sbjct: 436 GANGSGLPNPGASAGLGSSGLPGMPGAGGYLG 467
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 171 GTHGKHGRPGLPGAPGQKGDQGLPGLPG 254
G +G G P PGA G GLPG+PG
Sbjct: 436 GANGS-GLPN-PGASAGLGSSGLPGMPG 461
>09_04_0695 -
19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 139 PGRPVGPIGPVSPFSPIRPVKP 74
P PV PIGPVSP P+ P+ P
Sbjct: 509 PLGPVAPIGPVSP-GPVAPLGP 529
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 465 PEGP*SPFCPGAPNPVAPFSP 403
P GP +P P +P PVAP P
Sbjct: 509 PLGPVAPIGPVSPGPVAPLGP 529
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 422 GFGAPGQKGDQGPSGIPG--LPGE--KGDKGDRD*MDYLVEPDRLVRQVRK 562
G G PG G QG G+PG PG+ GDK DR + P R+ R+ RK
Sbjct: 2 GQGTPGGMGKQG--GLPGDRKPGDGGAGDKKDRK-FEPPAAPSRVGRKQRK 49
>07_01_0756 + 5819367-5820038,5820847-5821005
Length = 276
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 389 EKGDRGEKGAT--GFGAPGQKGDQGPSGIPGLPGEKGDKGDRD*MDYLVEPDRLVRQ 553
E+G GE+G GFG +G +G G G G +G + + + + + RLV++
Sbjct: 3 ERGGGGERGGERGGFGRGFGRGGRGDRGRGGRGGRRGPRQEEEKWVPVTKLGRLVKE 59
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -3
Query: 211 APGNPGLPCFP*VPGKPFSPFIVKPGRPVG-PIGPVSPFSP-IRP 83
AP N L FP +P P + PG P+G P P +P P +RP
Sbjct: 68 APFNQHLLSFPGGVPRPRLPILPTPGMPLGVPQVPGAPLMPGVRP 112
>02_02_0015 +
6109552-6109650,6110006-6110078,6111937-6111998,
6112315-6112376,6112463-6112556,6112673-6113227,
6113379-6113870,6113967-6114137,6115713-6115817,
6115903-6116052,6116372-6116498,6116585-6116648,
6117147-6117203,6117423-6117555,6117660-6117746
Length = 776
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 169 GKPFSPFIVKPGRPVGPIGPVSPFSPIRPVKP 74
G+P P + + P PI P P P RP+ P
Sbjct: 262 GEPPKPNVARTIDPPRPIDPPRPIDPPRPIDP 293
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 517 GLPGRTGPIGPPGQKGDRGY-PGRPGLQGEQGMKGNKG 627
G+ GR G GPPG G RGY PG G G G +G
Sbjct: 39 GVGGRGGR-GPPGGGGGRGYEPGGGRGYGGGGGGGGRG 75
>02_05_0389 +
28551649-28551903,28552328-28552402,28552482-28552605,
28552692-28552978,28553147-28553482,28553813-28553869,
28554156-28554382,28554465-28554627,28554912-28554938
Length = 516
Score = 28.3 bits (60), Expect = 5.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 498 KEIVIRWITWSNRTDWSA 551
+E++ RW+ W N + WS+
Sbjct: 177 QEVIYRWVDWLNSSSWSS 194
>12_02_0590 -
20853040-20853081,20853694-20853918,20854995-20855886,
20856120-20856122,20856284-20856513
Length = 463
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 151 KEKKAYQELMENMGGQDYLVLQDKKAIKVYQDFREIGSAWY 273
K K+ +E++E+ DY V D K V +E+G ++Y
Sbjct: 62 KTKEERREMVESFVNTDYRVSNDGKFPSVNLTHKEVGGSYY 102
>10_08_0399 - 17614585-17614809,17614860-17615168
Length = 177
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 392 KGDRGEKGATGFGAPGQKGDQGPSGIPGLPGEKGDKGDR 508
KG RG G G G G G LPGE+G R
Sbjct: 74 KGKRGGGGGAGAREGGGGGGGGAVAAASLPGERGRSAAR 112
>10_06_0030 - 9834515-9834608,9834784-9835277
Length = 195
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 186 HGRPGLPGAPGQKGDQGLPGLPGNW 260
+G +P A G KGD LP L G W
Sbjct: 89 YGLEVVPSALGSKGDGKLPRLEGEW 113
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +3
Query: 18 QGLQGEKGDRGSLGEKGDQGFTGRMGEKGDXXXXXXXXXXXXXXKGEKGLPGTHGKHGRP 197
+G + GD G ++G +G GR G +GD GE+G +G+ G
Sbjct: 86 RGYYDDGGD-GRGYQRGMEGGGGRGGYRGDGDGGYGRGGGGYHGDGERG----YGRGGGG 140
Query: 198 GLPGAPGQKGD 230
G G G +GD
Sbjct: 141 GGGGGGGYRGD 151
>04_04_1666 + 35202970-35203163,35203615-35203677,35204834-35205815
Length = 412
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 460 GTLITFLPWCTKPSGPLLSSI 398
G ++ L WC K GPL +S+
Sbjct: 271 GVMLVVLSWCVKRRGPLFASV 291
>03_05_0783 -
27662178-27662237,27662659-27662700,27662791-27662892,
27662991-27663147,27663230-27663307,27663391-27663446,
27663557-27663634,27663736-27663867,27663943-27664078,
27664252-27664403,27665317-27665391,27665476-27665535,
27665865-27665944,27666392-27666462,27666549-27666689,
27667467-27667555,27668657-27668731,27669303-27669401,
27669526-27669572,27669654-27669875,27671485-27671557,
27671650-27671823
Length = 732
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 166 YQELMENMGGQDYLVLQDKKAIKVYQDFREIGSAWYTWAPR*KRTKG 306
Y +L + Y+V +D KVY FR++G PR R G
Sbjct: 643 YLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVG 689
>03_05_0663 + 26546810-26547304
Length = 164
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Frame = +3
Query: 168 PGTHGKHGRPGLPG---APGQKGDQG---LPGLPGNWVG 266
PG G G P +PG PG G G +PG+ G W G
Sbjct: 56 PGGGGGGGIPTIPGFGSIPGMGGGMGGFNVPGMGGGWGG 94
>02_05_0149 + 26290236-26290880
Length = 214
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 523 PGRTGPIGPPGQKGDRG 573
PG+TGP PPG KG G
Sbjct: 47 PGKTGPPLPPGWKGGSG 63
>07_03_1160 - 24430240-24431268
Length = 342
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 202 NPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPIRPVKP 74
NP P P P +P +KP +P P P P P +P +P
Sbjct: 219 NPNGPSIPNQPPQPIPNGPIKPDQPPQP-NPDMPPKPDQPPQP 260
>07_03_0350 + 17077481-17078225,17078585-17078647,17078773-17078786
Length = 273
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -3
Query: 208 PGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPIRPVKP 74
PG P LP P +PG P P + P P P P I P P
Sbjct: 95 PGLPTLPQLPTIPGLPQLPTLPTIQIPELPPLPPLPSVSITPGSP 139
>06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867
Length = 237
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 535 GPIGPPGQKGDRGYPGRPGLQGEQGMKGNKGQ 630
G PG++G R PG QG +G +G + Q
Sbjct: 2 GGAAAPGRRGRRRQPGCQIRQGREGRRGRRRQ 33
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 526 GRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGN 621
G GP G G GY G P +G GMK +
Sbjct: 447 GGYGPQGGSGFSESYGYSGSPSHRGNAGMKSS 478
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,977,950
Number of Sequences: 37544
Number of extensions: 351629
Number of successful extensions: 1448
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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