Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30566
(642 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g37410.2 68415.m04588 mitochondrial import inner membrane tra... 40 0.001
At2g37410.1 68415.m04587 mitochondrial import inner membrane tra... 40 0.001
At1g64450.1 68414.m07306 proline-rich family protein contains pr... 40 0.001
At3g24780.1 68416.m03110 hypothetical protein 36 0.023
At3g02670.1 68416.m00258 proline-rich family protein contains pr... 35 0.040
At4g28520.3 68417.m04081 12S seed storage protein, putative / cr... 33 0.12
At4g28520.2 68417.m04079 12S seed storage protein, putative / cr... 33 0.12
At4g28520.1 68417.m04080 12S seed storage protein, putative / cr... 33 0.12
At1g44222.1 68414.m05107 hypothetical protein 33 0.21
At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C) 32 0.28
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 31 0.65
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 31 0.86
At5g57870.2 68418.m07239 eukaryotic translation initiation facto... 30 1.5
At5g57870.1 68418.m07238 eukaryotic translation initiation facto... 30 1.5
At1g15830.1 68414.m01900 expressed protein 29 2.6
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 29 3.5
At4g32375.1 68417.m04610 glycoside hydrolase family 28 protein /... 28 4.6
At4g25630.1 68417.m03691 fibrillarin 2 (FIB2) identical to fibri... 28 4.6
At5g15410.2 68418.m01803 cyclic nucleotide-regulated ion channel... 28 6.1
At5g15410.1 68418.m01804 cyclic nucleotide-regulated ion channel... 28 6.1
At5g07510.1 68418.m00860 glycine-rich protein (GRP14) oleosin; g... 28 6.1
At3g50570.1 68416.m05531 hydroxyproline-rich glycoprotein family... 28 6.1
At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein... 27 8.0
At1g31540.1 68414.m03869 disease resistance protein (TIR-NBS-LRR... 27 8.0
>At2g37410.2 68415.m04588 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 168 PGTHGKHGRPGLPGAPGQKGDQGLPGLPGNWVGLVYLGSQVKKDKR 305
PG G G G+ G PG G QG+PG+ G +G + +Q++ + +
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQMGQMQSQAQIRSESQ 193
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 535 GPIGPPGQKGDRGYPGRPGLQGEQGMKG 618
G G PG +G +G PG PG+QG GM+G
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 511 LDGLPGRTGPIGPPGQKGDRGYPGRPGLQ 597
+ G+PG G G PG G +G PG G+Q
Sbjct: 150 MQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 178
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 523 PGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGNKGQA 633
PG G G G +G G PG G+ G QGM+ + Q+
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQMGQMQS 184
Score = 30.7 bits (66), Expect = 0.86
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 3 GLPGLQGLQGEKGDRGSLGEKGDQGFTGRMGE 98
G+PG+QG+QG G G G G QG +MG+
Sbjct: 152 GMPGMQGMQGMPGMPGMQGMPGMQGM--QMGQ 181
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 9 PGLQGLQGEKGDRGSLGEKGDQGFTGRMG 95
PG+QG+ G +G +G G G QG G G
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 428 GAPGQKGDQGPSGIPGLPGEKGDKG 502
G PG +G QG G+PG+ G G +G
Sbjct: 152 GMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 428 GAPGQKGDQGPSGIPGLPGEKGDKG 502
G G G QG G+PG+PG +G G
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPG 173
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 565 DRGYPGRPGLQGEQGMKGNKG 627
D G G PG+QG QGM G G
Sbjct: 147 DPGMQGMPGMQGMQGMPGMPG 167
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 251 GKLGRPGIPGLPGEKGQKGDQG 316
G G G+PG+PG +G G QG
Sbjct: 155 GMQGMQGMPGMPGMQGMPGMQG 176
>At2g37410.1 68415.m04587 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 168 PGTHGKHGRPGLPGAPGQKGDQGLPGLPGNWVGLVYLGSQVKKDKR 305
PG G G G+ G PG G QG+PG+ G +G + +Q++ + +
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQMGQMQSQAQIRSESQ 193
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 535 GPIGPPGQKGDRGYPGRPGLQGEQGMKG 618
G G PG +G +G PG PG+QG GM+G
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 511 LDGLPGRTGPIGPPGQKGDRGYPGRPGLQ 597
+ G+PG G G PG G +G PG G+Q
Sbjct: 150 MQGMPGMQGMQGMPGMPGMQGMPGMQGMQ 178
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 523 PGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGNKGQA 633
PG G G G +G G PG G+ G QGM+ + Q+
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQGMQMGQMQS 184
Score = 30.7 bits (66), Expect = 0.86
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 3 GLPGLQGLQGEKGDRGSLGEKGDQGFTGRMGE 98
G+PG+QG+QG G G G G QG +MG+
Sbjct: 152 GMPGMQGMQGMPGMPGMQGMPGMQGM--QMGQ 181
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 9 PGLQGLQGEKGDRGSLGEKGDQGFTGRMG 95
PG+QG+ G +G +G G G QG G G
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 428 GAPGQKGDQGPSGIPGLPGEKGDKG 502
G PG +G QG G+PG+ G G +G
Sbjct: 152 GMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 428 GAPGQKGDQGPSGIPGLPGEKGDKG 502
G G G QG G+PG+PG +G G
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPG 173
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 565 DRGYPGRPGLQGEQGMKGNKG 627
D G G PG+QG QGM G G
Sbjct: 147 DPGMQGMPGMQGMQGMPGMPG 167
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 251 GKLGRPGIPGLPGEKGQKGDQG 316
G G G+PG+PG +G G QG
Sbjct: 155 GMQGMQGMPGMPGMQGMPGMQG 176
>At1g64450.1 68414.m07306 proline-rich family protein contains
proline rich extensins, INTERPRO:IPR0002965
Length = 342
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/41 (51%), Positives = 22/41 (53%)
Frame = -3
Query: 205 GNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPIRP 83
GNPG P FP PG P F PG P+ P P SP PI P
Sbjct: 188 GNPGPPSFPRNPGSP--EFPGNPGAPIIPRNPGSPEFPINP 226
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/45 (44%), Positives = 23/45 (51%)
Frame = -3
Query: 208 PGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSPFSPIRPVKP 74
PGNPG P P PG P P I P P P+ P +P P+ P P
Sbjct: 205 PGNPGAPIIPRNPGSPEFP-INPPRNPGAPVIPRNPNPPVFPGNP 248
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -3
Query: 208 PGNPGLPCFP*VPGKPFSP----FIVKPGRPVGPIGPVSPFSPIRPVKP 74
PGNPG P F PG P P PG P PI P +P SP P+ P
Sbjct: 178 PGNPGSPDFSGNPGPPSFPRNPGSPEFPGNPGAPIIPRNPGSPEFPINP 226
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 208 PGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPV-SPFSPIRPVKP 74
P NPG P FP PG P P PG P PI P +P +P+ P P
Sbjct: 196 PRNPGSPEFPGNPGAPIIP--RNPGSPEFPINPPRNPGAPVIPRNP 239
Score = 35.1 bits (77), Expect = 0.040
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 211 APGNPGLPCFP*VPGKPFSP-FIVKPGRPVGPIGPVSPFSPIRPVKP 74
+P PG P P +PG P SP F PG P P P SP P P P
Sbjct: 165 SPYFPGYPESPDLPGNPGSPDFSGNPGPPSFPRNPGSPEFPGNPGAP 211
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 162 GLPGTHGKHGRPGLPGAPGQKGDQGLPGLPG 254
G PG+ G PG P P G PG PG
Sbjct: 179 GNPGSPDFSGNPGPPSFPRNPGSPEFPGNPG 209
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 523 PGRTGPIGPPGQKGDRGYPGRPG 591
PG +GPPG G G PG PG
Sbjct: 245 PGNPRSMGPPGFPGIGGPPGFPG 267
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 165 LPGTHGKHGRPGLPGAPGQKGDQGLPGLPGN 257
LPG G G PG P + G P PGN
Sbjct: 177 LPGNPGSPDFSGNPGPPSFPRNPGSPEFPGN 207
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 153 GEKGLPGTHGKHGRPGLPGAPGQKGDQGLPGLP 251
G G P G G P P PG G PG P
Sbjct: 179 GNPGSPDFSGNPGPPSFPRNPGSPEFPGNPGAP 211
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 517 GLPGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGNKGQA 633
G P GP G PG G G+PG P G G G A
Sbjct: 246 GNPRSMGPPGFPGIGGPPGFPGTPFGGGGTGPTLGDGYA 284
>At3g24780.1 68416.m03110 hypothetical protein
Length = 715
Score = 35.9 bits (79), Expect = 0.023
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 145 VKPGRPVGPIGPVSPFSPIRPVKP 74
V P RPV P+ P+ P P+RPV+P
Sbjct: 72 VNPVRPVRPVRPIRPVRPVRPVRP 95
Score = 34.7 bits (76), Expect = 0.053
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -3
Query: 145 VKPGRPVGPIGPVSPFSPIRPVK 77
V+P RPV PI PV P P+RPV+
Sbjct: 75 VRPVRPVRPIRPVRPVRPVRPVR 97
>At3g02670.1 68416.m00258 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 217
Score = 35.1 bits (77), Expect = 0.040
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 153 GEKGLPGTHGKHGRPGLPGAPGQKGDQGLPGLPG 254
G G+PG G G PG+PG+PG + P PG
Sbjct: 109 GNPGIPGIPGIPGLPGIPGSPGFRLPFPFPSSPG 142
Score = 31.1 bits (67), Expect = 0.65
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Frame = +3
Query: 153 GEKGLPGTHGKH------GRPG-LPGAPGQKGDQGLPGLPGN 257
G G+PG+ G PG PG PG G GLPG+PG+
Sbjct: 87 GNPGIPGSPGFRLPFPFPSSPGGNPGIPGIPGIPGLPGIPGS 128
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 523 PGRTGPIGPPGQKGDRGYPGRPGLQGEQGMK 615
P + P G PG G G PG PG+ G G +
Sbjct: 102 PFPSSPGGNPGIPGIPGIPGLPGIPGSPGFR 132
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 8/46 (17%)
Frame = +2
Query: 395 GDRGEKGATGFGAP--------GQKGDQGPSGIPGLPGEKGDKGDR 508
G+ G G+ GF P G G G GIPGLPG G G R
Sbjct: 87 GNPGIPGSPGFRLPFPFPSSPGGNPGIPGIPGIPGLPGIPGSPGFR 132
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 7/41 (17%)
Frame = +1
Query: 517 GLPGRTG-------PIGPPGQKGDRGYPGRPGLQGEQGMKG 618
G+PG G P P G G G PG PGL G G G
Sbjct: 90 GIPGSPGFRLPFPFPSSPGGNPGIPGIPGIPGLPGIPGSPG 130
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 251 GKLGRPGIPGLPGEKGQKGDQG 316
G G PGIPG+PG G G G
Sbjct: 109 GNPGIPGIPGIPGLPGIPGSPG 130
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = -3
Query: 208 PGNPGLPCFP*VPGKPFSP-FIVK---PGRPVGPIGPVSPFSP 92
PG PG+P P +PG P SP F + P P G P P SP
Sbjct: 111 PGIPGIPGIPGLPGIPGSPGFRLPFPFPSSPGGGSIPGIPGSP 153
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 260 GRPGIPGLPGEKGQKGDQGN 319
G PGIPG+PG G G G+
Sbjct: 109 GNPGIPGIPGIPGLPGIPGS 128
Score = 23.4 bits (48), Expect(2) = 5.7
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 404 GEKGATGFGAPGQ-KGDQGPSGIPGLPGEKG 493
G G+ GF P G IPG+PG G
Sbjct: 124 GIPGSPGFRLPFPFPSSPGGGSIPGIPGSPG 154
Score = 23.0 bits (47), Expect(2) = 5.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 260 GRPGIPGLPG 289
G PGIPG PG
Sbjct: 87 GNPGIPGSPG 96
>At4g28520.3 68417.m04081 12S seed storage protein, putative /
cruciferin, putative strong similarity to SP|P33525
Cruciferin CRU1 precursor (11S globulin) (12S storage
protein) from Brassica napus; contains Pfam profile
PF00190 Cupin and Prosite 11-S plant seed storage
proteins signature PS00305 isoform contains
non-consensus AC acceptor splice site at intron 3
Length = 453
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 8/46 (17%)
Frame = +1
Query: 526 GRTGPIGPP----GQKGDRGYPGRP----GLQGEQGMKGNKGQAAE 639
GR G G P GQ+G +G G+P G QG+QG +G +GQ E
Sbjct: 134 GRQGQQGQPWEGQGQQGQQGRQGQPWEGQGQQGQQGRQGQQGQPWE 179
>At4g28520.2 68417.m04079 12S seed storage protein, putative /
cruciferin, putative strong similarity to SP|P33525
Cruciferin CRU1 precursor (11S globulin) (12S storage
protein) from Brassica napus; contains Pfam profile
PF00190 Cupin and Prosite 11-S plant seed storage
proteins signature PS00305 isoform contains
non-consensus AC acceptor splice site at intron 3
Length = 394
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 8/46 (17%)
Frame = +1
Query: 526 GRTGPIGPP----GQKGDRGYPGRP----GLQGEQGMKGNKGQAAE 639
GR G G P GQ+G +G G+P G QG+QG +G +GQ E
Sbjct: 134 GRQGQQGQPWEGQGQQGQQGRQGQPWEGQGQQGQQGRQGQQGQPWE 179
>At4g28520.1 68417.m04080 12S seed storage protein, putative /
cruciferin, putative strong similarity to SP|P33525
Cruciferin CRU1 precursor (11S globulin) (12S storage
protein) from Brassica napus; contains Pfam profile
PF00190 Cupin and Prosite 11-S plant seed storage
proteins signature PS00305 isoform contains
non-consensus AC acceptor splice site at intron 3
Length = 524
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 8/46 (17%)
Frame = +1
Query: 526 GRTGPIGPP----GQKGDRGYPGRP----GLQGEQGMKGNKGQAAE 639
GR G G P GQ+G +G G+P G QG+QG +G +GQ E
Sbjct: 134 GRQGQQGQPWEGQGQQGQQGRQGQPWEGQGQQGQQGRQGQQGQPWE 179
>At1g44222.1 68414.m05107 hypothetical protein
Length = 85
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 153 GEKGLPGTHGKHGRPGLPGAPGQKGDQGLPGLPGNWVG 266
G G+ G G GR G+ G PG G G+ G PG+ G
Sbjct: 24 GISGMVGRLGILGRLGMMGIPGMLGSHGMLGNPGSNTG 61
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 180 GKHGRPGLPGAPGQKGDQGLPGLPG 254
G+ GRPG+ G+PG G G+ G+ G
Sbjct: 3 GRLGRPGMLGSPGMLGILGMFGISG 27
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 517 GLPGRTGPIGPPGQKGDRGYPGRPG 591
G+ GR G +G PG G G G PG
Sbjct: 33 GILGRLGMMGIPGMLGSHGMLGNPG 57
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 251 GKLGRPGIPGLPGEKGQKGDQGN 319
G+LG GIPG+ G G G+ G+
Sbjct: 36 GRLGMMGIPGMLGSHGMLGNPGS 58
>At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C)
Length = 285
Score = 32.3 bits (70), Expect = 0.28
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 395 GDRGEKGATGFGAPGQKGDQGPSGIPGLPGEKGDKGDRD 511
G+RG+ G GFG G +GD+G G G G +G + +
Sbjct: 14 GERGDFGR-GFGGRGGRGDRGGRGRGGRGGRRGGRASEE 51
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 31.1 bits (67), Expect = 0.65
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 165 LPGTHGKHGRPGLPGAPGQKGDQGLP--GLPGNWV 263
+PG G G P GA G G+QGLP +PGN V
Sbjct: 255 VPGQLGGGGSPLSSGAGGGDGNQGLPVYNMPGNLV 289
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 30.7 bits (66), Expect = 0.86
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3
Query: 208 PGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGP 110
PG PG+P P +PG P +P I PG P P+ P
Sbjct: 365 PGLPGIPPVPLIPGIPPAPLI--PGIP--PLSP 393
>At5g57870.2 68418.m07239 eukaryotic translation initiation factor
4F, putative / eIF-4F, putative similar to SP|Q03387
Eukaryotic initiation factor (iso)4F subunit P82-34
(eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam
profiles PF02854: MIF4G domain, PF02847: MA3 domain
Length = 776
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +3
Query: 168 PGTHGKHGRPGLPGA-PGQKGDQGLPGLPG 254
PG GRPG G PG G + +PG+PG
Sbjct: 484 PGPVYPGGRPGAGGLMPGMPGTRRMPGMPG 513
>At5g57870.1 68418.m07238 eukaryotic translation initiation factor
4F, putative / eIF-4F, putative similar to SP|Q03387
Eukaryotic initiation factor (iso)4F subunit P82-34
(eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam
profiles PF02854: MIF4G domain, PF02847: MA3 domain
Length = 780
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +3
Query: 168 PGTHGKHGRPGLPGA-PGQKGDQGLPGLPG 254
PG GRPG G PG G + +PG+PG
Sbjct: 488 PGPVYPGGRPGAGGLMPGMPGTRRMPGMPG 517
>At1g15830.1 68414.m01900 expressed protein
Length = 483
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = +3
Query: 153 GEKGLPGT----HGKHGRPGLPGAPGQK-GDQGLPGLPG 254
GE +PG G G P +PGAP K G G P +PG
Sbjct: 115 GETVIPGAPPPIRGGGGEPAIPGAPPPKRGGGGEPVIPG 153
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = +3
Query: 153 GEKGLPGT----HGKHGRPGLPGAPGQK-GDQGLPGLPG 254
GE +PG G G P +PGAP K G G P +PG
Sbjct: 131 GEPAIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPG 169
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = +3
Query: 153 GEKGLPGT----HGKHGRPGLPGAPGQK-GDQGLPGLPG 254
GE +PG G G P +PGAP K G G P +PG
Sbjct: 147 GEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPG 185
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = +3
Query: 153 GEKGLPGT----HGKHGRPGLPGAPGQK-GDQGLPGLPG 254
GE +PG G G P +PGAP K G G P +PG
Sbjct: 163 GEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPG 201
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = +3
Query: 153 GEKGLPGT----HGKHGRPGLPGAPGQK-GDQGLPGLPG 254
GE +PG G G P +PGAP K G G P +PG
Sbjct: 179 GEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPG 217
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = +3
Query: 153 GEKGLPGT----HGKHGRPGLPGAPGQK-GDQGLPGLPG 254
GE +PG G G P +PGAP K G G P +PG
Sbjct: 195 GEPVIPGAPPPKRGGGGEPVIPGAPPPKRGGGGEPVIPG 233
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 157 SPFIVKPGRPVGPIGPVSPFSPIRPV 80
+P +PG P G P SPFSP P+
Sbjct: 2 NPMRDQPGSPYGDSTPRSPFSPFSPL 27
>At4g32375.1 68417.m04610 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:4325090;
contains Pfam profile PF00295: Polygalacturonase
(pectinase)
Length = 486
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -3
Query: 208 PGNPGLPCFP*VPGKPFSPFIVKPGRPVGPIGPVSP 101
P P P P KP +P KP R VGP+ P P
Sbjct: 366 PVEPPQQVEPPTPTKPLAP--AKPPRHVGPLMPTKP 399
>At4g25630.1 68417.m03691 fibrillarin 2 (FIB2) identical to
fibrillarin 2 GI:9965655 from [Arabidopsis thaliana]
Length = 320
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/69 (30%), Positives = 25/69 (36%)
Frame = +3
Query: 21 GLQGEKGDRGSLGEKGDQGFTGRMGEKGDXXXXXXXXXXXXXXKGEKGLPGTHGKHGRPG 200
G G +G G G +GD GF+G G G +G P G G G
Sbjct: 11 GFSGGRGRGGYSGGRGDGGFSGGRGGGG---RGGGRGFSDRGGRGRGRGPPRGGARGGRG 67
Query: 201 LPGAPGQKG 227
G G KG
Sbjct: 68 PAGRGGMKG 76
>At5g15410.2 68418.m01803 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC2) identical to
cyclic nucleotide-gated cation channel GI:3894399 from
[Arabidopsis thaliana]
Length = 593
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +1
Query: 322 RFGRATRSCRSNWTTW---NSWYYWGKRRSRREG 414
R R R SNW TW N W +RR R G
Sbjct: 520 RLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRG 553
>At5g15410.1 68418.m01804 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC2) identical to
cyclic nucleotide-gated cation channel GI:3894399 from
[Arabidopsis thaliana]
Length = 726
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +1
Query: 322 RFGRATRSCRSNWTTW---NSWYYWGKRRSRREG 414
R R R SNW TW N W +RR R G
Sbjct: 653 RLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRG 686
>At5g07510.1 68418.m00860 glycine-rich protein (GRP14) oleosin;
glycine-rich protein 14 (GRP14) PMID:11431566;
PIR:JQ1063
Length = 193
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 153 GEKGLPGTHGKHGRPGLPGAPGQKGDQGLPG 245
G G PG G G GLPG G G GLPG
Sbjct: 108 GRFGKPGGGGLGGG-GLPGGLGGLGGGGLPG 137
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 153 GEKGLPGTHGKHGRPGLPGA--PGQKGDQGLPGLPGNWVGL 269
G + G GK G GL G PG G G GLPG GL
Sbjct: 102 GGRRFGGRFGKPGGGGLGGGGLPGGLGGLGGGGLPGGLGGL 142
>At3g50570.1 68416.m05531 hydroxyproline-rich glycoprotein family
protein contains proline-rich protein domains,
INTERPRO:IPR000694
Length = 189
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 208 PGNPGLPCFP*VPGKPFSPFIV 143
P PGLP P +PG PF +V
Sbjct: 89 PNIPGLPNIPGLPGPPFESLLV 110
>At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein
low similarity to SP|P25583 Karyogamy protein KAR4
{Saccharomyces cerevisiae},
(N6-adenosine)-methyltransferase [Mus musculus]
GI:10179948; contains Pfam profile PF05063: MT-A70
(S-adenosylmethionine-binding subunit of human mRNA:m6A
methyl-transferase (MTase))
Length = 775
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 523 PGRTGPIGPPGQKGDRGYPGRPGLQGEQGMKGNKGQAA 636
PGRT + P +RGY G +G + ++G KG+ A
Sbjct: 380 PGRTNFVQTP----NRGYQTPQGTRGNRPLRGGKGRPA 413
>At1g31540.1 68414.m03869 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 776
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = -2
Query: 491 LSHQVILVYLRDLDHLF---ALVHQTQW 417
L HQ +L+ + DLD + LV QTQW
Sbjct: 290 LKHQKVLIIIDDLDDIMVLDTLVGQTQW 317
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,260,548
Number of Sequences: 28952
Number of extensions: 264405
Number of successful extensions: 1012
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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