Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30565
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.85 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   3.4  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   6.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   6.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.9  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 386 FGNILSLNRHHWYW 345
           F   L +N HHW+W
Sbjct: 197 FREDLGINLHHWHW 210


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 374 LSLNRHHWYW 345
           + LN HHW+W
Sbjct: 201 IGLNLHHWHW 210


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +1

Query: 430 LQYTVKH*IFRVAQLVGMNYGLVTVLYAHWCRRSRWRTGFSKSWIVLR 573
           L+  +   ++ V  LV  N    T+L A W    R    F  + I+LR
Sbjct: 155 LEIKIDEHLYPVVALVVKNLIKPTILGADWLNEQRAVIDFDNNEILLR 202


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 98  EFYWYDTVKEKSSHNVNPVTSNYGMDILYCT*M 196
           + Y   T    SS+ ++P+T  Y M+ + C  M
Sbjct: 5   KLYSDSTTMATSSNAMSPMTPTYSMNSMSCVSM 37


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 72  WCSRRSWKS 46
           WC RR W S
Sbjct: 119 WCPRREWSS 127


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 72  WCSRRSWKS 46
           WC RR W S
Sbjct: 275 WCPRREWSS 283


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 711 FRVWRSGTLNC*LSSTVVSQKLSLFA 634
           FRV  +G LNC +  ++ +  LS+ +
Sbjct: 282 FRVINAGFLNCPIEVSIDNHTLSVIS 307


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 266 WHCTNFLTQEPAYP 225
           W C   + Q PAYP
Sbjct: 27  WECLAPIPQPPAYP 40


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 211  GLFRCHLCT 185
            GLF+C LCT
Sbjct: 1115 GLFKCMLCT 1123


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 211  GLFRCHLCT 185
            GLF+C LCT
Sbjct: 1115 GLFKCMLCT 1123


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 211  GLFRCHLCT 185
            GLF+C LCT
Sbjct: 1115 GLFKCMLCT 1123


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 211  GLFRCHLCT 185
            GLF+C LCT
Sbjct: 1115 GLFKCMLCT 1123


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 614 GGTCHHFANKLS 649
           GGTCH   N  S
Sbjct: 234 GGTCHDLVNSFS 245


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 266 WHCTNFLTQEPAYP 225
           W C   + Q PAYP
Sbjct: 27  WECLAPIPQPPAYP 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,721
Number of Sequences: 336
Number of extensions: 4293
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)