Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30564
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 93 1e-18
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 93 1e-18
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 93 1e-18
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 93 1e-18
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 93 1e-18
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 93 1e-18
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 93 1e-18
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 93 1e-18
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 92 2e-18
AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein. 56 1e-07
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 92.7 bits (220), Expect = 1e-18
Identities = 42/99 (42%), Positives = 69/99 (69%)
Frame = +3
Query: 213 AIEEFGRLLTT*CQKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 392
A+ F L ++ +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 393 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 509
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 54.8 bits (126), Expect = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 14 DVDELFDVKNAFYVGNYQQAINEAQSVTLLHP 109
+VDELFDVKNAFY+G+YQQ INEAQ V L P
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSP 46
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 100 STPLVALQRDAFLYRSYIAQGNYRIVQQELK-TADPMLQPLKSLVDY 237
S+P ++RD FLYR+Y+AQ + +V E+K ++ P LQ ++ DY
Sbjct: 44 SSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADY 90
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 509 TQLAQAWLNLIQGGPGIQDAHYSVMELSE 595
TQLA AW++L GG +QDA+Y E+++
Sbjct: 182 TQLATAWVSLATGGEKLQDAYYIFQEMAD 210
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 92.7 bits (220), Expect = 1e-18
Identities = 42/99 (42%), Positives = 69/99 (69%)
Frame = +3
Query: 213 AIEEFGRLLTT*CQKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 392
A+ F L ++ +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 393 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 509
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 54.8 bits (126), Expect = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 14 DVDELFDVKNAFYVGNYQQAINEAQSVTLLHP 109
+VDELFDVKNAFY+G+YQQ INEAQ V L P
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSP 46
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 100 STPLVALQRDAFLYRSYIAQGNYRIVQQELK-TADPMLQPLKSLVDY 237
S+P ++RD FLYR+Y+AQ + +V E+K ++ P LQ ++ DY
Sbjct: 44 SSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADY 90
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 509 TQLAQAWLNLIQGGPGIQDAHYSVMELSE 595
TQLA AW++L GG +QDA+Y E+++
Sbjct: 182 TQLATAWVSLATGGEKLQDAYYIFQEMAD 210
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 92.7 bits (220), Expect = 1e-18
Identities = 42/99 (42%), Positives = 69/99 (69%)
Frame = +3
Query: 213 AIEEFGRLLTT*CQKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 392
A+ F L ++ +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 393 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 509
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 54.8 bits (126), Expect = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 14 DVDELFDVKNAFYVGNYQQAINEAQSVTLLHP 109
+VDELFDVKNAFY+G+YQQ INEAQ V L P
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSP 46
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 100 STPLVALQRDAFLYRSYIAQGNYRIVQQELK-TADPMLQPLKSLVDY 237
S+P ++RD FLYR+Y+AQ + +V E+K ++ P LQ ++ DY
Sbjct: 44 SSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADY 90
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 509 TQLAQAWLNLIQGGPGIQDAHYSVMELSE 595
TQLA AW++L GG +QDA+Y E+++
Sbjct: 182 TQLATAWVSLATGGEKLQDAYYIFQEMAD 210
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 92.7 bits (220), Expect = 1e-18
Identities = 42/99 (42%), Positives = 69/99 (69%)
Frame = +3
Query: 213 AIEEFGRLLTT*CQKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 392
A+ F L ++ +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 393 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 509
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 54.8 bits (126), Expect = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 14 DVDELFDVKNAFYVGNYQQAINEAQSVTLLHP 109
+VDELFDVKNAFY+G+YQQ INEAQ V L P
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSP 46
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 100 STPLVALQRDAFLYRSYIAQGNYRIVQQELK-TADPMLQPLKSLVDY 237
S+P ++RD FLYR+Y+AQ + +V E+K ++ P LQ ++ DY
Sbjct: 44 SSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADY 90
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 509 TQLAQAWLNLIQGGPGIQDAHYSVMELSE 595
TQLA AW++L GG +QDA+Y E+++
Sbjct: 182 TQLATAWVSLATGGEKLQDAYYIFQEMAD 210
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 92.7 bits (220), Expect = 1e-18
Identities = 42/99 (42%), Positives = 69/99 (69%)
Frame = +3
Query: 213 AIEEFGRLLTT*CQKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 392
A+ F L ++ +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 393 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 509
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 54.8 bits (126), Expect = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 14 DVDELFDVKNAFYVGNYQQAINEAQSVTLLHP 109
+VDELFDVKNAFY+G+YQQ INEAQ V L P
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSP 46
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 100 STPLVALQRDAFLYRSYIAQGNYRIVQQELK-TADPMLQPLKSLVDY 237
S+P ++RD FLYR+Y+AQ + +V E+K ++ P LQ ++ DY
Sbjct: 44 SSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADY 90
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 509 TQLAQAWLNLIQGGPGIQDAHYSVMELSE 595
TQLA AW++L GG +QDA+Y E+++
Sbjct: 182 TQLATAWVSLATGGEKLQDAYYIFQEMAD 210
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 92.7 bits (220), Expect = 1e-18
Identities = 42/99 (42%), Positives = 69/99 (69%)
Frame = +3
Query: 213 AIEEFGRLLTT*CQKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 392
A+ F L ++ +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 393 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 509
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 54.8 bits (126), Expect = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 14 DVDELFDVKNAFYVGNYQQAINEAQSVTLLHP 109
+VDELFDVKNAFY+G+YQQ INEAQ V L P
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSP 46
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 100 STPLVALQRDAFLYRSYIAQGNYRIVQQELK-TADPMLQPLKSLVDY 237
S+P ++RD FLYR+Y+AQ + +V E+K ++ P LQ ++ DY
Sbjct: 44 SSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADY 90
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 509 TQLAQAWLNLIQGGPGIQDAHYSVMELSE 595
TQLA AW++L GG +QDA+Y E+++
Sbjct: 182 TQLATAWVSLATGGEKLQDAYYIFQEMAD 210
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 92.7 bits (220), Expect = 1e-18
Identities = 42/99 (42%), Positives = 69/99 (69%)
Frame = +3
Query: 213 AIEEFGRLLTT*CQKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 392
A+ F L ++ +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 82 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 141
Query: 393 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 509
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 142 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 180
Score = 53.6 bits (123), Expect = 7e-07
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +2
Query: 2 RHQQDVDELFDVKNAFYVGNYQQAINEAQSVTLLHP 109
R +VDELFDVKNAFY+G+YQQ INEA V L P
Sbjct: 10 RGSGEVDELFDVKNAFYIGSYQQCINEAHGVKLSSP 45
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 100 STPLVALQRDAFLYRSYIAQGNYRIVQQELK-TADPMLQPLKSLVDY 237
S+P ++RD FLYR+Y+AQ + +V E+K ++ P LQ ++ DY
Sbjct: 43 SSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADY 89
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 509 TQLAQAWLNLIQGGPGIQDAHYSVMELSE 595
TQLA AW++L GG +QDA+Y E+++
Sbjct: 181 TQLATAWVSLATGGEKLQDAYYIFQEMAD 209
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 92.7 bits (220), Expect = 1e-18
Identities = 42/99 (42%), Positives = 69/99 (69%)
Frame = +3
Query: 213 AIEEFGRLLTT*CQKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 392
A+ F L ++ +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 20 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 79
Query: 393 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 509
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 80 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 118
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 509 TQLAQAWLNLIQGGPGIQDAHYSVMELSE 595
TQLA AW++L GG +QDA+Y E+++
Sbjct: 119 TQLATAWVSLATGGEKLQDAYYIFQEMAD 147
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/99 (42%), Positives = 69/99 (69%)
Frame = +3
Query: 213 AIEEFGRLLTT*CQKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 392
A+ F L ++ +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNITFLLMAASIYLHDQNPDAALRALHQ 142
Query: 393 AESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 509
+SLE A T+Q LL ++R DLARK+LK +QD+++D TL
Sbjct: 143 GDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATL 181
Score = 54.8 bits (126), Expect = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 14 DVDELFDVKNAFYVGNYQQAINEAQSVTLLHP 109
+VDELFDVKNAFY+G+YQQ INEAQ V L P
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSP 46
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 100 STPLVALQRDAFLYRSYIAQGNYRIVQQELK-TADPMLQPLKSLVDY 237
S+P ++RD FLYR+Y+AQ + +V E+K ++ P LQ ++ DY
Sbjct: 44 SSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADY 90
Score = 35.5 bits (78), Expect = 0.19
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 509 TQLAQAWLNLIQGGPGIQDAHYSVMELSE 595
TQLA AW++L GG +QDA+Y E+++
Sbjct: 182 TQLATAWVSLATGGEKLQDAYYIFQEMAD 210
>AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein.
Length = 147
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/65 (36%), Positives = 43/65 (66%)
Frame = +3
Query: 213 AIEEFGRLLTT*CQKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHN 392
A+ F L ++ +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH
Sbjct: 83 AVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQ 142
Query: 393 AESLE 407
+SLE
Sbjct: 143 GDSLE 147
Score = 54.8 bits (126), Expect = 3e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 14 DVDELFDVKNAFYVGNYQQAINEAQSVTLLHP 109
+VDELFDVKNAFY+G+YQQ INEAQ V L P
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSP 46
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 100 STPLVALQRDAFLYRSYIAQGNYRIVQQELK-TADPMLQPLKSLVDY 237
S+P ++RD FLYR+Y+AQ + +V E+K ++ P LQ ++ DY
Sbjct: 44 SSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADY 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,662,778
Number of Sequences: 237096
Number of extensions: 1933824
Number of successful extensions: 4729
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4729
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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