Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30562X
         (492 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   1.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.1  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.0  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -3

Query: 274 QSEMLSRQKSWFIIAYQPQSPLSSEFIITFDSSCVTLCCKCVKKQQ 137
           QS+ L+      ++  +P +P   E       +  T C KC  KQ+
Sbjct: 37  QSDRLTENYVNCLLEKKPCTPDGEELKRVLPDALKTSCAKCTDKQK 82


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 141 CFLTHLQHRVTHDESNVI 194
           C++T+    + H ESN+I
Sbjct: 147 CYVTYAWSPIDHTESNII 164


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 135  DCCFLTHLQHRVTHDESNVIMNSDDSGDC 221
            D C+ T  +  +  +ES  +++  D+ DC
Sbjct: 1377 DACYSTIEEKNLQVNESGKLIHKIDAQDC 1405


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 275 CSCWSFLLYFYYIF 316
           C  WS+  Y  YIF
Sbjct: 123 CFFWSYQSYMSYIF 136


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 275 CSCWSFLLYFYYIF 316
           C  WS+  Y  YIF
Sbjct: 123 CFFWSYQSYMSYIF 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,904
Number of Sequences: 336
Number of extensions: 2320
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)