Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30561X
(508 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.059
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 33 0.14
SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3) 33 0.18
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 32 0.24
SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) 32 0.24
SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11) 32 0.24
SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19) 31 0.41
SB_35732| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_21397| Best HMM Match : Tropomodulin (HMM E-Value=0) 31 0.72
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 31 0.72
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 31 0.72
SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_58769| Best HMM Match : XPA_C (HMM E-Value=0.01) 30 0.95
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 30 0.95
SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 30 0.95
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 30 0.95
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_22299| Best HMM Match : Protamine_P2 (HMM E-Value=2.4) 30 1.3
SB_58858| Best HMM Match : zf-CXXC (HMM E-Value=7.2) 29 1.7
SB_34623| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 29 2.9
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 29 2.9
SB_20947| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 29 2.9
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 29 2.9
SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_38149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_19407| Best HMM Match : SURF6 (HMM E-Value=0.43) 28 5.1
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 28 5.1
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_33649| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_25419| Best HMM Match : PH (HMM E-Value=2.8e-16) 28 5.1
SB_37598| Best HMM Match : TrbF (HMM E-Value=0.3) 27 6.7
SB_3385| Best HMM Match : 3_5_exonuc (HMM E-Value=0.0015) 27 6.7
SB_52343| Best HMM Match : OTU (HMM E-Value=0.0036) 27 6.7
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 27 6.7
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 27 6.7
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_23874| Best HMM Match : SSIII (HMM E-Value=5.4) 27 8.9
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 27 8.9
SB_16859| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 27 8.9
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_39563| Best HMM Match : Ctr (HMM E-Value=0.39) 27 8.9
SB_32735| Best HMM Match : DUF465 (HMM E-Value=1.7) 27 8.9
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 27 8.9
SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14) 27 8.9
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 34.3 bits (75), Expect = 0.059
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +1
Query: 79 IEEKRQRLEEAEKKRQAMLQAMKDA 153
+EE+R+RLE EK+RQA QAM++A
Sbjct: 319 LEEERKRLENLEKERQAAQQAMQEA 343
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 350 VHRQTRDREIRSRREAKETGLRLKRARRKTKQQLRHKALKK 472
+ RQ R + R RR + + R +R RR+ + QLR K +K
Sbjct: 681 IRRQRRRKRRRKRRRQRRSRRRRRRRRRRRRSQLRRKRRRK 721
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 356 RQTRDREIRSRREAKETGLRLKRARRKTKQQLRHKALKK 472
R+ R R R RR+ + R +R RRK +++ R A +K
Sbjct: 487 RRRRRRRRRRRRQRRRRRRRRRRNRRKRRRRKRRTARRK 525
>SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3)
Length = 1168
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/60 (26%), Positives = 35/60 (58%)
Frame = +1
Query: 76 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 255
++EEK++RL+ E+ + ++ +A K+ASK+ + T + +S N ++ K ++E
Sbjct: 427 EVEEKKRRLQRYERLQSSLNEAYKEASKSSVDGT-RDESRNEEITQTSCNETSGKTPIKE 485
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 32.3 bits (70), Expect = 0.24
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +1
Query: 79 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 255
+EE+R+R EEAEKKR+ + ++ + + KK E L QLER K +++ E
Sbjct: 252 MEEERKRKEEAEKKREEEERKRREEEEAAQKW---KKEEL--LRQQQLEREKEEQERAE 305
>SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09)
Length = 787
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 82 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 255
+ ++ L + EKK Q ML+ K A+K P F ++ +EN G A+ N +++LEE
Sbjct: 607 QRNKEALAKKEKKIQEMLEEEKKATKFEP-FNLE--TENRGSVKAEKWLNSVQQELEE 661
>SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11)
Length = 806
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +2
Query: 335 PGTLGVHRQTRDREIRSRREAKETGLRLKRARRKTKQQLRHKALKK 472
PG + ++ ++RE R RREA+E L RA+R+ + ++R + +KK
Sbjct: 599 PGLNWLEKERKEREERERREAEEAAL---RAQREEEWRVRLQEVKK 641
>SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19)
Length = 431
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/43 (34%), Positives = 30/43 (69%)
Frame = +3
Query: 318 KLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELEERQSS 446
+++QK +E E ++K E E+ +ER++ + ++ELEER++S
Sbjct: 121 EIKQKQKEQEE-LIKKEQERIKEQERKRAEQQLVRELEERENS 162
>SB_35732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 31.1 bits (67), Expect = 0.55
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = +2
Query: 170 TSPSKRRAKTSV*AMPSWS--ATRPR--SSWKREEDLPVHPHQAA 292
TS +RR + ++ P WS A PR S W+RE+ + +PH+A+
Sbjct: 7 TSGQRRREENAITKTP-WSLHAKSPRGHSPWRREDSINANPHEAS 50
>SB_21397| Best HMM Match : Tropomodulin (HMM E-Value=0)
Length = 373
Score = 30.7 bits (66), Expect = 0.72
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 251 KREEDLPVHPHQAADHRGSLRRQTPTEGPGTLGVHRQ-TRDREIRSRREAKETGLRLKRA 427
KR++ +P+ P +D + + E G LG+H T ++ ++ REA + L+
Sbjct: 100 KRDDPVPMLPDDLSDVLENATEEQLLELAGVLGIHSMLTSEQSHQAEREASDRFLKGSGL 159
Query: 428 RRKTKQQLRHKALKK 472
++ T ++ LKK
Sbjct: 160 KKYTPGIVKGTKLKK 174
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 30.7 bits (66), Expect = 0.72
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 82 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSEN 198
EE+RQ+ EEA K+R+ L A K++SK+ +++S N
Sbjct: 1344 EERRQKREEARKRREEKL-AKKESSKSSNKRKSKERSGN 1381
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 30.7 bits (66), Expect = 0.72
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +2
Query: 224 SATRPRSSWKREEDLPVHPHQAADHRGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKE 403
SA+ PRS KREE+ P ++ R P G + + R R RRE
Sbjct: 287 SASAPRSRGKREENSVSPPRRSKGRREENSVSPPRRSKGRREDNSVSPPRGNRGRREKNS 346
Query: 404 TGLRLKRARRK 436
+R RR+
Sbjct: 347 ASPSRRRGRRE 357
>SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2391
Score = 30.7 bits (66), Expect = 0.72
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 132 APGHE--RCQQDRTQLHHPKEERKLRFEQ 212
APGH+ RC QD +L+ K ERK R EQ
Sbjct: 1105 APGHQPLRCLQDVEELYLSKVERKDRLEQ 1133
>SB_58769| Best HMM Match : XPA_C (HMM E-Value=0.01)
Length = 123
Score = 30.3 bits (65), Expect = 0.95
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 288 PLTIEGLSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELEERQ 440
P+ I LS +++ KA E+W + KLE EK + +QK+ + + K EE++
Sbjct: 54 PMKIFKLS--EVKSKAVEVWGSLEKLEDEK--TKRKQKKVNVETKNEEEKR 100
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 30.3 bits (65), Expect = 0.95
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 176 PSKRRAKTSV*AMPSWSATRPRSSWKR-EEDLPVHPHQAADHRGSLRRQTPTEGPGTLGV 352
PS R + S A P A R++ KR +E P + H+ R +TP EG
Sbjct: 23 PSPFRPEISE-AEPDKGAACYRANTKRRQEQKPPEEGKNKKHQKKARTETPEEGK----- 76
Query: 353 HRQTRDREIRSRREAKETGLRLKRARRKTKQQ 448
+R TR R+ + E + KRAR +T ++
Sbjct: 77 NRNTRRRQEQKLPEEGKNKKHQKRARTETTRR 108
>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
Length = 662
Score = 30.3 bits (65), Expect = 0.95
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 215 PSWSATRPRSSWKREEDLPVHP-HQAADHRG-SLRRQTPTEGPGTLG 349
P AT+P+S +++ HP HQ H G SL Q P GPG LG
Sbjct: 191 PPEHATQPQSLPDQQQQQ--HPGHQQQQHPGQSLLGQQPQSGPGQLG 235
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 30.3 bits (65), Expect = 0.95
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +3
Query: 315 DKLRQKAQE----LWECIVKLETEKYDLEERQKRQDYDLKELEERQSSN*GTKLSRRVST 482
DKL Q ++ L E KLETEK +L+ER + + +E++ER + L+ +V++
Sbjct: 908 DKLEQTSKRYEALLDELTAKLETEKMELQERLTKNN---EEMQERMKTEFAEHLASKVAS 964
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 30.3 bits (65), Expect = 0.95
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 326 SEFVDGETLDGQRLDADGQGD 264
S+ VDG+ +DG +D DG GD
Sbjct: 607 SDSVDGDNVDGDSVDGDGDGD 627
>SB_22299| Best HMM Match : Protamine_P2 (HMM E-Value=2.4)
Length = 488
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +2
Query: 140 P*KMPARPDPTSPSKRRAKTSV*AMPSWSATRPRSSWKREEDLPVHPHQAA-DHRGSLRR 316
P K ARP + R+ KTS + P + + +++ P QA+ + S
Sbjct: 112 PKKQAARPREARKASRKTKTSKKSKPQDQDKQDKQDQDKQDKQAARPRQASCKTKTSKLH 171
Query: 317 QTPTEGPGTLGVHRQTRDREIRSRREAKETGLRLKRARRKTKQ 445
+ R+T+ + + +++ + T R ++ARR +++
Sbjct: 172 DQDKQAARPRQASRKTKTSKPQDKQDKQATRPRPRQARRASRK 214
>SB_58858| Best HMM Match : zf-CXXC (HMM E-Value=7.2)
Length = 168
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 365 RDREIRSRREAKETGLRLKRARRKTKQQLRHK-ALKKGLDPEALTGK 502
R RE++ R+ ++ RLK R TK + RH+ A +KG +GK
Sbjct: 38 RAREVKLTRKERKISRRLKLTRWDTKMERRHRGAEEKGTQGGVGSGK 84
>SB_34623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 342 LWECIVKLETEKYDLEERQKRQDYDLKE 425
L +C+ KL+TEK LE+R + DLK+
Sbjct: 105 LADCLAKLKTEKNSLEQRLSCIEQDLKQ 132
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKK-SENFGLSNAQLERNKTKEQLEE 255
EE+R++ EEAE++R+ + K + +QK+ E Q + + K+++ E
Sbjct: 636 EERRRQQEEAERQRREQEEVFKQQEQQRQQLELQKRQQEQQRQQELQKRQQEEKQRMAE 694
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 233 RPRSSWK-REEDLPVHPHQAADHRGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKETG 409
+ RS K +E+ P ++ H S R+ + + +RDR+ +SRR ++
Sbjct: 258 KERSKSKDQEKSTPRERRNSSSHHRSSSREKDRKSSMDKSIRSSSRDRDKKSRRSWSKSK 317
Query: 410 LRLKRARRKT 439
R + R KT
Sbjct: 318 ERDSKLREKT 327
>SB_20947| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 299 RGSLRRQTPTEGPGTLGVHRQTRDRE-IRSRREAKETGLRLKRARRKT 439
RG+L +Q T+ L +H QTR ++ + S R + + + RRKT
Sbjct: 15 RGALAKQNFTDADYALKLHNQTRPKQSLESMRAPELSDYYIPAKRRKT 62
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 155 ARPDPTSPSKRRAKTSV*AMPSWSATRPRSSWKR 256
ARP P+ +K KT MP S P+SSW R
Sbjct: 290 ARPRPSCKTKPSPKTKT--MPPRSRLEPQSSWNR 321
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 76 DIEEKRQRLEEAEKKRQAMLQAMKD 150
D+EEK + LEEA+ + +A+ MKD
Sbjct: 522 DLEEKAKELEEAKSENEAISGKMKD 546
>SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +1
Query: 82 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE 252
EEKR EEA K+++++ + + + K T +K+ E ++ N+ ++ E
Sbjct: 459 EEKRTESEEAPKRKKSLKRRLSFSRKNKAKKTEEKQDEEGEAREGTMDDNEVSQKPE 515
>SB_38149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 375 KYDLEERQKRQDYDLKELEERQSSN*GTKLSRRVSTPKRSQAST 506
KYD E RQ + + ++ SS+ + V TPK S+ ST
Sbjct: 9 KYDHESRQSNTENIVDTVKSSSSSSSSDNQAVTVDTPKHSKKST 52
>SB_19407| Best HMM Match : SURF6 (HMM E-Value=0.43)
Length = 443
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/87 (21%), Positives = 40/87 (45%)
Frame = +3
Query: 144 ERCQQDRTQLHHPKEERKLRFEQCPXXXXXXXXXXXREKKISLSIRIKPLTIEGLSVDKL 323
+R ++++ + H KE + CP +++++ R++ ++ + K
Sbjct: 334 QRMREEQETVRHFKERYEEFPCPCPEPSARSRPKRSQKRRVQKIWRLRAGVLQAAEMKKK 393
Query: 324 RQKAQELWECIVKLETEKYDLEERQKR 404
RQKAQ L E K++ EK R+ +
Sbjct: 394 RQKAQSLAE-RKKIKKEKKKSNPRRSK 419
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNA-QLERNKTKEQLEE 255
EE+RQ+ EEA K+R+ L + T + ++K G S A + +K E +E
Sbjct: 537 EERRQKREEARKRREEKLAKKGPTTSTSSSRKRRRKFNRNGRSAAIKAAASKLSENEDE 595
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.9 bits (59), Expect = 5.1
Identities = 25/108 (23%), Positives = 41/108 (37%)
Frame = +2
Query: 146 KMPARPDPTSPSKRRAKTSV*AMPSWSATRPRSSWKREEDLPVHPHQAADHRGSLRRQTP 325
K ARP + R+ KTS A RP K +D + A + + +
Sbjct: 426 KQAARPRQARQASRKTKTSKPQDQDKQAARPSCKTKL-QDQDKQSSRQASRKAKTSKTSR 484
Query: 326 TEGPGTLGVHRQTRDREIRSRREAKETGLRLKRARRKTKQQLRHKALK 469
+ G +R+T+ + ++ + R KR +K KQ K K
Sbjct: 485 QQNQQAPGPYRKTKTSKTSKPQDQDKQDKRDKR-EKKDKQGASRKTSK 531
>SB_33649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 723
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 299 RGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKETGLRLKRARRKTKQQLRHKALKKGL 478
RGSL +Q + L ++ QTR + R +G R + RR + LR+ ++ L
Sbjct: 646 RGSLAKQNLNDTDYALKLYNQTRPGGLSDTRLPHGSGPRSRTRRRGERTCLRNG--QRDL 703
Query: 479 DPE 487
DP+
Sbjct: 704 DPQ 706
>SB_25419| Best HMM Match : PH (HMM E-Value=2.8e-16)
Length = 453
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 357 VKLETEKYDLEERQKRQDYDLKELEERQS 443
+KLE E +EE+Q++Q LK+ EE ++
Sbjct: 60 LKLEKEHQRMEEQQRQQQEALKQAEEERA 88
>SB_37598| Best HMM Match : TrbF (HMM E-Value=0.3)
Length = 419
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 284 QAADH-RGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKE 403
QA H RGSL +Q T+ L ++ QTR ++ + A E
Sbjct: 345 QAQSHERGSLAKQNFTDTDYALNLYNQTRPKQSLEKMRASE 385
>SB_3385| Best HMM Match : 3_5_exonuc (HMM E-Value=0.0015)
Length = 437
Score = 27.5 bits (58), Expect = 6.7
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 224 SATRPRSSWKREEDLPVH-PHQAADHRGSLRRQTPTEGPGT-LGVHRQTRDREIRSRREA 397
S +S+WK+ + P + A D SLR + G LGV R +++
Sbjct: 288 SKRHQQSNWKKSDLSPGQVAYAATDAWVSLRVYQEMKRHGERLGVDMMPPYRTLQNYTND 347
Query: 398 KETGLRLKRARRKTKQQLRHKALK 469
RLKR R K +Q+ + K +K
Sbjct: 348 VRDSRRLKRLRYKRRQKEQRKIVK 371
>SB_52343| Best HMM Match : OTU (HMM E-Value=0.0036)
Length = 1014
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 152 PARPDPTSPSKRRAKTSV*AMPSWSATRPRSSWKREEDLP 271
PA P SP+++R K S A+ +W + ++ K E +P
Sbjct: 899 PADPSAASPARKRRKRSSFALGAWGG-KTDTALKSENSVP 937
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 258 KKISLSIRIKPLTIEGLSVDK--LRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELE 431
KK+ + + T +S +K L +K EL + ++ E + L +++ +QD + +LE
Sbjct: 1012 KKLEEDLSLVEDTNSKISKEKKTLEEKLNELDQALIDEEEKSKGLAKQKAKQDAMIADLE 1071
Query: 432 ER 437
ER
Sbjct: 1072 ER 1073
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 306 LSVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELEERQ 440
+ V RQK QE I L+ E +LE + + DLK + E++
Sbjct: 545 MEVSMTRQKLQEAEAKIRSLQEECKNLESQLNMANTDLKNIREKE 589
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 356 RQTRDREIRSRREAKETGLRLKRARRKTKQQLRHKALKKGLDPE 487
++ R+RE R++ +E R+KR + + Q +H A +KG D +
Sbjct: 1681 KREREREEERRKDVRE---RMKRRVEEIRAQRQHVAEQKGRDQQ 1721
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 97 RLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 255
R + E++RQA + ++DA + I+++ E A LER + +E+ E
Sbjct: 574 RRQRTERQRQAKAREVRDAREKERQDRIRRERERIARERA-LERERERERERE 625
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 330 KAQELWECIVKLETEKYDLEERQKRQDYDLKELE 431
+ EL +ET+ +ERQ +D +KELE
Sbjct: 333 RVSELQNMFTSMETQLQKSQERQVEKDNQIKELE 366
>SB_23874| Best HMM Match : SSIII (HMM E-Value=5.4)
Length = 224
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 318 KLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELEERQSSN*GTKLSRRVSTPKRSQ 497
K+RQK QE + + E EK E ++R+ K+LEE + R+ + S+
Sbjct: 15 KMRQKRQEEDKAKKEAEMEKKRRREERQREAEAQKKLEEERRQQEEEIRRARLQQERLSR 74
Query: 498 AS 503
AS
Sbjct: 75 AS 76
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1
Query: 82 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 255
++KR+R E+ K+RQ L+ K+ + I+K+ +L + KE+ +E
Sbjct: 914 KDKREREEKERKRRQQQLE--KEKKEKEKKLLIEKEKREKEKQKERLREKEEKEKQKE 969
>SB_16859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 76 DIEEKR--QRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTK 240
D E++ +R + ++ L+A K S GP T KS N L + +R KT+
Sbjct: 9 DTSERKSFKRRHSSTTSQENNLKAFKGISHNGPTKTTSTKSNNKPLKLDKSKRGKTR 65
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 27.1 bits (57), Expect = 8.9
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 14/133 (10%)
Frame = +2
Query: 146 KMPARPDPTSPSKRRAKTSV*AMPSWSATRPRSSWKR------EEDLPVHPHQAADHRGS 307
K ARP S R+ KTS ATRPR + ++ ++ P QA+ +
Sbjct: 539 KQAARPRQAS---RKTKTSKPQDQEKQATRPRQASRKTKTSKPQDKQAARPKQASRKTKT 595
Query: 308 LRRQTPTE----GPGTLGVHRQTRDREIRSR----REAKETGLRLKRARRKTKQQLRHKA 463
+ P + P + Q +D++ SR R+ ++ R ++A RKTK +
Sbjct: 596 SKTSKPQDKQDARPASRRTKPQDQDKQDASRKTKTRKPQDQAARPRQASRKTKTSKQPDQ 655
Query: 464 LKKGLDPEALTGK 502
K+ P + K
Sbjct: 656 DKQDARPRQASRK 668
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 27.1 bits (57), Expect = 8.9
Identities = 23/89 (25%), Positives = 36/89 (40%)
Frame = +2
Query: 182 KRRAKTSV*AMPSWSATRPRSSWKREEDLPVHPHQAADHRGSLRRQTPTEGPGTLGVHRQ 361
+RR +S PS RP + +D + R ++P G G R+
Sbjct: 113 RRRRSSSSERQPSTFFGRPLARRDNRDDRRESSLDRSSKWDRSRDRSPDRGYDDSGSGRR 172
Query: 362 TRDREIRSRREAKETGLRLKRARRKTKQQ 448
RD+ I +RR+ E G+ L + QQ
Sbjct: 173 ERDKSIAARRD--EGGVNLNNWGTQNVQQ 199
>SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 356 RQTRDR-EIRSRREAKETGLRLKRARRKTKQQLRHKALKKGLDPE 487
R +DR E R RR + + K RR++K++ KKG D E
Sbjct: 107 RDKKDRKEKRDRRSKERSKDESKEERRRSKERENSPDAKKGKDKE 151
>SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 166 PNFTIQKKSENFGLSNAQLERNKTKEQLEE 255
P T + EN GLSN L ++KTK E
Sbjct: 498 PTPTSSQTQENIGLSNGTLTQDKTKPGCSE 527
>SB_39563| Best HMM Match : Ctr (HMM E-Value=0.39)
Length = 258
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 146 KMPARPDPTSPSKRRAKTSV*AMPSWSATRPRSS 247
++ A PT P+ R+A+ S+ PS+S +R +++
Sbjct: 194 QLSAEASPTQPTVRKAEHSIEPNPSYSKSRGKTA 227
>SB_32735| Best HMM Match : DUF465 (HMM E-Value=1.7)
Length = 87
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 318 KLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELE 431
+L ++ ++L E KLE +K DLE R + DLK+L+
Sbjct: 50 ELNERIEKLEEKNDKLELDKEDLEIRLEFSRNDLKKLQ 87
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 315 DKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELEERQSS 446
DKLRQ+ L + +L+ +K DLE + R L EL +++
Sbjct: 2493 DKLRQEVSVLKQNFGQLQNDKEDLEIERDRVKRHLAELTAEKNT 2536
>SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14)
Length = 869
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 272 VHPHQAADHRGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKET 406
+HP+ +D RG RR + G HR+ + + R A +T
Sbjct: 692 IHPYNRSDERGGRRRAYGSRGGEAKAGHRRRKGQPPNDVRAAWKT 736
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.300 0.115 0.292
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,079,918
Number of Sequences: 59808
Number of extensions: 203359
Number of successful extensions: 813
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)
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