Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30560X
         (438 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0150 + 1256029-1256137,1256206-1256247,1256345-1256455,125...    29   1.2  
06_01_0717 - 5219848-5220178,5220268-5220617,5221807-5221982,522...    29   1.2  
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57...    28   3.8  
02_01_0475 + 3422629-3422695,3422960-3423216                           27   5.0  
04_03_0647 + 18367321-18367675,18368044-18368885                       27   6.6  

>11_01_0150 +
           1256029-1256137,1256206-1256247,1256345-1256455,
           1256538-1256600,1256678-1256910,1256999-1257223,
           1257319-1257411,1257493-1257591,1257840-1257956
          Length = 363

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 119 KKSEQQATEKVKIDIKLLDLYENSEPDVYVRTSTEEEHGHYSYLW 253
           K S+   TE+  I   + D +EN +PD+ +    +E   H   LW
Sbjct: 169 KWSDISNTEQEHIFASITDKFENEDPDIKIDVYKDEIMEHAKSLW 213


>06_01_0717 -
           5219848-5220178,5220268-5220617,5221807-5221982,
           5222065-5222302,5224492-5224657,5224792-5225159,
           5225261-5225436,5227742-5227976,5228242-5228493,
           5228513-5228848
          Length = 875

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 341 SSDTTVPLLQR*VNPAAPKRTAALYTSSCS 430
           SSD TVPL +R V+P  P+    +Y  S +
Sbjct: 447 SSDATVPLYRRCVHPRIPQMAIIVYAESAA 476


>11_01_0072 +
           570345-570476,570640-570831,571095-571260,571487-571872
          Length = 291

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 338 LVLDLHVIMTTLAITISNKSAPRMAMDIATSSCNGRVL 225
           L+   H++   L+    +KS P     I T+ C+G VL
Sbjct: 14  LLFAAHLVSAQLSANFYDKSCPNALSTIRTAGCDGSVL 51


>02_01_0475 + 3422629-3422695,3422960-3423216
          Length = 107

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +2

Query: 92  KTDSKSENTKKSEQQATEKVKIDIKLLDLYENSEPDVYVRTSTEEEHGHYSYLWQYPLP 268
           K   K +  KK +++  +K K   KL     N    + +  +++   G Y  LW +PLP
Sbjct: 49  KKKKKKKKKKKKKKKKKKKKKKKNKLSSAVTNLGAGITLVAASDR--GGYGSLWTHPLP 105


>04_03_0647 + 18367321-18367675,18368044-18368885
          Length = 398

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 80  ELINKTDSKSENTKKSEQQATEKVKIDIKLLDLYENSEPD 199
           EL  + D K E  KK E +  E    D+  +DL  + +PD
Sbjct: 353 ELKQEMDQKLEQIKKVEDEKLEVSFSDLDTMDLGGHGQPD 392


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,665,683
Number of Sequences: 37544
Number of extensions: 146568
Number of successful extensions: 411
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)