Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30559X
(382 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 101 5e-21
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 100 2e-20
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 96 2e-19
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 70 1e-11
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 64 6e-10
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 64 8e-10
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 64 8e-10
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 64 1e-09
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 62 5e-09
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 62 5e-09
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 60 2e-08
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 59 2e-08
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 6e-08
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 58 7e-08
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 56 2e-07
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 56 2e-07
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 56 2e-07
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 56 3e-07
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 55 5e-07
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 54 7e-07
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 54 7e-07
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 54 9e-07
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 54 9e-07
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 54 9e-07
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 54 9e-07
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 54 1e-06
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 54 1e-06
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 54 1e-06
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 53 2e-06
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 53 2e-06
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 53 2e-06
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 52 3e-06
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 52 3e-06
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 52 3e-06
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 52 3e-06
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 3e-06
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 52 4e-06
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 52 4e-06
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 52 4e-06
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 4e-06
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 52 4e-06
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 52 4e-06
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 52 5e-06
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 52 5e-06
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 52 5e-06
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 52 5e-06
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 51 6e-06
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 51 6e-06
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 51 6e-06
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 51 8e-06
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 51 8e-06
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 51 8e-06
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 51 8e-06
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 1e-05
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 50 1e-05
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 50 1e-05
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 50 1e-05
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 50 1e-05
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 50 2e-05
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 50 2e-05
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 49 3e-05
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 49 3e-05
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 49 3e-05
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 49 3e-05
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 49 3e-05
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 49 3e-05
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 49 3e-05
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 49 3e-05
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 49 3e-05
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 49 3e-05
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 48 4e-05
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 48 4e-05
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 48 4e-05
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 48 4e-05
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 48 6e-05
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 48 6e-05
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 48 6e-05
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 48 6e-05
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 48 6e-05
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 48 8e-05
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 48 8e-05
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 47 1e-04
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 47 1e-04
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 47 1e-04
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 47 1e-04
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 46 2e-04
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 46 2e-04
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 2e-04
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 46 2e-04
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 46 2e-04
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 46 2e-04
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 46 2e-04
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 46 2e-04
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 46 2e-04
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 46 2e-04
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 46 2e-04
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 46 2e-04
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 46 2e-04
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 46 2e-04
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 46 2e-04
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 46 2e-04
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 46 2e-04
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 46 2e-04
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 46 3e-04
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 46 3e-04
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 46 3e-04
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 46 3e-04
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 45 4e-04
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 45 4e-04
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 45 4e-04
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 45 4e-04
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 45 4e-04
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 45 4e-04
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 45 4e-04
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 45 4e-04
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 45 6e-04
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 45 6e-04
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 45 6e-04
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 45 6e-04
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 45 6e-04
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 45 6e-04
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 44 7e-04
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 44 7e-04
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 44 7e-04
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 44 7e-04
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 44 0.001
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 44 0.001
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 44 0.001
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 44 0.001
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 44 0.001
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 44 0.001
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 44 0.001
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 44 0.001
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 44 0.001
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 44 0.001
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 44 0.001
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 44 0.001
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 44 0.001
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 44 0.001
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 44 0.001
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 44 0.001
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 44 0.001
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 43 0.002
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 43 0.002
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 43 0.002
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 43 0.002
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 43 0.002
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 43 0.002
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 43 0.002
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 43 0.002
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 43 0.002
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 43 0.002
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 43 0.002
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 43 0.002
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 43 0.002
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 43 0.002
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 43 0.002
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.002
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 43 0.002
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 43 0.002
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 42 0.003
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 42 0.003
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 42 0.003
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.003
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.003
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 42 0.003
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 42 0.004
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 42 0.004
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 42 0.004
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 42 0.004
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 42 0.004
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 42 0.004
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.004
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.004
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.004
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 42 0.004
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 42 0.004
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 42 0.004
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 42 0.005
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 42 0.005
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 42 0.005
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 42 0.005
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 42 0.005
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 42 0.005
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 41 0.007
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 41 0.007
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 41 0.007
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 41 0.007
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 41 0.007
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 41 0.007
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 41 0.007
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 41 0.007
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 41 0.007
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 41 0.007
UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1; ... 41 0.007
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 41 0.007
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 41 0.007
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 41 0.009
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 41 0.009
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 41 0.009
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.009
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 41 0.009
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.009
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 41 0.009
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 41 0.009
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 41 0.009
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 41 0.009
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 41 0.009
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 40 0.012
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 40 0.012
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 40 0.012
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 40 0.012
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 40 0.012
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 40 0.012
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 40 0.012
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 40 0.012
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 40 0.012
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 40 0.012
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 40 0.012
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 40 0.012
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 40 0.012
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 40 0.012
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 40 0.012
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 40 0.016
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 40 0.016
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 40 0.016
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 40 0.016
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 40 0.016
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 40 0.016
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 40 0.016
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.016
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 40 0.016
UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 40 0.016
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 40 0.016
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 40 0.021
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 40 0.021
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 40 0.021
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.021
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.021
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 40 0.021
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.021
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.021
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 40 0.021
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 40 0.021
UniRef50_Q5KLJ5 Cluster: Translation initiation factor, putative... 40 0.021
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 39 0.028
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 39 0.028
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 39 0.028
UniRef50_Q23U17 Cluster: Putative uncharacterized protein; n=1; ... 39 0.028
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 39 0.028
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 39 0.028
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 39 0.028
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 39 0.028
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 39 0.028
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 39 0.028
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 39 0.028
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 39 0.028
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 39 0.028
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 39 0.028
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 39 0.036
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 39 0.036
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 39 0.036
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 39 0.036
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 39 0.036
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 39 0.036
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 39 0.036
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 39 0.036
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 39 0.036
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 39 0.036
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 39 0.036
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 39 0.036
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 39 0.036
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 39 0.036
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 39 0.036
UniRef50_Q93Y39 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 39 0.036
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 39 0.036
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 39 0.036
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 39 0.036
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 38 0.048
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 38 0.048
UniRef50_A6EJM8 Cluster: Possible ATP-dependent RNA helicase; n=... 38 0.048
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 38 0.048
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 38 0.048
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 38 0.048
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.048
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.048
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 38 0.048
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 38 0.048
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 38 0.048
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 38 0.064
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 38 0.064
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 38 0.064
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 38 0.064
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.064
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 38 0.064
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 38 0.064
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 38 0.064
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 38 0.064
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 38 0.064
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 38 0.064
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 38 0.084
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 38 0.084
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 38 0.084
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.084
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.084
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 38 0.084
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 38 0.084
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 38 0.084
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 38 0.084
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 38 0.084
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 38 0.084
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 38 0.084
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 38 0.084
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 37 0.11
UniRef50_Q9J894 Cluster: ORF41 alkaline exonuclease; n=3; Nucleo... 37 0.11
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 37 0.11
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 37 0.11
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 37 0.11
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 37 0.11
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 37 0.11
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 37 0.11
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.11
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 37 0.11
UniRef50_A7ECJ8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.11
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 37 0.11
UniRef50_P52271 Cluster: Probable ATP-dependent RNA helicase MG3... 37 0.11
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 37 0.11
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 37 0.11
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 37 0.15
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 37 0.15
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 37 0.15
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 37 0.15
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 37 0.15
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 37 0.15
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 37 0.15
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 37 0.15
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 37 0.15
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 37 0.15
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 37 0.15
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 37 0.15
UniRef50_UPI0000EBE106 Cluster: PREDICTED: similar to RNA helica... 36 0.19
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 36 0.19
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 36 0.19
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 36 0.19
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 36 0.19
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 36 0.19
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 36 0.19
UniRef50_Q385S0 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 36 0.19
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 36 0.19
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 36 0.19
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 36 0.19
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 36 0.19
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 36 0.19
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 36 0.19
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 36 0.19
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 36 0.19
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 36 0.19
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 36 0.26
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 36 0.26
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 36 0.26
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 36 0.26
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 36 0.26
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 36 0.26
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 36 0.26
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 36 0.26
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 36 0.26
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 36 0.26
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 36 0.26
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 36 0.26
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 36 0.26
UniRef50_Q4Q0X4 Cluster: ATP-dependent RNA helicase-like protein... 36 0.26
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 36 0.26
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 36 0.26
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 36 0.26
UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11; ... 36 0.26
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 36 0.26
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 36 0.26
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 36 0.26
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 36 0.34
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 36 0.34
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 36 0.34
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 36 0.34
UniRef50_A7AN17 Cluster: DEAD/DEAH box helicase domain containin... 36 0.34
UniRef50_A2E773 Cluster: Helicase conserved C-terminal domain co... 36 0.34
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 36 0.34
UniRef50_UPI00006CA407 Cluster: SNF2 family N-terminal domain co... 35 0.45
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 35 0.45
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 35 0.45
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 35 0.45
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 35 0.45
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 35 0.45
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 35 0.45
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 35 0.45
UniRef50_Q5BRH8 Cluster: SJCHGC08229 protein; n=1; Schistosoma j... 35 0.45
UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 35 0.45
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 35 0.45
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 35 0.45
UniRef50_A2R3A8 Cluster: Contig An14c0130, complete genome; n=1;... 35 0.45
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 35 0.45
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 35 0.45
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 35 0.45
UniRef50_Q4P0Y5 Cluster: ATP-dependent RNA helicase DBP7; n=1; U... 35 0.45
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 35 0.45
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 35 0.45
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 35 0.45
UniRef50_UPI0000D574D5 Cluster: PREDICTED: similar to Probable A... 35 0.59
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 35 0.59
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 35 0.59
UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1; ... 35 0.59
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 35 0.59
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 35 0.59
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 35 0.59
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 35 0.59
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 35 0.59
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 35 0.59
UniRef50_P15424 Cluster: ATP-dependent RNA helicase MSS116, mito... 35 0.59
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 35 0.59
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 35 0.59
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 35 0.59
UniRef50_Q6CDN5 Cluster: ATP-dependent RNA helicase DBP6; n=1; Y... 35 0.59
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 34 0.78
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 34 0.78
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 34 0.78
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 34 0.78
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 34 0.78
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 34 0.78
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 34 0.78
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 34 0.78
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 34 0.78
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 34 0.78
UniRef50_Q00GM9 Cluster: Plastid RNA helicase VDL protein; n=1; ... 34 0.78
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 34 0.78
UniRef50_Q389Z8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 34 0.78
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 34 0.78
UniRef50_Q7S9U1 Cluster: Putative uncharacterized protein NCU063... 34 0.78
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 34 0.78
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 34 0.78
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 34 0.78
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 34 0.78
UniRef50_UPI0000E4A27C Cluster: PREDICTED: similar to ATP-depend... 34 1.0
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 34 1.0
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 34 1.0
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 34 1.0
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 34 1.0
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 34 1.0
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 34 1.0
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 34 1.0
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 34 1.0
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 34 1.0
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 34 1.0
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 34 1.0
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 34 1.0
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 34 1.0
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 34 1.0
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 34 1.0
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 34 1.0
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 34 1.0
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 34 1.0
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 34 1.0
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 34 1.0
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 34 1.0
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 34 1.0
UniRef50_A2EF23 Cluster: Putative uncharacterized protein; n=1; ... 34 1.0
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 34 1.0
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 34 1.0
UniRef50_Q97B15 Cluster: Putative uncharacterized protein TVG064... 34 1.0
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 34 1.0
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 34 1.0
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 34 1.0
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 34 1.0
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 34 1.0
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 34 1.0
UniRef50_Q5K7L2 Cluster: ATP-dependent RNA helicase DBP9; n=1; F... 34 1.0
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 34 1.0
UniRef50_Q9H694 Cluster: Protein bicaudal C homolog 1; n=31; Eum... 34 1.0
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 33 1.4
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 33 1.4
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 33 1.4
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 33 1.4
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 33 1.4
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 33 1.4
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 33 1.4
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 33 1.4
UniRef50_Q9NBW6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.4
UniRef50_Q7R850 Cluster: ATP-dependent RNA helicase; n=1; Plasmo... 33 1.4
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 33 1.4
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 33 1.4
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 33 1.4
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 33 1.4
UniRef50_A5K8S1 Cluster: DEAD/DEAH box helicase, putative; n=1; ... 33 1.4
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 33 1.4
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 33 1.4
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 33 1.4
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 33 1.4
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 33 1.4
UniRef50_Q750Q4 Cluster: ATP-dependent RNA helicase MSS116, mito... 33 1.4
UniRef50_Q3KSV2 Cluster: Epstein-Barr nuclear antigen 2; n=4; Hu... 33 1.4
UniRef50_P12978 Cluster: Epstein-Barr nuclear antigen 2; n=2; Hu... 33 1.4
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 33 1.4
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 33 1.4
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 101 bits (242), Expect = 5e-21
Identities = 44/57 (77%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Frame = +1
Query: 91 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+PCIK
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIK 66
Score = 72.1 bits (169), Expect = 3e-12
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G DVIAQAQSGTGKTATF ISILQ+IDTS++E QALILAPT
Sbjct: 66 KGHDVIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPT 107
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 99.5 bits (237), Expect = 2e-20
Identities = 45/68 (66%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
Frame = +1
Query: 61 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 234
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 235 RAIMPCIK 258
RAI+PCIK
Sbjct: 62 RAIIPCIK 69
Score = 66.5 bits (155), Expect = 2e-10
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPT
Sbjct: 69 KGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPT 110
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 96.3 bits (229), Expect = 2e-19
Identities = 44/64 (68%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = +1
Query: 70 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 246
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 247 PCIK 258
PCIK
Sbjct: 68 PCIK 71
Score = 65.3 bits (152), Expect = 4e-10
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPT
Sbjct: 71 KGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPT 112
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 70.1 bits (164), Expect = 1e-11
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+GRDVIAQ+QSGTGKTATFSIS+LQ +D +RE QALILAPT
Sbjct: 74 KGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPT 115
Score = 63.7 bits (148), Expect = 1e-09
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +1
Query: 142 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI IK
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIK 74
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 64.5 bits (150), Expect = 6e-10
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = +1
Query: 121 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 255
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P I
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPII 91
Score = 57.2 bits (132), Expect = 1e-07
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAP 377
G+DV+AQAQSGTGKT TF+I LQ+ID + R+ Q +ILAP
Sbjct: 93 GKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAP 132
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 64.1 bits (149), Expect = 8e-10
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +1
Query: 145 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+PCIK
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIK 57
Score = 56.0 bits (129), Expect = 2e-07
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G DVIAQ+QSGTGKTAT+ I+ LQ+ID + QA+ILAPT
Sbjct: 57 KGFDVIAQSQSGTGKTATYVIAALQRIDMMKEDTQAIILAPT 98
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 64.1 bits (149), Expect = 8e-10
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G+D IAQAQSGTGKTATFSI+ LQ IDTS QALILAPT
Sbjct: 70 KGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALILAPT 111
Score = 33.9 bits (74), Expect = 1.0
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 187 RGIYAYGFEKPSAIQQRAIMPCIK 258
+ + +YGFEKPS IQQ I+P IK
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIK 70
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 63.7 bits (148), Expect = 1e-09
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +1
Query: 142 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI IK
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIK 74
Score = 50.4 bits (115), Expect = 1e-05
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQID 338
+GRDVIAQ+QSGTGKTATFS+S+LQ +D
Sbjct: 74 KGRDVIAQSQSGTGKTATFSVSVLQCLD 101
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 61.7 bits (143), Expect = 5e-09
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = +1
Query: 127 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P I+
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQ 312
Score = 61.7 bits (143), Expect = 5e-09
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QG DVIAQAQSGTGKT+ F++++ Q +DTS RE QALI +PT
Sbjct: 312 QGHDVIAQAQSGTGKTSMFALTVYQMVDTSNREVQALISSPT 353
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 61.7 bits (143), Expect = 5e-09
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G DVI QAQSGTGKTATF ILQQ++ + +CQAL+LAPT
Sbjct: 48 KGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQALVLAPT 89
Score = 32.3 bits (70), Expect = 3.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 160 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
D N+ L + G EKPSAIQQ+ I+P K
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCK 48
>UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1,; n=2;
Theria|Rep: PREDICTED: similar to eukaryotic translation
initiation factor 4A, isoform 1, - Monodelphis domestica
Length = 59
Score = 59.7 bits (138), Expect = 2e-08
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +1
Query: 115 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
G +++DW+++V++FDDMNL E LL GIYAYGFEK CIK
Sbjct: 10 GVIESDWNEIVDSFDDMNLSESLLCGIYAYGFEKAICHSVTCNSSCIK 57
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 59.3 bits (137), Expect = 2e-08
Identities = 27/44 (61%), Positives = 34/44 (77%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L +GRDVI QAQ+GTGKTA F + +LQ+ID + R QAL+L PT
Sbjct: 39 LLEGRDVIGQAQTGTGKTAAFGLPLLQRIDAADRSVQALVLCPT 82
Score = 37.1 bits (82), Expect = 0.11
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 145 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
VE+F D+ L+EELL+ I GF +PS IQ AI
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAI 36
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 58.0 bits (134), Expect = 6e-08
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
AL +GRDV+ QAQ+GTGKTA F++ +L ++D RE Q L+LAPT
Sbjct: 42 ALLEGRDVLGQAQTGTGKTAAFALPLLSRLDLQRREPQVLVLAPT 86
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 57.6 bits (133), Expect = 7e-08
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
RD++ QAQ+GTGKTA F I IL+ ID S R QALILAPT
Sbjct: 41 RDIVGQAQTGTGKTAAFGIPILETIDESSRNTQALILAPT 80
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 56.4 bits (130), Expect = 2e-07
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
R VIAQAQSGTGKT FSI +L +ID S + QAL+LAPT
Sbjct: 131 RHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPT 170
Score = 46.4 bits (105), Expect = 2e-04
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 85 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAI 122
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 56.0 bits (129), Expect = 2e-07
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G+D+I QAQ+GTGKTA F+I IL +D SI Q L++APT
Sbjct: 37 EGKDIIGQAQTGTGKTAAFAIPILSNLDCSINRIQHLVIAPT 78
Score = 35.5 bits (78), Expect = 0.34
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 249
F MN+K E+L+ + GFEKP+ IQ+ A++P
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQE-AVLP 33
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 56.0 bits (129), Expect = 2e-07
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QGRD IA AQ+GTGKTA F++ ILQ + I QALILAPT
Sbjct: 42 QGRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPT 83
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 55.6 bits (128), Expect = 3e-07
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L +GRDV+ AQ+GTGKTA F++ IL ID +R QAL+L PT
Sbjct: 43 LLEGRDVVGLAQTGTGKTAAFALPILANIDVKVRSPQALVLCPT 86
>UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic
initiation factor 4AI; n=1; Pan troglodytes|Rep:
PREDICTED: similar to eukaryotic initiation factor 4AI -
Pan troglodytes
Length = 151
Score = 54.8 bits (126), Expect = 5e-07
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +3
Query: 252 HQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQAL 365
++G DVIAQAQSGTGK ATF+ISILQQI+ ++ QAL
Sbjct: 26 NEGYDVIAQAQSGTGKMATFAISILQQIELDLKATQAL 63
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 54.4 bits (125), Expect = 7e-07
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G+DV+ +AQ+GTGKTA F + L +IDTSI++ Q ++LAPT
Sbjct: 52 GKDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPT 92
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 54.4 bits (125), Expect = 7e-07
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
A+ G+DV QA++G+GKTA F + +LQQID S+ + QAL+L PT
Sbjct: 36 AILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPT 80
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 54.0 bits (124), Expect = 9e-07
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L GRDV+ Q+Q+GTGKTA FS+ IL+++D + QA++L PT
Sbjct: 37 LLSGRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQAIVLTPT 80
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 54.0 bits (124), Expect = 9e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
AL QG+DVI QAQ+GTGKTA F + I++++ R QAL+L PT
Sbjct: 39 ALLQGKDVIGQAQTGTGKTAAFGVPIVERLVPGQRAVQALVLTPT 83
Score = 33.5 bits (73), Expect = 1.4
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
TF D+ L E++L+ + GFE+PS IQ +AI
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAI 37
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 54.0 bits (124), Expect = 9e-07
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
AL +G+DV+ +AQ+GTGKTA F + L +ID S+++ Q L++ PT
Sbjct: 41 ALLEGQDVLGEAQTGTGKTAAFGLPALAKIDASVKQTQVLVVTPT 85
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 54.0 bits (124), Expect = 9e-07
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L Q D+I QAQ+GTGKTA F + I+Q+I+ +++ QALIL PT
Sbjct: 37 LSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCPT 80
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 53.6 bits (123), Expect = 1e-06
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D+I QAQ+GTGKTA F++ +L +ID + RE Q LILAPT
Sbjct: 60 GHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQLLILAPT 100
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 53.6 bits (123), Expect = 1e-06
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QG+D+I QAQ+GTGKTA F + +L ++DT Q +++APT
Sbjct: 38 QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPT 79
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 53.6 bits (123), Expect = 1e-06
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD++A+A++GTGKTA+F I L +I+TS+ QALIL PT
Sbjct: 73 GRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPT 113
Score = 45.2 bits (102), Expect = 4e-04
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +1
Query: 79 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAI 67
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 52.8 bits (121), Expect = 2e-06
Identities = 21/42 (50%), Positives = 34/42 (80%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+GRD+I Q+Q+GTGKT +F + I+Q ++ ++E QA+I+APT
Sbjct: 38 KGRDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPT 79
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 52.8 bits (121), Expect = 2e-06
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +1
Query: 163 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
M LKE LLRGIYAYG EKPSAIQQ+ I+P K
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCK 32
Score = 42.3 bits (95), Expect = 0.003
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI 335
+G DVI QAQSGTGKTATF ILQQ+
Sbjct: 32 KGLDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 52.8 bits (121), Expect = 2e-06
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L GRDV+ AQ+G+GKTA FS+ +LQ +D ++ Q L+LAPT
Sbjct: 40 LLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPT 83
Score = 31.5 bits (68), Expect = 5.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
TF D+ LK +L + G+EKPS IQ I
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECI 37
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 52.4 bits (120), Expect = 3e-06
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L + DV+A AQ+GTGKTA F + +LQQID R Q+LIL PT
Sbjct: 37 LGENNDVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCPT 80
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 52.4 bits (120), Expect = 3e-06
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G DVIAQA +G+GKTA F + +LQ++D ++ QAL+L PT
Sbjct: 62 RGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPT 103
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 52.4 bits (120), Expect = 3e-06
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L G+D+ QAQ+GTGKTA F I ++ +D SI + Q+LIL PT
Sbjct: 35 LMTGKDLTGQAQTGTGKTAAFGIPAIEHVDISINQTQSLILCPT 78
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 52.4 bits (120), Expect = 3e-06
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+ +D+I Q+Q+G+GKT + + I Q+ID+S RE QALILAPT
Sbjct: 39 KNKDIIGQSQTGSGKTLAYLLPIFQKIDSSKRETQALILAPT 80
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 52.4 bits (120), Expect = 3e-06
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L + RD++A AQ+GTGKTA F +LQ ID S + Q LI+APT
Sbjct: 36 LAEDRDMVALAQTGTGKTAAFGFPLLQNIDASSKTTQGLIIAPT 79
Score = 33.9 bits (74), Expect = 1.0
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
TFD + L LL+ I GFE PS IQ+ AI
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAI 32
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 52.0 bits (119), Expect = 4e-06
Identities = 24/43 (55%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDT--SIRECQALILAPT 380
G+DVI QA++GTGKTA FSI IL+Q+D+ R+ QA+++ PT
Sbjct: 81 GKDVIGQARTGTGKTAAFSIPILEQLDSLEDCRDPQAIVIVPT 123
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 52.0 bits (119), Expect = 4e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G DVI QAQ+GTGKT F I I+++I+ I++ Q+LIL PT
Sbjct: 39 KGHDVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPT 80
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 52.0 bits (119), Expect = 4e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
Q +D++ +Q+GTGKT + + I ++IDTS RE QALILAPT
Sbjct: 38 QNKDLLINSQTGTGKTLAYLLPIFEKIDTSKRETQALILAPT 79
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 52.0 bits (119), Expect = 4e-06
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L G DV+ AQ+GTGKTA FS+ +L +IDT+ + QAL+L PT
Sbjct: 39 LLDGNDVLGLAQTGTGKTAAFSLPLLSRIDTTKNKPQALVLCPT 82
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 52.0 bits (119), Expect = 4e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G DVIAQA+SGTGKT TF + L+++D R QAL LAPT
Sbjct: 74 GCDVIAQAKSGTGKTMTFVVIALERVDAGRRRTQALALAPT 114
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 52.0 bits (119), Expect = 4e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G+DV QAQ+GTGKTA F I I++++D + QAL+L+PT
Sbjct: 42 GKDVTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVLSPT 82
Score = 32.3 bits (70), Expect = 3.2
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1
Query: 148 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKD 261
+TF + + EELL+ I GFE+P+ IQ AI P I D
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAI-PQILD 41
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 51.6 bits (118), Expect = 5e-06
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+ +DVI Q+ +G+GKT + + I Q+IDTS RE QA+ILAPT
Sbjct: 39 ENKDVIGQSPTGSGKTLAYLLPIFQKIDTSKREMQAIILAPT 80
Score = 31.1 bits (67), Expect = 7.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 142 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
++E+FD + L + L+ G+ G KP+ IQ + I
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTI 34
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 51.6 bits (118), Expect = 5e-06
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L RDV+ QAQ+GTGKTA+F++ IL +ID QAL+LAPT
Sbjct: 41 LLNNRDVLGQAQTGTGKTASFALPILARIDIKQTTPQALVLAPT 84
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 51.6 bits (118), Expect = 5e-06
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+++IAQ+QSGTGKTATF +++L +I T + CQ L +APT
Sbjct: 116 QNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMAPT 155
Score = 50.0 bits (114), Expect = 1e-05
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1
Query: 145 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKD 261
V TF ++NLKE LL+GI A GF KPS IQ+RA+ I D
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISD 113
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 51.6 bits (118), Expect = 5e-06
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +3
Query: 252 HQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+Q +++IAQ+QSGTGKTATF +++L +ID + CQ L +APT
Sbjct: 85 NQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPT 127
Score = 45.6 bits (103), Expect = 3e-04
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 145 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
V++F+D+ LK ELL GI + GF KPS+IQ+RA+
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERAL 79
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 51.2 bits (117), Expect = 6e-06
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D+I QAQ+GTGKTA F + +L ID S + QAL+LAPT
Sbjct: 92 GSDLIGQAQTGTGKTAAFGLPLLNNIDFSKKCVQALVLAPT 132
Score = 33.5 bits (73), Expect = 1.4
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
+F D NLK +L+ + GF +P+ IQ++AI
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAI 86
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 51.2 bits (117), Expect = 6e-06
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = +3
Query: 252 HQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
H G D I AQ+GTGKTA F + +L ID + RE QALILAPT
Sbjct: 50 HDG-DFIGLAQTGTGKTAAFGLPLLDLIDVNSREVQALILAPT 91
Score = 32.3 bits (70), Expect = 3.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 145 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
++ F+ + L + LL G+ GFE P+ IQQ++I +K
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLK 49
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 51.2 bits (117), Expect = 6e-06
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L +G+DV+ AQ+GTGKTA F++ +L + +RE Q L+LAPT
Sbjct: 40 LLEGKDVLGLAQTGTGKTAAFTLPLLARTQNEVREPQVLVLAPT 83
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 50.8 bits (116), Expect = 8e-06
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
A+ G DVI QAQ+GTGKTA F I +++++ T R QALIL PT
Sbjct: 39 AILAGGDVIGQAQTGTGKTAAFGIPVVEKVSTG-RHVQALILTPT 82
Score = 32.3 bits (70), Expect = 3.2
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
F+++ + EE+ + I GFE+PS IQ +AI
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAI 37
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 50.8 bits (116), Expect = 8e-06
Identities = 20/41 (48%), Positives = 33/41 (80%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD++ QAQ+GTGKTA F++ +L+++++ + Q L+LAPT
Sbjct: 108 GRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPT 148
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 50.8 bits (116), Expect = 8e-06
Identities = 21/44 (47%), Positives = 33/44 (75%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L+ ++V+ AQ+GTGKTA F + +LQQI+ S+++ Q L+L PT
Sbjct: 36 LNSTKNVVGVAQTGTGKTAAFGLPVLQQINPSLQQTQVLVLVPT 79
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 50.8 bits (116), Expect = 8e-06
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L + D++A AQ+GTGKTA F ++Q+ID + R QALIL+PT
Sbjct: 37 LEKDIDLVALAQTGTGKTAAFGFPVIQKIDANNRNTQALILSPT 80
Score = 34.3 bits (75), Expect = 0.78
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
F+ + L E LLR I GFE P+ +Q++AI
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAI 33
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 50.4 bits (115), Expect = 1e-05
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G+D+I QA++GTGKT F + IL++ID + QALI+APT
Sbjct: 42 GKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPT 82
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 50.4 bits (115), Expect = 1e-05
Identities = 19/41 (46%), Positives = 32/41 (78%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D++ +AQ+GTGKTA F++ +L ++D +++ Q L+LAPT
Sbjct: 81 GHDLLGEAQTGTGKTAAFALPLLDRLDLAVKNPQVLVLAPT 121
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 50.4 bits (115), Expect = 1e-05
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
Q +DVI QAQ+GTGKTA F I I+++++ QAL++APT
Sbjct: 38 QNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPT 79
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 50.4 bits (115), Expect = 1e-05
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
AL G DV+ AQ+GTGKTA F+I +L +ID + + QAL+L PT
Sbjct: 46 ALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPT 90
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 50.0 bits (114), Expect = 1e-05
Identities = 23/42 (54%), Positives = 34/42 (80%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QG+D+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+ PT
Sbjct: 81 QGKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPT 121
Score = 31.1 bits (67), Expect = 7.3
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 79 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
Q S + P L + Q + FD LK+ +L+GI GF PS +Q ++I
Sbjct: 22 QQSEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSI 76
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 49.6 bits (113), Expect = 2e-05
Identities = 21/44 (47%), Positives = 34/44 (77%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L +GRD + +AQ+GTGKTA FS+ +L +++ S + QA+++APT
Sbjct: 60 LLEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPT 103
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 49.6 bits (113), Expect = 2e-05
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +1
Query: 124 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 255
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P I
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPII 73
Score = 46.4 bits (105), Expect = 2e-04
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD+ AQAQSGTGKT F+++ LQ D S Q L+LA T
Sbjct: 75 GRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQILVLAST 115
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 49.2 bits (112), Expect = 3e-05
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L++ D++ AQ+GTGKTA F I ++Q DT ++ QAL+L PT
Sbjct: 37 LNRQTDLVGLAQTGTGKTAAFGIPLIQLTDTRLKRTQALVLCPT 80
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 49.2 bits (112), Expect = 3e-05
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
AL G ++ AQ+GTGKTA F++ +L +ID ++ E Q L+LAPT
Sbjct: 57 ALLAGNHLLGVAQTGTGKTAAFALPLLSRIDANVAEPQILVLAPT 101
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 49.2 bits (112), Expect = 3e-05
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+DV QAQ+GTGKTA F I +L+ ID+ QA+IL PT
Sbjct: 42 KDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCPT 81
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 49.2 bits (112), Expect = 3e-05
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L G DV+ AQ+G+GKTA F++ +L QID S + Q L++APT
Sbjct: 39 LLNGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPT 82
Score = 33.9 bits (74), Expect = 1.0
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
TF+D+ L E +L+ + GFE PS IQQ I
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCI 36
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 48.8 bits (111), Expect = 3e-05
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
RDV+ AQ+GTGKTA F + +L +D R QAL+LAPT
Sbjct: 83 RDVVGIAQTGTGKTAAFGLPLLAIVDADERNVQALVLAPT 122
Score = 31.1 bits (67), Expect = 7.3
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 124 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
+ D D V TF + L EE+L + GF P+ IQ AI P ++
Sbjct: 39 EEDTDTV--TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLE 81
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 48.8 bits (111), Expect = 3e-05
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L +D+I QAQ+GTGKTA F + +L +I+ +I Q LILAPT
Sbjct: 46 LLNNKDIIGQAQTGTGKTAAFVLPLLDKINLNINAPQLLILAPT 89
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 48.8 bits (111), Expect = 3e-05
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QGRD+IA A++G+GKTA F + ILQ++ + ALILAPT
Sbjct: 87 QGRDIIALAETGSGKTAAFGLPILQRLLQRTQRFYALILAPT 128
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 48.8 bits (111), Expect = 3e-05
Identities = 24/70 (34%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Frame = +1
Query: 142 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--KDAML-SLKPSQELEKLLLS 312
+ TF+ M L++ELLRGI A+GF +P +QQRA++P I +D ++ + + + + + LS
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 313 LYRFYNKSIQ 342
+ ++ S++
Sbjct: 80 VLSIFDLSVK 89
Score = 43.2 bits (97), Expect = 0.002
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L QGRDV+ Q TGKT S+S+L D S+++ Q LIL T
Sbjct: 56 LIQGRDVVIQNFRSTGKTTVMSLSVLSIFDLSVKKIQVLILQKT 99
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 48.8 bits (111), Expect = 3e-05
Identities = 20/41 (48%), Positives = 31/41 (75%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD++A+A++GTGKTA F I L+++ + + QALI+ PT
Sbjct: 83 GRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPT 123
Score = 44.0 bits (99), Expect = 0.001
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
TF+D LK ELL GI+ GFEKPS IQ+ AI
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAI 77
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 48.8 bits (111), Expect = 3e-05
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +1
Query: 145 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
V+TF+++ LKEELL+GIYA GF +PS IQ+ A+
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMAL 128
Score = 41.9 bits (94), Expect = 0.004
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +3
Query: 252 HQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
H +++IAQ+QSGTGKTA F +++L +++ Q L LAPT
Sbjct: 134 HPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPT 176
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 48.4 bits (110), Expect = 4e-05
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D+I +A+SGTGKTA F I L+ ID I Q +ILAPT
Sbjct: 61 GFDLIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPT 101
Score = 34.3 bits (75), Expect = 0.78
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
TF M L +++L G+ GF KPS IQ ++I
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI 55
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G+D+I AQ+GTGKTA F+I ++ ++ + QALIL PT
Sbjct: 45 KGKDIIGHAQTGTGKTAAFAIPTIELLEVESKHLQALILCPT 86
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+VI QAQ+GTGKTA F I +++++D + QAL+L PT
Sbjct: 42 NVIGQAQTGTGKTAAFGIPLIERLDEKANDVQALVLTPT 80
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 48.4 bits (110), Expect = 4e-05
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QG+D++ A++G+GKTA F+I ILQ + T+ + AL+LAPT
Sbjct: 134 QGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPT 175
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 48.0 bits (109), Expect = 6e-05
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
D I A +GTGKTA F I +++ ID+++++ QAL+L+PT
Sbjct: 84 DFIGLASTGTGKTAAFGIPLIENIDSTVKDTQALVLSPT 122
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 48.0 bits (109), Expect = 6e-05
Identities = 20/42 (47%), Positives = 33/42 (78%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G++VI +A++GTGKT + + I+++ID S E QA+IL+PT
Sbjct: 38 KGKNVIGKAETGTGKTLAYLLPIIEKIDDSKNEMQAIILSPT 79
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 48.0 bits (109), Expect = 6e-05
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPT 380
GRDV+ QAQ+GTGKTA F++ ++ +D + R+ Q L+LAPT
Sbjct: 44 GRDVLGQAQTGTGKTAAFALPLINNMDLASRDRAPQVLVLAPT 86
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 48.0 bits (109), Expect = 6e-05
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L+ D++A A++GTGKTA F + +LQ ID + QA+ILAPT
Sbjct: 38 LNDKEDIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPT 81
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 48.0 bits (109), Expect = 6e-05
Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPT 380
+GRDV+ QA++GTGKTA F I I+++++ + R QALIL PT
Sbjct: 40 EGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQALILTPT 83
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 47.6 bits (108), Expect = 8e-05
Identities = 23/46 (50%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPT 380
A+ QGRDV+ AQ+GTGKTA +++ +LQQ+ + + +ALIL+PT
Sbjct: 46 AILQGRDVVGLAQTGTGKTAAYALPLLQQLTEGPPGQLRALILSPT 91
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 47.6 bits (108), Expect = 8e-05
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+DVI QAQ+GTGKTA F I ++++I+ QA+++APT
Sbjct: 41 KDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPT 80
Score = 31.1 bits (67), Expect = 7.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
TF D NL +L++ I GFE+ + IQ + I
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTI 34
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 47.2 bits (107), Expect = 1e-04
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
AL GRDV+ QAQ+GTGKTA F++ +L + + + Q L+LAPT
Sbjct: 48 ALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQVLVLAPT 92
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G+D+I QA++G+GKTA FS+ IL +I+ QALIL PT
Sbjct: 84 GKDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQALILCPT 124
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 46.8 bits (106), Expect = 1e-04
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPT 380
AL +D+IAQAQ+GTGKTA F I +L++ID + +A+I+ PT
Sbjct: 52 ALSTDKDLIAQAQTGTGKTAAFGIPLLERIDFKANKFVKAIIVTPT 97
Score = 33.5 bits (73), Expect = 1.4
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 148 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 249
E F+D L EE+L I G+EKP+ I Q+ ++P
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEI-QKIVLP 50
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G DV+A A++G+GKTA F I ILQ + T ++ ALI+ PT
Sbjct: 37 EGNDVVACAKTGSGKTAAFLIPILQSLMTELKPLYALIITPT 78
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 46.4 bits (105), Expect = 2e-04
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3
Query: 243 NALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
NA+H G+DV+ QA++GTGKTA F +S+L Q+ + L+L T
Sbjct: 71 NAIH-GKDVLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHT 115
Score = 37.9 bits (84), Expect = 0.064
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--KDAMLSLK 279
+F+D +LK++LLR + GFE+PS +Q + I I KD + K
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAK 83
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 46.4 bits (105), Expect = 2e-04
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G+D+I ++++GTGKTA F + +L++I R +ALIL PT
Sbjct: 65 EGKDLIVRSKTGTGKTAAFGLPLLEKIPADERRVRALILCPT 106
Score = 33.9 bits (74), Expect = 1.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
FDDMNL E + + G+ P+ +Q RA P I+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIE 65
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 46.4 bits (105), Expect = 2e-04
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QG DVI QA++G+GKTA F + IL++ S + QAL+LAPT
Sbjct: 41 QGTDVIGQARTGSGKTAAFGLPILERCQPS-GKLQALVLAPT 81
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 46.4 bits (105), Expect = 2e-04
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
RDV+AQAQ+GTGKT F + IL++++ QALI+ PT
Sbjct: 41 RDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALIITPT 80
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 46.4 bits (105), Expect = 2e-04
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
A+ G+D+IAQA++GTGKTA F + +L ++ Q LIL PT
Sbjct: 37 AILDGKDLIAQAKTGTGKTAAFGLGVLSKLVLDDYRIQVLILCPT 81
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D+I +A+SGTGKT F I L+ ID I Q LILAPT
Sbjct: 33 GFDLIMRAKSGTGKTLVFCIISLEMIDIDISSVQVLILAPT 73
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 46.0 bits (104), Expect = 2e-04
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+D+I QA+SGTGKT FS+ L+ ID + Q LILAPT
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPT 43
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 46.0 bits (104), Expect = 2e-04
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 6/50 (12%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPT 380
L QGRDV+A AQ+GTGKTA + + ++Q + +T+ + +ALILAPT
Sbjct: 37 LLQGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPT 86
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/42 (42%), Positives = 33/42 (78%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G+++ ++ +GTGKTA+F + IL++I+ + R QA+I+APT
Sbjct: 37 EGKNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPT 78
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/40 (45%), Positives = 30/40 (75%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+D+I ++ +GTGKT F + ILQ ++T +++ QA+IL PT
Sbjct: 39 QDIIGKSHTGTGKTVAFIVPILQNLNTHLKQPQAIILCPT 78
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+ G+DVI ++++GTGKTA F+I IL++I R AL++ PT
Sbjct: 54 VRDGKDVIVRSKTGTGKTAAFAIPILERIADGRRRPSALVMCPT 97
Score = 30.7 bits (66), Expect = 9.6
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 249
+FD++ L E + R I +G+E+P+ +Q P
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRP 53
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/42 (47%), Positives = 31/42 (73%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G+D+IA++ +GTGKT + I IL +ID + QA+ILAP+
Sbjct: 46 EGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPS 87
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QG+DVI QAQ+G+GKT F I L++I+ + QA++L PT
Sbjct: 40 QGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIMLCPT 81
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 46.0 bits (104), Expect = 2e-04
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +1
Query: 145 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAAL 101
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
++IAQ+QSGTGKTA F++ +L +D SI QA+ ++PT
Sbjct: 110 NLIAQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPT 148
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 46.0 bits (104), Expect = 2e-04
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G DV+ +AQ+GTGKTA F+I +L+ ++ R QALI+ PT
Sbjct: 41 GMDVVGEAQTGTGKTAAFAIPVLENLEAE-RVPQALIICPT 80
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRDV+ QA +GTGKT +SIS+LQ+I Q LI+APT
Sbjct: 39 GRDVVGQAHTGTGKTGAYSISMLQEIKEG-GGIQGLIVAPT 78
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G DVI QA+SG GKTA F +S LQQI+ S + AL+L T
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHT 123
Score = 33.1 bits (72), Expect = 1.8
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKDAMLSL 276
F D LK ELLR I GFE PS +Q CI A+L +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHE----CIPQAILGM 84
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 46.0 bits (104), Expect = 2e-04
Identities = 19/40 (47%), Positives = 32/40 (80%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
R++I Q+QSGTGKTA F++++L ++D +I QA+ +AP+
Sbjct: 188 RNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPS 227
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +1
Query: 145 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
V++F ++NL E+L++GI A GF+KPS IQ++A+
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKAL 179
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 45.6 bits (103), Expect = 3e-04
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD++A+A++GTGK+ + I +L++ID QAL+L PT
Sbjct: 126 GRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPT 166
Score = 38.3 bits (85), Expect = 0.048
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
F+D LK ELL GI+ G+EKPS IQ+ +I
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESI 120
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 45.6 bits (103), Expect = 3e-04
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
A+ GRDV AQ+GTGKTA F++ IL ++ R + L+L PT
Sbjct: 166 AVLAGRDVTGSAQTGTGKTAAFALPILHKLGAHERRLRCLVLEPT 210
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 45.6 bits (103), Expect = 3e-04
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
A+ + +D+I ++Q+G+GKTA F+I I Q +D + QAL+L PT
Sbjct: 37 AILEHKDIIVKSQTGSGKTAAFAIPICQLVDWDENKPQALVLVPT 81
Score = 31.9 bits (69), Expect = 4.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 142 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
+ F D L +ELL+ I FE P+ +QQ+ I
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVI 35
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 45.6 bits (103), Expect = 3e-04
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L QG+ + AQ+G+GKTA F IS+L ++ CQA+I++PT
Sbjct: 37 LIQGQSISVNAQTGSGKTAAFGISLLSLVNPQKSICQAVIISPT 80
Score = 33.5 bits (73), Expect = 1.4
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKDAMLSL 276
F+D+ +L++ IY YGFE PS +QQ +I I+ +S+
Sbjct: 6 FEDL-ASFDLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISV 45
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 45.2 bits (102), Expect = 4e-04
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTS--IRECQALILAPT 380
+G D+I QAQ+GTGKTA F +I+ D S + +ALILAPT
Sbjct: 40 EGHDIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALILAPT 83
Score = 37.9 bits (84), Expect = 0.064
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
FDD+ LKE LL+ I GFE+PS IQ +I
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESI 35
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 45.2 bits (102), Expect = 4e-04
Identities = 17/42 (40%), Positives = 32/42 (76%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G+DVIA++ +GTGKT + + +L +I+ +++ Q ++LAPT
Sbjct: 34 EGQDVIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPT 75
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 45.2 bits (102), Expect = 4e-04
Identities = 19/44 (43%), Positives = 33/44 (75%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+ + +D+IA +Q+G+GKTAT +I I +++T + + QALI+ PT
Sbjct: 49 IQKKQDLIALSQTGSGKTATCAIPICNRVNTELTDIQALIIVPT 92
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 45.2 bits (102), Expect = 4e-04
Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRE-CQALILAPT 380
L QG+D++ AQ+GTGKTA FSI ILQ++ T R+ +AL+L PT
Sbjct: 35 LLQGKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRKGIKALVLTPT 80
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 45.2 bits (102), Expect = 4e-04
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+DVIA+A +GTGKT F I +++ ID QAL+LAPT
Sbjct: 50 KDVIAKAPTGTGKTFAFGIPMVEHIDPESDAVQALVLAPT 89
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 45.2 bits (102), Expect = 4e-04
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
D I AQ+GTGKTA F + +L ID + QALIL+PT
Sbjct: 42 DFIGLAQTGTGKTAAFGLPVLHHIDANSDHIQALILSPT 80
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 45.2 bits (102), Expect = 4e-04
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L GRD++ Q+++G+GKT F + +L+++D + QAL+L PT
Sbjct: 71 LFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAEASTQALVLVPT 114
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 45.2 bits (102), Expect = 4e-04
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +1
Query: 142 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
V E F DM L +ELL+ IY GFEKPS IQ+ AI
Sbjct: 49 VAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAI 82
Score = 32.7 bits (71), Expect = 2.4
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPT 380
+G +V+ Q++SGTGKT ++ +L +T I E Q +++ PT
Sbjct: 87 RGHNVVVQSKSGTGKTIAYTCGVLG--NTKIGERTQVMVVTPT 127
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 44.8 bits (101), Expect = 6e-04
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPT 380
GRD+I +AQ+GTGKTA F I++LQ++ + E +ALILAPT
Sbjct: 135 GRDIIGKAQTGTGKTAAFLITVLQKLLTVKPEERFASEPRALILAPT 181
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 44.8 bits (101), Expect = 6e-04
Identities = 18/39 (46%), Positives = 31/39 (79%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
++I Q+Q+GTGK+ F + ++Q ID+ I+E QA+++APT
Sbjct: 43 NLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPT 81
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 44.8 bits (101), Expect = 6e-04
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAP 377
QG+D + +A++GTGKTA F+I LQ + ++ Q LIL P
Sbjct: 41 QGQDALVRAKTGTGKTAAFAIPALQHLRAEVQHPQVLILTP 81
Score = 33.9 bits (74), Expect = 1.0
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--KDAMLSLK 279
F D+ LK+ +L IY G++KP+ IQ +++ + +DA++ K
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAK 50
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 44.8 bits (101), Expect = 6e-04
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L+ ++IAQA +G+GKTATF++++L ++DT I Q + L PT
Sbjct: 147 LNSPMNLIAQAHNGSGKTATFALAMLGKVDTRIIHPQCMCLCPT 190
Score = 37.9 bits (84), Expect = 0.064
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKDAMLSL 276
+ D+NL +LL+GIY GF +PS I Q A +P I ++ ++L
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKI-QAAALPLILNSPMNL 153
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 44.8 bits (101), Expect = 6e-04
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+GRD+IA A++G+GKTA+F+I IL Q+ A+IL PT
Sbjct: 40 KGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPT 81
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 44.8 bits (101), Expect = 6e-04
Identities = 20/40 (50%), Positives = 31/40 (77%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
R++IAQ+QSGTGKTA FS+++L +++ QA+ LAP+
Sbjct: 132 RNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPS 171
Score = 43.6 bits (98), Expect = 0.001
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +1
Query: 148 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
++FD++ L ELL+GIYA F+KPS IQ+RA+
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERAL 123
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 44.4 bits (100), Expect = 7e-04
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 270 IAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
I+ + SGTG TATF+ISILQQID ++ +A LAPT
Sbjct: 182 ISCSPSGTGNTATFAISILQQIDLDLKATKASGLAPT 218
>UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein
precursor; n=1; Ralstonia metallidurans CH34|Rep:
DEAD/DEAH box helicase-like protein precursor -
Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM
2839)
Length = 227
Score = 44.4 bits (100), Expect = 7e-04
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD+I QA G+G+T F++++L +D + QAL+L PT
Sbjct: 53 GRDLIVQASPGSGRTVAFTVALLHHLDPRRFDVQALVLCPT 93
>UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 486
Score = 44.4 bits (100), Expect = 7e-04
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L GRD I AQ+G+GKT T+ + I ++T I QALI+ PT
Sbjct: 117 LLSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPT 160
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 44.4 bits (100), Expect = 7e-04
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPT 697
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 44.0 bits (99), Expect = 0.001
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPT 380
+G D+ A AQ+GTGKTA FS+ ++QQ+ S + +ALI APT
Sbjct: 37 RGHDIFATAQTGTGKTAAFSLPLIQQLLESGKSASRKTARALIFAPT 83
>UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG13685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13685 - Caenorhabditis
briggsae
Length = 935
Score = 44.0 bits (99), Expect = 0.001
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD++ QA+SGTGKT FS+ ++ +D Q +I+ PT
Sbjct: 51 GRDMLVQAKSGTGKTLVFSVLAVENLDLKAHYIQKVIITPT 91
>UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2;
Plasmodium chabaudi|Rep: DEAD-box RNA helicase, putative
- Plasmodium chabaudi
Length = 374
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/44 (43%), Positives = 32/44 (72%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L R++IAQ+Q+G+GKT TF I++L +I+ ++ QA+ + PT
Sbjct: 259 LDSNRNLIAQSQNGSGKTLTFVIAMLSKINRALYSLQAVCICPT 302
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/39 (43%), Positives = 32/39 (82%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
++IAQA++G+GKTATF++++L +++ ++ QAL + PT
Sbjct: 139 NIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCICPT 177
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 44.0 bits (99), Expect = 0.001
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PT
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPT 99
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 44.0 bits (99), Expect = 0.001
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G+D+I QA++GTGKTA F I +++ I + + Q L++ PT
Sbjct: 38 EGKDLIGQARTGTGKTAAFGIPMVEAIRPTSKGVQGLVVVPT 79
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 43.6 bits (98), Expect = 0.001
Identities = 16/41 (39%), Positives = 30/41 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD++A+A++GTGK+ + I +L+++D QA+++ PT
Sbjct: 118 GRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPT 158
Score = 31.9 bits (69), Expect = 4.2
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
F+D LK ELL GI+ G+E PS+IQ+ +I
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESI 112
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 43.6 bits (98), Expect = 0.001
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
A+ G DV A+A++G+GKTA F I +L +I S QAL+L PT
Sbjct: 37 AVLSGADVRAKAKTGSGKTAAFGIGLLDRIVVSDFTTQALVLCPT 81
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 43.6 bits (98), Expect = 0.001
Identities = 18/41 (43%), Positives = 31/41 (75%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G+DVIA++ +GTGKT +++ +L++I + QA+ILAP+
Sbjct: 41 GKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPS 81
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 43.6 bits (98), Expect = 0.001
Identities = 20/46 (43%), Positives = 35/46 (76%), Gaps = 4/46 (8%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALILAPT 380
+G D++A+AQ+GTGKTA+F++ I++++ + R +AL+LAPT
Sbjct: 40 RGDDLLAEAQTGTGKTASFALPIIEKLSKNPIDGYRPVRALVLAPT 85
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 43.6 bits (98), Expect = 0.001
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILAPT 380
A+ +G DV+A AQ+GTGKTA F++ ILQ+ + +ALIL PT
Sbjct: 34 AIRRGEDVLASAQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPT 83
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 43.6 bits (98), Expect = 0.001
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L G + A +GTGKT F + +L +IDT+++ Q LILAP+
Sbjct: 27 LTDGDSIFGLAPTGTGKTLAFVLPVLSRIDTNLKRTQVLILAPS 70
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 43.6 bits (98), Expect = 0.001
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L +GRD+I Q+ SGTGKT + I Q+ SI Q LIL PT
Sbjct: 44 LLKGRDIIYQSPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPT 87
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 43.6 bits (98), Expect = 0.001
Identities = 16/41 (39%), Positives = 30/41 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD++A+A++GTGK+ + I +L+++D QA+++ PT
Sbjct: 133 GRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPT 173
Score = 38.3 bits (85), Expect = 0.048
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
F+D LK ELL GI+ G+EKPS IQ+ +I
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESI 127
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 43.6 bits (98), Expect = 0.001
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QG D++ QAQ+GTGKT F I +++++ + Q+LILAPT
Sbjct: 38 QGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPT 78
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 43.6 bits (98), Expect = 0.001
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
Q RDVI AQ+G+GKTA F+I ILQ + + + A +LAPT
Sbjct: 140 QARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPT 181
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 43.6 bits (98), Expect = 0.001
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+ +IAQA +G+GKT F + +L ++D ++RE QAL + PT
Sbjct: 132 KHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPT 171
Score = 33.9 bits (74), Expect = 1.0
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYA-YGFEKPSAIQ 231
F+D+NL EL++G+Y FEKPS IQ
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQ 119
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/50 (40%), Positives = 35/50 (70%), Gaps = 5/50 (10%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-----ECQALILAPT 380
A+ QG+D++A A++GTGKTA F++ IL+++ + R + + L+L PT
Sbjct: 34 AIMQGKDILAGARTGTGKTAAFALPILEKLSSKERNKKRPQTRVLVLVPT 83
>UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL'
isoform 4; n=11; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 4 - Nicotiana
tabacum (Common tobacco)
Length = 425
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L+ GRD + AQ+G+GKT + + +L ID+ QALI+ PT
Sbjct: 101 LYSGRDCVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPT 144
>UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL'
isoform 5; n=2; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 5 - Nicotiana
tabacum (Common tobacco)
Length = 390
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L+ GRD + AQ+G+GKT + + +L ID+ QALI+ PT
Sbjct: 101 LYSGRDCVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPT 144
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 43.2 bits (97), Expect = 0.002
Identities = 17/40 (42%), Positives = 30/40 (75%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
R++IAQA +G+GKT F++ +L +ID +++ Q L++ PT
Sbjct: 128 RNLIAQAHNGSGKTTCFTLGMLSRIDPAVKTPQGLMICPT 167
Score = 36.3 bits (80), Expect = 0.19
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 148 ETFDDMNLKEELLRGIYA-YGFEKPSAIQQRAI 243
+TF+D+ L ELLRG+Y FEKPS IQ +
Sbjct: 87 KTFEDLGLSAELLRGLYGEMKFEKPSKIQAETL 119
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
RDV+A+A++GTGKT +F I ILQ ++ + QAL+L T
Sbjct: 59 RDVVARAKNGTGKTGSFLIPILQMVNPAKDHIQALVLLHT 98
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/47 (40%), Positives = 36/47 (76%), Gaps = 5/47 (10%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPT 380
QG+D++A+A++G+GKTA +SI I+Q++ ++I+ +A++L PT
Sbjct: 59 QGKDILAKARTGSGKTAAYSIPIIQKVLMAKEKSNIKGVKAVVLVPT 105
Score = 31.9 bits (69), Expect = 4.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
TF+ M L +LR + GF+ PS +Q ++I
Sbjct: 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSI 54
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G+D+I A++G+GKTA F+I ILQ++ + +LILAPT
Sbjct: 78 GKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPT 118
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 43.2 bits (97), Expect = 0.002
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTS 344
G D++ QA+SG GKTA F +SILQQ+DT+
Sbjct: 92 GTDILCQAKSGMGKTAVFVLSILQQLDTN 120
Score = 35.1 bits (77), Expect = 0.45
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 255
F D LK ELLR I GFE PS +QQ I I
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAI 90
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 43.2 bits (97), Expect = 0.002
Identities = 17/44 (38%), Positives = 33/44 (75%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+ QG++++ Q+Q+G+GKTATFSI L ++ + + + +I++PT
Sbjct: 54 ISQGKNIMFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPT 97
Score = 39.9 bits (89), Expect = 0.016
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +1
Query: 139 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
+V T++ M LK EL+ I G+EKPS IQQRAI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAI 51
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 43.2 bits (97), Expect = 0.002
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDT------SIRECQALILAPT 380
A+ +GRD++A AQ+GTGKTA F++ +LQ + T R +ALIL PT
Sbjct: 34 AVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPT 84
Score = 32.3 bits (70), Expect = 3.2
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
+FD + L ++LR + G+ +P+ IQQ+AI
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAI 32
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G D++ QA +GTGKT F+I I++++ + +AL+L PT
Sbjct: 36 EGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPT 77
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 42.7 bits (96), Expect = 0.002
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +1
Query: 145 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
V++F+++ LK ELL+G+Y GF +PS IQ+ A+
Sbjct: 37 VKSFEELRLKPELLKGVYQMGFNRPSRIQENAL 69
Score = 39.5 bits (88), Expect = 0.021
Identities = 18/40 (45%), Positives = 30/40 (75%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+++IAQ+QSGTGKTA F +++L ++ + + Q L +APT
Sbjct: 78 QNLIAQSQSGTGKTAAFCLAMLGIVNPADKWPQCLCIAPT 117
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPT 380
+G+D++A AQ+GTGKTA F + I+Q + R ALIL PT
Sbjct: 43 EGKDLLAAAQTGTGKTAAFGLPIIQAVQQKKRNGTPHALILVPT 86
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 42.7 bits (96), Expect = 0.002
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L +G D++ A +G+GKTA F + +LQ ID R Q LI+ PT
Sbjct: 40 LLKGCDLLGMAHTGSGKTAAFLLPLLQNIDIKQRFVQGLIIVPT 83
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/41 (41%), Positives = 29/41 (70%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D+ A A++G+GKTA +I ++Q++D S+ Q L++ PT
Sbjct: 38 GHDLCALAETGSGKTAACAIPLIQKVDPSLDAIQGLVIVPT 78
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 42.7 bits (96), Expect = 0.002
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQALILAPT 380
+G D++ AQ+GTGKTA F + IL +I + R C+AL+LAPT
Sbjct: 93 EGHDLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACRALVLAPT 139
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATF---SISILQQIDTSI--RECQALILAPT 380
+GRD++ AQ+GTGKTA F SI L++ D I + C+ L+LAPT
Sbjct: 38 EGRDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPT 84
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/41 (51%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPT 380
R++IAQ+QSGTGKT F ++IL ++D + QAL LAP+
Sbjct: 136 RNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPS 176
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 42.3 bits (95), Expect = 0.003
Identities = 17/42 (40%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPT 380
GRD++ QAQ+GTGKTA F++ +++++ D + L++ PT
Sbjct: 88 GRDLLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLVMTPT 129
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 42.3 bits (95), Expect = 0.003
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QGRD + QA++GTGKTA F + IL + + ALILAPT
Sbjct: 8 QGRDCLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPT 46
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 42.3 bits (95), Expect = 0.003
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPT 380
GRD++A AQ+GTGKT F I L+ + DT Q LIL PT
Sbjct: 64 GRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPT 105
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 42.3 bits (95), Expect = 0.003
Identities = 27/46 (58%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISI----LQQIDT-SIRECQALILAPT 380
G+DV QAQ+GTGKTATF ISI L Q T +ALILAPT
Sbjct: 38 GKDVAGQAQTGTGKTATFLISIFTKLLSQAKTGGEHHPRALILAPT 83
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 42.3 bits (95), Expect = 0.003
Identities = 18/45 (40%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPT 380
+G+D++A AQ+GTGKTA+F++ +L+Q+ + +AL++ PT
Sbjct: 58 EGKDIMACAQTGTGKTASFALPVLEQLSKQPNDKPLLRALVMTPT 102
>UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 522
Score = 42.3 bits (95), Expect = 0.003
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 168 PQRRIVERHIRLWF*KTFCNPATRNNALHQGRDVIAQAQSGTGKTATFSISILQQIDTS- 344
P++R+ + +LW T AL QG+D++A+A++G+GKTA + I IL + S
Sbjct: 17 PEKRVYDAAKKLWDRPTPIQQTAIPPAL-QGKDILAKARTGSGKTAAYIIPILIGLSRSP 75
Query: 345 -IRECQALILAPT 380
+ALIL PT
Sbjct: 76 LPLNFKALILVPT 88
>UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;
n=2; Euteleostomi|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 645
Score = 41.9 bits (94), Expect = 0.004
Identities = 19/52 (36%), Positives = 37/52 (71%), Gaps = 6/52 (11%)
Frame = +3
Query: 243 NALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE------CQALILAPT 380
NA++ G+D+I QA++GTGKT +F++ +++++ + +E + L+LAPT
Sbjct: 186 NAVYDGKDLIGQARTGTGKTFSFAVPLVEKLQSGDQERRRGRPPKVLVLAPT 237
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 41.9 bits (94), Expect = 0.004
Identities = 17/44 (38%), Positives = 31/44 (70%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+ +G+ VI Q+Q+G+GKT TF + ++ ++ +I E Q +I AP+
Sbjct: 36 IKKGKSVIGQSQTGSGKTHTFLLPLMDKVKPTIDEVQIVITAPS 79
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 41.9 bits (94), Expect = 0.004
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G+D+IA++++G+GKTA F+I I + I QAL+L PT
Sbjct: 40 EGKDIIAKSKTGSGKTAAFAIPICESIVWEENLPQALVLEPT 81
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 41.9 bits (94), Expect = 0.004
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDT----SIRECQALILAPT 380
A+ GRDV+ AQ+G+GKTA F++ +LQQ+ + R + LIL PT
Sbjct: 38 AILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPRPTRGLILVPT 86
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 41.9 bits (94), Expect = 0.004
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDT----SIRECQALILAPT 380
A+ +G+D++ AQ+G+GKTA+F + ILQ + T R AL+L PT
Sbjct: 42 AILKGKDILGIAQTGSGKTASFVLPILQMLQTKPLGKNRHINALVLVPT 90
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 41.9 bits (94), Expect = 0.004
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D++ QAQ+GTGKTA+F I IL ++ QAL+L PT
Sbjct: 41 GLDLMGQAQTGTGKTASFGIPILNRVIKG-EGLQALVLCPT 80
Score = 32.3 bits (70), Expect = 3.2
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 148 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
E F M LK +LL+ I GFEKP+ IQ ++I
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSI 35
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 41.9 bits (94), Expect = 0.004
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPT 380
G+D++A AQ+GTGKT F + +Q + T R+ +ALIL PT
Sbjct: 39 GKDIVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALILTPT 81
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 41.9 bits (94), Expect = 0.004
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIR-ECQALILAPT 380
GRDVI AQ+GTGKTA F + ILQ++ R +A+I+ PT
Sbjct: 38 GRDVIGIAQTGTGKTAAFVLPILQRLMRGPRGRVRAMIVTPT 79
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 41.9 bits (94), Expect = 0.004
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPT 380
GRDV+ AQ+GTGKTA F + +L + + R C+ LILAPT
Sbjct: 108 GRDVLGIAQTGTGKTAAFGLPLLDALMKAGTKPAPRTCRGLILAPT 153
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 41.9 bits (94), Expect = 0.004
Identities = 18/44 (40%), Positives = 32/44 (72%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L +++IAQ+Q+G+GKT TF I++L +I+ ++ QA+ + PT
Sbjct: 195 LSSNKNLIAQSQNGSGKTLTFVIAMLCKINRTLSSLQAVCICPT 238
>UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n=2;
Dugesia japonica|Rep: Nucleolar RNA helicase II/Gu
protein - Dugesia japonica (Planarian)
Length = 627
Score = 41.9 bits (94), Expect = 0.004
Identities = 16/32 (50%), Positives = 26/32 (81%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTS 344
+H G+DVIAQA++GTGKT F++ +L +++ S
Sbjct: 78 IHTGKDVIAQAKTGTGKTFAFALPVLTKLENS 109
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 41.9 bits (94), Expect = 0.004
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 7/49 (14%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTS-------IRECQALILAPT 380
+G+D I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+APT
Sbjct: 45 RGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPT 93
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 41.5 bits (93), Expect = 0.005
Identities = 20/47 (42%), Positives = 36/47 (76%), Gaps = 5/47 (10%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI---DTSIRE--CQALILAPT 380
+G+D++A+A++G+GKTA +++ ++Q+I S+RE +ALIL PT
Sbjct: 42 EGKDLLARARTGSGKTAAYAVPVIQRILASKQSVREQDVKALILVPT 88
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 41.5 bits (93), Expect = 0.005
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
A+ G+DV A A +G+GKT + + +L+++ TS E QAL+L PT
Sbjct: 55 AMLTGKDVFALANTGSGKTLAYGLPLLERLKTS-PEQQALVLVPT 98
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 41.5 bits (93), Expect = 0.005
Identities = 16/42 (38%), Positives = 30/42 (71%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
Q +D++ ++Q+G+GKTA+F I + + ++ + QAL+L PT
Sbjct: 40 QKKDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPT 81
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 41.5 bits (93), Expect = 0.005
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD+I Q+Q+G+GKT F + + ++ E Q LIL PT
Sbjct: 78 GRDLIVQSQTGSGKTGAFLLPLFDLVNPDKEEQQVLILTPT 118
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 41.5 bits (93), Expect = 0.005
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPT 380
GRDV+ AQ+GTGKT F+ ILQ++ I R ++LIL PT
Sbjct: 38 GRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGRPIRSLILTPT 81
Score = 36.7 bits (81), Expect = 0.15
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 255
TF ++ L + +L+ + G+EKPS IQ++AI P +
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPAL 36
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 41.5 bits (93), Expect = 0.005
Identities = 20/50 (40%), Positives = 35/50 (70%), Gaps = 6/50 (12%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSI------RECQALILAPT 380
++ G+D+IAQA++GTGKT +F+I +++++ + R Q L+LAPT
Sbjct: 220 VYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPT 269
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 41.1 bits (92), Expect = 0.007
Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPT 380
A+ +G D+IA A++G+GKTA + + I+ +++T S ++LI+ PT
Sbjct: 46 AILRGNDIIAMARTGSGKTAAYLVPIINRLETHSTEGVRSLIICPT 91
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 41.1 bits (92), Expect = 0.007
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPT 380
+G+D++ AQ+G+GKTA FS+ ILQ+I + +ALILAPT
Sbjct: 123 EGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPT 169
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 41.1 bits (92), Expect = 0.007
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQALILAPT 380
AL G D++ AQ+GTGKTA FS+ I+ +ID + ++LIL PT
Sbjct: 35 ALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPT 84
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 41.1 bits (92), Expect = 0.007
Identities = 16/44 (36%), Positives = 32/44 (72%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L +G++++ ++++G+GKTA+F+I + + I+ QALI+ PT
Sbjct: 37 LLKGQNLVVRSKTGSGKTASFAIPLCENINVDYNNIQALIVVPT 80
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 41.1 bits (92), Expect = 0.007
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIREC-----QALILAPT 380
+GRDV+ AQ+GTGKTA ++ IL Q+ + R+ AL+LAPT
Sbjct: 38 EGRDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPT 84
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 41.1 bits (92), Expect = 0.007
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQID---TSIREC--QALILAPT 380
L +G D+I AQ+GTGKTA F++ IL Q+D + C Q L+L+PT
Sbjct: 30 LLEGSDLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPT 78
>UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 382
Score = 41.1 bits (92), Expect = 0.007
Identities = 14/45 (31%), Positives = 34/45 (75%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
A+ +G+D++A++ +G+GKT + + +L +++ + ++ Q LI+AP+
Sbjct: 30 AMLEGKDIVAESPTGSGKTLAYVLPLLNKVNGAKKQTQGLIVAPS 74
>UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-PA
- Drosophila melanogaster (Fruit fly)
Length = 560
Score = 41.1 bits (92), Expect = 0.007
Identities = 24/77 (31%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Frame = +3
Query: 165 EPQRRIVERHIRLWF*KTFCNPATRNNALHQGRDVIAQAQSGTGKTATFSISILQQI--- 335
E +RI++ +L + + +T L +G+DV+ +A++G+GKTAT+++ ++Q+I
Sbjct: 15 ELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKILNS 74
Query: 336 --DTSIRECQALILAPT 380
+ S + A++LAPT
Sbjct: 75 KLNASEQYVSAVVLAPT 91
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 41.1 bits (92), Expect = 0.007
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--KDAMLSLK 279
F D NL+EE+L+ I + GFE PS +Q AI P + KD + K
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAK 173
Score = 39.9 bits (89), Expect = 0.016
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPT 380
+DVI QA+SG GKTA F +S+L ID + + QAL+L T
Sbjct: 166 KDVICQAKSGKGKTAVFVLSLLHMIDPQAAPHKVQALVLCNT 207
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 41.1 bits (92), Expect = 0.007
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G D++ A++GTGKT F+I ILQ++ ALIL PT
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPT 166
>UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1220
Score = 41.1 bits (92), Expect = 0.007
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1
Query: 64 GPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
GP+ D+ + GT + VV ++ +NL +LLR I YG P+ IQQRA+
Sbjct: 618 GPNLDEAAPGTTNAAQAGTGMIQPNAVVSKWEHLNLHPDLLRSILKYGLGPPNKIQQRAL 677
Query: 244 MPCIK--DAMLSLKPSQE 291
++ D + P+QE
Sbjct: 678 PFLLRGSDIIAQAPPTQE 695
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 41.1 bits (92), Expect = 0.007
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 7/49 (14%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPT 380
+G+D I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+APT
Sbjct: 45 RGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPT 93
>UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 606
Score = 41.1 bits (92), Expect = 0.007
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPT 380
AL + RD+IA+A +G+GKTA ++I I+Q I S Q+++L PT
Sbjct: 54 ALEEKRDIIAKASTGSGKTAAYAIPIIQNIMVQGSQLGTQSVVLVPT 100
Score = 32.3 bits (70), Expect = 3.2
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
T+D +NL LL+ I GFE P+ IQ AI
Sbjct: 21 TWDSLNLDPRLLQAIDKLGFENPTLIQSSAI 51
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 40.7 bits (91), Expect = 0.009
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D+I +++SGTGKT FS L+ ++T+ Q LIL PT
Sbjct: 61 GFDLIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPT 101
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 40.7 bits (91), Expect = 0.009
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPT 380
+G+D+ AQ+GTGKT F I ++ I T I+ AL+LAPT
Sbjct: 37 EGKDITGLAQTGTGKTVAFLIPVIHNILTKGIQGIAALVLAPT 79
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 40.7 bits (91), Expect = 0.009
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 8/49 (16%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQ----QIDTSI----RECQALILAPT 380
GRDV+ AQ+GTGKTA+FS+ I+Q Q +TS +ALIL PT
Sbjct: 48 GRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPT 96
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 40.7 bits (91), Expect = 0.009
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPT 380
A+ +G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PT
Sbjct: 38 AILEGQDVMAAAQTGTGKTAGFTLPLLEILSKGENAQSNQVRALVLTPT 86
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 40.7 bits (91), Expect = 0.009
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G D+IAQAQ+GTGKTA F + I+ + + L++ PT
Sbjct: 37 EGHDMIAQAQTGTGKTAAFGLPIMSMMKAD-GSVEGLVIVPT 77
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 40.7 bits (91), Expect = 0.009
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQ-IDTSIRECQALILAPT 380
G DVI AQ+GTGKTA +++ I+Q+ + T + L++APT
Sbjct: 38 GHDVIGLAQTGTGKTAAYALPIIQKMLSTPRGRVRTLVIAPT 79
>UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3;
Eutheria|Rep: Nucleolar protein GU2 variant - Homo
sapiens (Human)
Length = 363
Score = 40.7 bits (91), Expect = 0.009
Identities = 19/50 (38%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTS------IRECQALILAPT 380
+++G+D+IAQA++GTGKT +F+I +++++ + R + L+LAPT
Sbjct: 171 VYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPT 220
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 40.7 bits (91), Expect = 0.009
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QGRD+I A++G+GKT F++ IL + + + AL+L PT
Sbjct: 49 QGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPT 90
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 40.7 bits (91), Expect = 0.009
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G D+I AQ+G+GKTA F+I IL ++ A ILAPT
Sbjct: 117 EGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPT 158
Score = 36.3 bits (80), Expect = 0.19
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +1
Query: 124 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P ++
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALE 117
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 40.7 bits (91), Expect = 0.009
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+GRDV+ A++G+GKTA F++ IL ++ AL LAPT
Sbjct: 113 EGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPT 154
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 40.7 bits (91), Expect = 0.009
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QGRD+I A++G+GKT F++ IL + + + AL+L PT
Sbjct: 60 QGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPT 101
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 40.3 bits (90), Expect = 0.012
Identities = 20/43 (46%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPT 380
GRDV+A A++G+GKTA F I + +++ T + +ALIL+PT
Sbjct: 75 GRDVVAMARTGSGKTACFLIPMFEKLKTRQAKTGARALILSPT 117
>UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 56; n=1; Danio rerio|Rep: DEAD
(Asp-Glu-Ala-Asp) box polypeptide 56 - Danio rerio
Length = 344
Score = 40.3 bits (90), Expect = 0.012
Identities = 18/47 (38%), Positives = 37/47 (78%), Gaps = 5/47 (10%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTS---IRE--CQALILAPT 380
+G+D++A+A++G+GKTA +++ ++Q++ TS +RE +A++L PT
Sbjct: 26 EGKDLLARARTGSGKTAAYAVPLIQRVLTSKQTVREQAVRAVVLVPT 72
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 40.3 bits (90), Expect = 0.012
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D+I QA+SGTGKT FS L + Q LILAPT
Sbjct: 100 GLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPT 140
Score = 31.5 bits (68), Expect = 5.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
F+ + L +L G+ A GFE+PS +Q +AI
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAI 94
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 40.3 bits (90), Expect = 0.012
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPT 380
+G D++ AQ+GTGKTA FS+ ILQ + R+ + LIL PT
Sbjct: 40 EGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPT 86
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 40.3 bits (90), Expect = 0.012
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQID--TSI-RECQALILAPT 380
QGRD++ AQ+G+GKTA F I +L ++ TS + +ALIL PT
Sbjct: 80 QGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPT 124
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 40.3 bits (90), Expect = 0.012
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
++IA+A++GTGKTA F + ++Q++ + AL+L PT
Sbjct: 86 NIIAKARTGTGKTAAFGLPLIQELGSPCEHPGALVLVPT 124
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 40.3 bits (90), Expect = 0.012
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQ-IDTSIRECQALILAPT 380
GRDV+A A +G+GKTA F + IL Q ID +AL++ PT
Sbjct: 38 GRDVMASAVTGSGKTAAFLLPILHQLIDRPRGTTRALVITPT 79
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 40.3 bits (90), Expect = 0.012
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQID------TSIRECQALILAPT 380
L +G D++ AQ+GTGKTA F+I ILQ + R+ +AL+LAPT
Sbjct: 35 LLEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPT 84
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 40.3 bits (90), Expect = 0.012
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQID---TSIRECQALILAPT 380
GRD++ QA +GTGKTA F++ +L ++ T QAL+L PT
Sbjct: 94 GRDLLGQAATGTGKTAAFALPLLHRLTDDRTGDHGPQALVLVPT 137
Score = 37.5 bits (83), Expect = 0.084
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +1
Query: 124 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 255
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P +
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLV 92
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 40.3 bits (90), Expect = 0.012
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 5/46 (10%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQALILAPT 380
GRD++ AQ+GTGKTA F++ +L + T + R +ALIL+PT
Sbjct: 41 GRDMLGIAQTGTGKTAAFALPLLHHLMTVGGKPTTRTTKALILSPT 86
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 40.3 bits (90), Expect = 0.012
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+ RDVI + +GTGKT + + + ++ +E QALIL PT
Sbjct: 39 KNRDVILHSSTGTGKTLAYLLPLFMKLSAEKKEMQALILVPT 80
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 40.3 bits (90), Expect = 0.012
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPT 380
+GRDV+A A++G+GKTA F I + +++ + +ALIL+PT
Sbjct: 75 EGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPT 118
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 40.3 bits (90), Expect = 0.012
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPT 380
G+D++A A +G+GKTA F + +L+++ D+ R + LIL PT
Sbjct: 227 GKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPT 270
Score = 32.7 bits (71), Expect = 2.4
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 136 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
++ + TF++++L LL+ + GF +P+ IQ +AI
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAI 221
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 40.3 bits (90), Expect = 0.012
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+D+IAQA +G+GKT F + +L ++D + + QA+ + PT
Sbjct: 141 KDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPT 180
Score = 30.7 bits (66), Expect = 9.6
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +1
Query: 58 KNGPSKDQGSYDGPPGMDPGTLD-----TDWDQVVET---FDDMNLKEELLRGIY-AYGF 210
++G S G GPP +D T V E+ F+D+ L ELL+G++ GF
Sbjct: 62 EHGGSGGGGDDQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGF 121
Query: 211 EKPSAIQ 231
+PS IQ
Sbjct: 122 SRPSKIQ 128
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 40.3 bits (90), Expect = 0.012
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D+I QA+SGTGKT FS L + Q LILAPT
Sbjct: 99 GLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPT 139
Score = 31.5 bits (68), Expect = 5.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
F+ + L +L G+ A GFE+PS +Q +AI
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAI 93
>UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1;
Mycoplasma penetrans|Rep: ATP-dependent RNA helicase -
Mycoplasma penetrans
Length = 457
Score = 39.9 bits (89), Expect = 0.016
Identities = 16/44 (36%), Positives = 31/44 (70%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+++ ++V+ +Q+GTGKT + + IL+ I+ +E QA+I+ PT
Sbjct: 33 INKDKNVVLVSQTGTGKTLCYLLPILENINLDSKELQAVIVVPT 76
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 39.9 bits (89), Expect = 0.016
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTS---IRECQALILAPT 380
+G DV+ AQ+GTGKTA+F++ +LQ++ S R ++LIL PT
Sbjct: 327 KGHDVLGVAQTGTGKTASFTLPMLQKLAGSRARARMPRSLILEPT 371
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 39.9 bits (89), Expect = 0.016
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 5/49 (10%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-----CQALILAPT 380
L +GRD++ AQ+GTGKTA+F++ +L ++ + R + L+LAPT
Sbjct: 41 LLEGRDLLGLAQTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPT 89
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 39.9 bits (89), Expect = 0.016
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G +++ QA +GTGKTA + + +LQ+I ++ Q LI+ PT
Sbjct: 38 EGHNLVGQAPTGTGKTAAYLLPVLQRIQRG-KKAQVLIVTPT 78
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 39.9 bits (89), Expect = 0.016
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPT 380
DV A AQ+GTGKTA F + +LQ++ D R + L++APT
Sbjct: 40 DVFATAQTGTGKTAAFGLGMLQRLRKTSDDKQRALRGLVIAPT 82
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 39.9 bits (89), Expect = 0.016
Identities = 18/42 (42%), Positives = 31/42 (73%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G+D++A+A++G+GKT + I I+Q+I I +ALI+ PT
Sbjct: 47 KGKDILAKARTGSGKTGAYLIPIVQRI-LHIASTRALIIGPT 87
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 39.9 bits (89), Expect = 0.016
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +3
Query: 243 NALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
NAL G +I QA++GTGKTA F +++L I+T + + L++ T
Sbjct: 106 NAL-LGEQLICQAKAGTGKTAVFVLTVLNTINTESNKVECLVITHT 150
Score = 33.1 bits (72), Expect = 1.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 145 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
V F + LKEELLR + GFE P+ +Q ++
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESL 104
>UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 602
Score = 39.9 bits (89), Expect = 0.016
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3
Query: 225 NPATRNNALHQGRDVIAQAQSGTGKTATFSISILQQI 335
+PA N +H G DVI AQ+G+GKTA + I IL ++
Sbjct: 141 HPAMLKNPIHLGYDVIGIAQTGSGKTAAYLIPILNKL 177
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 39.9 bits (89), Expect = 0.016
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPT 380
G D++ QA+SG GKTA F ++ LQQ++ S C L++ T
Sbjct: 78 GMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHT 119
>UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;
n=2; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 13 - Oryza sativa subsp. indica (Rice)
Length = 832
Score = 39.9 bits (89), Expect = 0.016
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQI 335
A HQG+DVI A++G+GKT F + ILQ++
Sbjct: 232 AAHQGKDVIGAAETGSGKTLAFGLPILQRL 261
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 39.9 bits (89), Expect = 0.016
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L G D+I Q+ GT T T ILQ++D + ECQAL+L PT
Sbjct: 82 LCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPT 123
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 39.5 bits (88), Expect = 0.021
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPT 380
+GRDVIA AQ+GTGKTA + + IL ++ + + A+I+APT
Sbjct: 37 EGRDVIACAQTGTGKTAAYLLPILDRLSAGEFASDVVNAVIMAPT 81
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 39.5 bits (88), Expect = 0.021
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPT 380
GRDV+ +A +G+GKT F + +L ++ + RE +ALIL+PT
Sbjct: 266 GRDVLGRASTGSGKTLAFGVPLLSRLSATPREDNRPRALILSPT 309
>UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter
caesariensis|Rep: RNA helicase DbpA - Neptuniibacter
caesariensis
Length = 191
Score = 39.5 bits (88), Expect = 0.021
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+D+IA+A++G+GKTA F I +L ++ QAL+L PT
Sbjct: 74 KDLIAKAKTGSGKTAAFGIGLLLKLRPRNFATQALVLCPT 113
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 39.5 bits (88), Expect = 0.021
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPT 380
A+ G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PT
Sbjct: 34 AVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPT 82
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 39.5 bits (88), Expect = 0.021
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPT 380
A+ GRDV+A A +G+GKTA F++ +LQ++ + S + + L+L PT
Sbjct: 42 AVLSGRDVLAGANTGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLVLVPT 92
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 39.5 bits (88), Expect = 0.021
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPT 380
+G+D+I QA++GTGKT F++ I +++ S R+ +AL+L PT
Sbjct: 37 EGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPT 81
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 39.5 bits (88), Expect = 0.021
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Frame = +3
Query: 219 FCNP--ATRNNALHQGRDVIAQAQSGTGKTATFSISILQQ-IDTSIRE----C-QALILA 374
+C P A AL +GRD+ +AQ+GTGKTA F +++ + ++ + E C +AL+LA
Sbjct: 147 YCTPIQALTLPALLEGRDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLA 206
Query: 375 PT 380
PT
Sbjct: 207 PT 208
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 39.5 bits (88), Expect = 0.021
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPT 380
A+ G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PT
Sbjct: 34 AVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPT 82
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 39.5 bits (88), Expect = 0.021
Identities = 17/40 (42%), Positives = 29/40 (72%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+D++A++++GTGKT +F I ILQ I + +++IL PT
Sbjct: 53 KDILARSKNGTGKTLSFLIPILQNIYSESYGIESIILVPT 92
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 39.5 bits (88), Expect = 0.021
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
D+I Q++SGTGKT + I+++Q + +I + A+I+ PT
Sbjct: 64 DLIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPT 102
>UniRef50_Q5KLJ5 Cluster: Translation initiation factor, putative;
n=2; Filobasidiella neoformans|Rep: Translation
initiation factor, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 932
Score = 39.5 bits (88), Expect = 0.021
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +1
Query: 13 SYSSERRSEDWPEDSKNGPSKDQ-GSYDG--PPGMDPGTLDTDWDQVVETFDDMNLKEEL 183
S+ S DWP S G + Q G DG PG G VV ++ +NLK +L
Sbjct: 301 SHGPSALSRDWP--SPGGQQQVQSGQKDGLTTPG---GAAVPGGGIVVSKWEHLNLKVDL 355
Query: 184 LRGIYAYGFEKPSAIQQRAIMPCIKDAMLSLKPSQELEKLL 306
LR I YG P+ IQ R + IK + + + E+++
Sbjct: 356 LRSISKYGIGPPNKIQTRVLPFMIKGSDIIAQAPPTTERII 396
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 39.1 bits (87), Expect = 0.028
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G++++ Q+QSG+GKT F +S LQ I+ CQ +I+ T
Sbjct: 61 KGKNLVMQSQSGSGKTMAFLLSTLQLINRKDPFCQVIIIVNT 102
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 39.1 bits (87), Expect = 0.028
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPT 380
G+DV+A AQ+GTGKTA F++ +LQ++ S + L+L PT
Sbjct: 38 GKDVMAGAQTGTGKTAGFALPLLQRLVQHGPAVSSNRARVLVLVPT 83
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 39.1 bits (87), Expect = 0.028
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIR---ECQALILAPT 380
L +G+D++ A +GTGKTA FS+ +LQ+I AL+L PT
Sbjct: 70 LLEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPT 116
Score = 32.7 bits (71), Expect = 2.4
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 82 GSYDGPPG-MDPGTLDT---DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 249
G D PPG +D T + + TF+ + L L+ + A G+E+P+ IQ+ A+ P
Sbjct: 10 GRCDFPPGGIDGATSPSTVKETSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPP 69
Query: 250 CIK 258
++
Sbjct: 70 LLE 72
>UniRef50_Q23U17 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 64
Score = 39.1 bits (87), Expect = 0.028
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 6/43 (13%)
Frame = +1
Query: 121 LDTDWDQVVETFDDMNLKEELLRGIYA------YGFEKPSAIQ 231
++T+W + V++F + LKE+LLRGIY Y F++P++IQ
Sbjct: 16 IETNWFESVDSFHKLQLKEDLLRGIYGKRFIFQYRFKQPTSIQ 58
>UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Rep:
SF2-family helicase - Plasmodium falciparum
Length = 490
Score = 39.1 bits (87), Expect = 0.028
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QG++VI +++G+GKT + SILQ+++ ++ +LIL PT
Sbjct: 106 QGKNVIGSSETGSGKTICYCWSILQELNKNVYGIFSLILLPT 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,435,839
Number of Sequences: 1657284
Number of extensions: 8255600
Number of successful extensions: 26851
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 25892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26841
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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