Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30559X
(382 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 72 2e-13
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 71 3e-13
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 68 2e-12
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 67 5e-12
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 45 2e-05
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 45 2e-05
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 45 2e-05
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 45 2e-05
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 45 2e-05
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 41 3e-04
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 41 4e-04
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 40 5e-04
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 40 7e-04
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 40 7e-04
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 40 7e-04
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 38 0.002
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 36 0.008
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 36 0.008
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 35 0.019
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 35 0.025
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 35 0.025
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 34 0.043
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 33 0.057
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 33 0.057
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 33 0.10
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 33 0.10
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 32 0.18
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 32 0.18
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 31 0.23
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 31 0.31
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 31 0.31
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 31 0.41
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 31 0.41
03_05_0865 - 28365430-28367640 31 0.41
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 30 0.71
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 30 0.71
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 30 0.71
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 29 0.94
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 29 0.94
08_02_0230 - 14572854-14574632 29 1.2
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 29 1.6
02_02_0619 - 12205718-12205845,12205941-12206142,12207240-122073... 29 1.6
08_01_0397 - 3509186-3510291,3510322-3512335 28 2.2
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 28 2.9
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 28 2.9
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 27 3.8
07_03_0918 - 22581625-22581687,22581773-22581868,22581980-225822... 27 6.6
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 27 6.6
02_05_0133 - 26117998-26118243,26118320-26119592,26120773-26121080 27 6.6
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 71.7 bits (168), Expect = 2e-13
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +1
Query: 127 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
T +D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I+P K
Sbjct: 34 TSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK 77
Score = 62.5 bits (145), Expect = 1e-10
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G DVI QAQSGTGKTATF ILQQ+D + ECQ+L+LAPT
Sbjct: 77 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPT 118
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 70.9 bits (166), Expect = 3e-13
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +1
Query: 127 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
T +D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I+P K
Sbjct: 34 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK 77
Score = 64.5 bits (150), Expect = 3e-11
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G DVI QAQSGTGKTATF ILQQ+D ++ ECQAL+LAPT
Sbjct: 77 KGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPT 118
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 68.1 bits (159), Expect = 2e-12
Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Frame = +1
Query: 94 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 255
GP MD L + +V+ +FD M ++E+LLRGIYAYGFEKPSAIQQRA++P I
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPII 66
Score = 64.1 bits (149), Expect = 4e-11
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRDVIAQAQSGTGKT+ S+S+ Q +DT++RE QALIL+PT
Sbjct: 68 GRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPT 108
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 66.9 bits (156), Expect = 5e-12
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Frame = +1
Query: 94 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI 255
GP MD L + +V+ +FD M ++++LLRGIYAYGFEKPSAIQQRA++P I
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPII 66
Score = 64.1 bits (149), Expect = 4e-11
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRDVIAQAQSGTGKT+ S+S+ Q +DT++RE QALIL+PT
Sbjct: 68 GRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPT 108
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D++A+A++GTGKTA F I L++ID Q +IL PT
Sbjct: 184 GSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPT 224
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
F+D LK ELL GIY GFE+PS IQ+ +I
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESI 178
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D++A+A++GTGKTA F I L++ID Q +IL PT
Sbjct: 161 GSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPT 201
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
F+D LK ELL GIY GFE+PS IQ+ +I
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESI 155
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G D++A+A++GTGKTA F I L++ID Q +IL PT
Sbjct: 171 GSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPT 211
Score = 40.3 bits (90), Expect = 5e-04
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
F+D LK ELL GIY GFE+PS IQ+ +I
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESI 165
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G DVI QA+SG GKTA F +S LQQID + AL+L T
Sbjct: 73 GMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHT 113
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G DVI QA+SG GKTA F +S LQQID + AL+L T
Sbjct: 60 GMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHT 100
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 41.1 bits (92), Expect = 3e-04
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQ-IDTSIREC-QALILAPT 380
QGRDVI Q+G+GKTA F++ I+Q ++ R C A +LAPT
Sbjct: 19 QGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAPT 62
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+GRDV+ A++G+GKTA F++ IL ++ AL LAPT
Sbjct: 113 EGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPT 154
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 40.3 bits (90), Expect = 5e-04
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+D+IAQA +G+GKT F + +L ++D + + QA+ + PT
Sbjct: 141 KDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPT 180
Score = 30.7 bits (66), Expect = 0.41
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +1
Query: 58 KNGPSKDQGSYDGPPGMDPGTLD-----TDWDQVVET---FDDMNLKEELLRGIY-AYGF 210
++G S G GPP +D T V E+ F+D+ L ELL+G++ GF
Sbjct: 62 EHGGSGGGGDDQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGF 121
Query: 211 EKPSAIQ 231
+PS IQ
Sbjct: 122 SRPSKIQ 128
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 39.9 bits (89), Expect = 7e-04
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQI 335
A HQG+DVI A++G+GKT F + ILQ++
Sbjct: 176 AAHQGKDVIGAAETGSGKTLAFGLPILQRL 205
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 39.9 bits (89), Expect = 7e-04
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L G D+I Q+ GT T T ILQ++D + ECQAL+L PT
Sbjct: 695 LCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPT 736
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 39.9 bits (89), Expect = 7e-04
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
L G+D I AQ+G+GKT + +S+ ID QAL++ PT
Sbjct: 75 LLSGQDCILHAQTGSGKTLAYLLSVFSAIDFGRSSVQALVVVPT 118
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPT 380
QG+D+I +A++GTGKT F I I+ +I + S R A+ILAPT
Sbjct: 129 QGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPT 176
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 36.3 bits (80), Expect = 0.008
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 8/49 (16%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI-----DTSIRE---CQALILAPT 380
GRD+IA+A++GTGKT F I +++Q+ S+R + L+LAPT
Sbjct: 167 GRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPT 215
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 36.3 bits (80), Expect = 0.008
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIR--ECQALILAPT 380
QG DV+A+A++GTGKT F + ++ + T R L++ PT
Sbjct: 110 QGEDVLAKAKTGTGKTVAFLLPAIELLSTLPRSPSINLLVICPT 153
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 35.1 bits (77), Expect = 0.019
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPT 380
GRD+ A +G+GKTA FS+ +L+++ + + LIL PT
Sbjct: 231 GRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIRVLILTPT 274
Score = 29.5 bits (63), Expect = 0.94
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
+F ++NL LLR A G++KP+ IQ I
Sbjct: 195 SFLELNLSRPLLRACEALGYQKPTPIQAACI 225
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 34.7 bits (76), Expect = 0.025
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI 335
QG+D++ +A++GTGKT F I IL I
Sbjct: 134 QGKDMVGRAKTGTGKTLAFGIPILDAI 160
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 34.7 bits (76), Expect = 0.025
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPT 380
G D+ A A++G+GKTA F + ++Q++ + +ALIL+PT
Sbjct: 63 GHDIAAMARTGSGKTAAFLVPMIQRLRRHDAGAGIRALILSPT 105
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 33.9 bits (74), Expect = 0.043
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE 353
QG+DV+A+A++GTGKT F +I +L + S R+
Sbjct: 42 QGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRD 77
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 33.5 bits (73), Expect = 0.057
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPT 380
L GR+ A A +G+GKT F IL +I +E +A+IL PT
Sbjct: 180 LLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPT 224
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 33.5 bits (73), Expect = 0.057
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPT 380
+GRD+I Q+G+GKT F++ I+Q + + A +L+PT
Sbjct: 77 EGRDLIGLGQTGSGKTGAFALPIIQALLKQDKPQALFACVLSPT 120
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 32.7 bits (71), Expect = 0.10
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTS 344
GRD++A AQ+G+GKTA F I+ I +S
Sbjct: 274 GRDLMACAQTGSGKTAAFCFPIISGIMSS 302
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 32.7 bits (71), Expect = 0.10
Identities = 14/41 (34%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPT 380
RD+ + +G+GKT +++ I+Q + T +R +AL++ PT
Sbjct: 75 RDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPT 115
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 31.9 bits (69), Expect = 0.18
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI 335
GRD++A AQ+G+GKTA F I+ I
Sbjct: 192 GRDLMACAQTGSGKTAAFCFPIISGI 217
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 31.9 bits (69), Expect = 0.18
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI 335
GRD++A AQ+G+GKTA F I+ I
Sbjct: 360 GRDLMACAQTGSGKTAAFCFPIISGI 385
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 31.5 bits (68), Expect = 0.23
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQI 335
++ G+DV+A+A++GTGKT F + ++ +
Sbjct: 489 IYIGKDVLAKAKTGTGKTVAFLLPAIEVV 517
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 31.1 bits (67), Expect = 0.31
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISIL 326
GRD++A AQ+G+GKTA F + ++
Sbjct: 121 GRDLMACAQTGSGKTAAFCLPVV 143
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 31.1 bits (67), Expect = 0.31
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI 335
+G+DV+ +A++GTGK+A F + ++ +
Sbjct: 378 EGKDVLVKAKTGTGKSAAFLLPAIESV 404
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 30.7 bits (66), Expect = 0.41
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDT 341
GRDV+ A++G+GKT F I +L T
Sbjct: 117 GRDVLGAAKTGSGKTLAFVIPVLMSAAT 144
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 30.7 bits (66), Expect = 0.41
Identities = 10/27 (37%), Positives = 22/27 (81%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI 335
+G+DV+A+A++G+GKT + + +L ++
Sbjct: 119 EGKDVVAKAKTGSGKTFAYLLPMLHEL 145
>03_05_0865 - 28365430-28367640
Length = 736
Score = 30.7 bits (66), Expect = 0.41
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQI 335
Q RDVI A++G+GKTA F + +L I
Sbjct: 351 QQRDVIGIAETGSGKTAAFVLPMLSYI 377
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 29.9 bits (64), Expect = 0.71
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI 335
GRD+I A++G+GKTA F + ++ I
Sbjct: 256 GRDIIGIAKTGSGKTAAFVLPMIVHI 281
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 130 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
D + +++F D +L+ I G+EKP+ IQ +A+
Sbjct: 213 DVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQAL 250
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 29.9 bits (64), Expect = 0.71
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPT 380
+GRD+I AQ+G+GKT ++ + L + R Q LILAPT
Sbjct: 192 KGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPT 238
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 29.9 bits (64), Expect = 0.71
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 46 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 141
P ++ GPS+DQ + + PP + PG D W Q
Sbjct: 392 PAVTETGPSRDQPAEE-PPAVTPGANDGFWQQ 422
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 29.5 bits (63), Expect = 0.94
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 231 ATRNNALHQGRDVIAQAQSGTGKTATFSISILQQI 335
AT + + G D++ +A++G GKT F + IL+ +
Sbjct: 132 ATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESL 166
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 29.5 bits (63), Expect = 0.94
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 151 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
+F ++ +E+L + ++GF +PS IQ A P ++
Sbjct: 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLE 276
>08_02_0230 - 14572854-14574632
Length = 592
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 11 CLIRLKEGQKIGQRIPKMGHRRIKVVTMDLREWTLGHLTPTGIKLSKPSMT*TSKKNC 184
C +RL + QK+ P++ R++ VT R G + I L P++T + NC
Sbjct: 219 CTVRLCDLQKVILAAPRLAELRLESVTFSDRPPLSGFIFDEHIHLHCPAVTSFTMVNC 276
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-------LILAPT 380
L GRD I A +G+GKT F + L + + E A L+L+PT
Sbjct: 126 LLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPT 176
>02_02_0619 -
12205718-12205845,12205941-12206142,12207240-12207315,
12208073-12208278
Length = 203
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 246 HYCALLDCRRFFKTIGVYASQQFFFEVHVIEG 151
++C +L C+R + G +++QQ FF +I G
Sbjct: 118 YHCNILGCKRLNDSTGEHSTQQRFFVELIING 149
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 198 RLWF*KTFCNPATRNNALHQGRDVIAQAQSGTGKTATFSISILQQI 335
+L F K A + GRD I A++G+GKT F + +L+ +
Sbjct: 441 KLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHV 486
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI 335
GRD I A++G+GKT F + +L+ +
Sbjct: 322 GRDCIGIAKTGSGKTLAFVLPMLRHV 347
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQI 335
L G+DV+ A++G+GKT F I ++ +
Sbjct: 130 LLNGKDVMGAAKTGSGKTLAFLIPAIEML 158
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/46 (32%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSIS---ILQQIDTSIRE-CQALILAPT 380
+ RD++A A++G+GKT + I +L+++ + R+ L+L+PT
Sbjct: 216 RNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPT 261
>07_03_0918 - 22581625-22581687,22581773-22581868,22581980-22582268,
22582341-22582477,22582567-22582683,22583277-22583440,
22583542-22583756,22583838-22584004,22584206-22584559,
22584647-22584795,22584907-22585030,22585132-22585371,
22585723-22586140,22586297-22586920,22586999-22587183,
22587302-22587412,22587583-22587789,22587869-22587967,
22588063-22588159,22588296-22588384,22588495-22588548,
22588671-22588793,22588872-22588940,22589020-22589089,
22589202-22589260,22589367-22589570,22590032-22590060,
22590375-22590433,22590513-22590634,22591637-22591830,
22591974-22592088
Length = 1680
Score = 26.6 bits (56), Expect = 6.6
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +1
Query: 124 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 222
D+DW+ ++++ D + + L + + GF+KP+
Sbjct: 1310 DSDWETLLKSIRDASYTTQPLELLNSVGFQKPN 1342
>03_05_1091 +
30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 26.6 bits (56), Expect = 6.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 240 NNALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 353
+ AL + ++I A +G GKT ++ILQQI +++
Sbjct: 520 DTALFKPDNIILCAPTGAGKTNVAVLTILQQIGLHMKD 557
>02_05_0133 - 26117998-26118243,26118320-26119592,26120773-26121080
Length = 608
Score = 26.6 bits (56), Expect = 6.6
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +1
Query: 61 NGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 225
N P K +G P + +TD D++ + D ++ ++ Y F+KP+A
Sbjct: 523 NAPDKKVEGSEGEPNVTAAAEETDSDEMCGEYTDDGDDDDKMQ--YKIEFQKPTA 575
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,889,559
Number of Sequences: 37544
Number of extensions: 228007
Number of successful extensions: 771
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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