Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30559X
(382 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 79 8e-16
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 79 8e-16
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 73 9e-14
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 73 9e-14
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 56 6e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 46 1e-05
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 44 3e-05
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 44 4e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 44 4e-05
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 41 3e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 41 3e-04
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 38 0.002
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 38 0.002
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 38 0.002
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 37 0.004
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 37 0.004
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 37 0.004
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 37 0.006
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 37 0.006
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.010
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.010
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 36 0.010
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 33 0.069
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 33 0.091
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 33 0.091
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 33 0.091
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 31 0.21
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 31 0.21
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 31 0.21
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 31 0.21
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.21
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 31 0.28
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 31 0.37
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 30 0.49
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 30 0.49
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 30 0.49
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 29 0.85
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 29 0.85
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 29 1.5
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 1.5
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 29 1.5
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 1.5
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 2.6
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 28 2.6
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 27 4.5
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z48584-8|CAK55179.1| 435|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z48584-7|CAH04712.1| 448|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z48584-2|CAA88477.2| 481|Caenorhabditis elegans Hypothetical pr... 27 6.0
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 27 6.0
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 27 6.0
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 27 6.0
CU457741-9|CAM36350.2| 252|Caenorhabditis elegans Hypothetical ... 27 6.0
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 27 6.0
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 27 6.0
U21317-8|AAA62528.1| 267|Caenorhabditis elegans Hypothetical pr... 26 7.9
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 26 7.9
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 26 7.9
AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical ... 26 7.9
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 26 7.9
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 26 7.9
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 79.4 bits (187), Expect = 8e-16
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = +1
Query: 115 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 252
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPC 63
Score = 63.3 bits (147), Expect = 6e-11
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APT
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPT 106
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 79.4 bits (187), Expect = 8e-16
Identities = 34/46 (73%), Positives = 42/46 (91%)
Frame = +1
Query: 115 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 252
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPC 63
Score = 63.3 bits (147), Expect = 6e-11
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APT
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPT 106
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 72.5 bits (170), Expect = 9e-14
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
A+ + RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PT
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPT 103
Score = 63.3 bits (147), Expect = 6e-11
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +1
Query: 142 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ +K
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILK 62
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 72.5 bits (170), Expect = 9e-14
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
A+ + RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PT
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPT 103
Score = 63.3 bits (147), Expect = 6e-11
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +1
Query: 142 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIK 258
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI +K
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILK 62
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 56.4 bits (130), Expect = 6e-09
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 163 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIKDAMLSLKPSQELEKLLLSL 315
M LKEELLRGIY +GFEKPSAIQ+ A+ PC ++++ K ++SL
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51
Score = 39.9 bits (89), Expect = 6e-04
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAP 377
G+DV Q+Q+G+GKT I ILQ ID Q ++LAP
Sbjct: 33 GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAP 72
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 45.6 bits (103), Expect = 1e-05
Identities = 15/41 (36%), Positives = 32/41 (78%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G+D++A+A++GTGKT + I ++++I +++ QA+++ PT
Sbjct: 80 GQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPT 120
Score = 33.9 bits (74), Expect = 0.040
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 154 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
F+D L +LL GI+ G+EKPS IQ+ +I
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASI 74
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 44.4 bits (100), Expect = 3e-05
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPT 288
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 44.4 bits (100), Expect = 3e-05
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPT 313
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 44.4 bits (100), Expect = 3e-05
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPT 697
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 44.0 bits (99), Expect = 4e-05
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PT
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPT 99
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 44.0 bits (99), Expect = 4e-05
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PT
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPT 99
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G D++ A++GTGKT F+I ILQ++ ALIL PT
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPT 166
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
+G D++ A++GTGKT F+I ILQ++ ALIL PT
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPT 166
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 39.5 bits (88), Expect = 8e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
QG+DVI A++G+GKT F+I +LQ + + L+L PT
Sbjct: 80 QGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPT 121
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G DV+ QA+SG GKTA F I+ LQQ++ E + + T
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHT 118
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G DV+ QA+SG GKTA F I+ LQQ++ E + + T
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHT 118
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 380
G DV+ QA+SG GKTA F I+ LQQ++ E + + T
Sbjct: 77 GMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHT 117
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 37.1 bits (82), Expect = 0.004
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQI 335
+HQG D++A AQ+G+GKTA F + I+ ++
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARL 614
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 37.1 bits (82), Expect = 0.004
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQI 335
+HQG D++A AQ+G+GKTA F + I+ ++
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARL 614
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 37.1 bits (82), Expect = 0.004
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQI 335
+HQG D++A AQ+G+GKTA F + I+ ++
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARL 614
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 36.7 bits (81), Expect = 0.006
Identities = 17/42 (40%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPT 380
G+DV+A +++G+GKTA F I +LQ++ +AL+++PT
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 36.7 bits (81), Expect = 0.006
Identities = 17/42 (40%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPT 380
G+DV+A +++G+GKTA F I +LQ++ +AL+++PT
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.9 bits (79), Expect = 0.010
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQI 335
+HQG D++A AQ+G+GKTA F + I+ ++
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRL 403
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.9 bits (79), Expect = 0.010
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQI 335
+HQG D++A AQ+G+GKTA F + I+ ++
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRL 403
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 35.9 bits (79), Expect = 0.010
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQI 335
+HQG D++A AQ+G+GKTA F + I+ ++
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRL 403
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 33.1 bits (72), Expect = 0.069
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQI 335
AL GRD+++ AQ+G+GKTA F + ++ I
Sbjct: 199 ALQGGRDLMSCAQTGSGKTAAFLVPLVNAI 228
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 32.7 bits (71), Expect = 0.091
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI 335
G+D++A AQ+G+GKTA F + I+ ++
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRL 360
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 32.7 bits (71), Expect = 0.091
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI 335
G+D++A AQ+G+GKTA F + I+ ++
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRL 360
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 32.7 bits (71), Expect = 0.091
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPT 380
G+D+ A A +GTGKTA F + IL+++ + C + L+L PT
Sbjct: 185 GKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPT 228
Score = 30.7 bits (66), Expect = 0.37
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 222
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 223 AIQQRAI 243
IQQ I
Sbjct: 173 PIQQACI 179
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI 335
G DV+ QA++ GKTA F + I+ +I
Sbjct: 418 GHDVLGQAETSAGKTAAFGLPIIDKI 443
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 31.5 bits (68), Expect = 0.21
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQI 335
RD+++ AQ+G+GKTA F + I+Q I
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHI 201
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 31.5 bits (68), Expect = 0.21
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQI 335
RD+++ AQ+G+GKTA F + I+Q I
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHI 185
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 31.5 bits (68), Expect = 0.21
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQI 335
RD+++ AQ+G+GKTA F + I+Q I
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHI 182
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.21
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 109 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 11
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 255 QGRDVIAQAQSGTGKTATFSISIL 326
Q RDVI A++G+GKTA F + +L
Sbjct: 337 QNRDVIGVAETGSGKTAAFLLPLL 360
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 30.7 bits (66), Expect = 0.37
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPT 380
++ GRDVI A++G+GKT F + + + I + E A+ILAPT
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPT 386
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 30.3 bits (65), Expect = 0.49
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 11/56 (19%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPT 380
A+ +DV+ A++G+GKT F I ++ ++ T +R +ALI+APT
Sbjct: 22 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPT 77
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 30.3 bits (65), Expect = 0.49
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 11/56 (19%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPT 380
A+ +DV+ A++G+GKT F I ++ ++ T +R +ALI+APT
Sbjct: 189 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPT 244
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 30.3 bits (65), Expect = 0.49
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 112 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 243
P + D++ +TF D L E +L+ I G+EK + +Q+ I
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 29.5 bits (63), Expect = 0.85
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 353
L G+D I +Q+G+GKT F + L ID + +
Sbjct: 118 LLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQ 152
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 29.5 bits (63), Expect = 0.85
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 249 LHQGRDVIAQAQSGTGKTATFSISILQ 329
L +G+DV+A A++G+GKT F + ++
Sbjct: 102 LLEGKDVLASAKTGSGKTLAFLLPAIE 128
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI 335
GRD+I+ A++G+GKT F + L I
Sbjct: 166 GRDIISIAKTGSGKTLAFMLPALVHI 191
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPT 380
GRDV+ A++G+GKTA + + I+ Q D E A+I+ PT
Sbjct: 302 GRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPT 347
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 267 VIAQAQSGTGKTATFSISILQQIDTSIREC 356
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 246 ALHQGRDVIAQAQSGTGKTATFSISILQ 329
A+ G D + A++G+GKT FS+ I Q
Sbjct: 35 AILGGADALIAAETGSGKTGAFSLPIAQ 62
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 79 DPSMAHFWNPLANLLTFFQTNKT 11
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 22 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 162
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISIL 326
GRD+I A +G+GKT TF + ++
Sbjct: 227 GRDMIGIASTGSGKTMTFVLPLV 249
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 378 WEPGSKLDIHECLYRFVVESI*RK 307
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 264 DVIAQAQSGTGKTATFSISILQQIDTS---IRECQALILAPT 380
DV+ ++ +G+GKT F + +++ I + + ALIL+P+
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPS 89
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 261 RDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAP 377
RDV A +G+GKT + + +L + + + QA+IL P
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVP 196
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 10 MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 141
++Y+SE +DW + +D GS G + D D+++
Sbjct: 1243 VNYASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 10 MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 141
++Y+SE +DW + +D GS G + D D+++
Sbjct: 1243 VNYASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286
>Z48584-8|CAK55179.1| 435|Caenorhabditis elegans Hypothetical
protein ZK1321.2f protein.
Length = 435
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 245 IIARCWIAEGFSKP*AYMPLNNSSLR 168
++ WIAEG+ KP M NN + R
Sbjct: 133 LLEEFWIAEGYEKPKEVMMPNNKTQR 158
>Z48584-7|CAH04712.1| 448|Caenorhabditis elegans Hypothetical
protein ZK1321.2e protein.
Length = 448
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 245 IIARCWIAEGFSKP*AYMPLNNSSLR 168
++ WIAEG+ KP M NN + R
Sbjct: 146 LLEEFWIAEGYEKPKEVMMPNNKTQR 171
>Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical
protein ZK1321.2d protein.
Length = 501
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 245 IIARCWIAEGFSKP*AYMPLNNSSLR 168
++ WIAEG+ KP M NN + R
Sbjct: 199 LLEEFWIAEGYEKPKEVMMPNNKTQR 224
>Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical
protein ZK1321.2c protein.
Length = 536
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 245 IIARCWIAEGFSKP*AYMPLNNSSLR 168
++ WIAEG+ KP M NN + R
Sbjct: 234 LLEEFWIAEGYEKPKEVMMPNNKTQR 259
>Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical
protein ZK1321.2b protein.
Length = 524
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 245 IIARCWIAEGFSKP*AYMPLNNSSLR 168
++ WIAEG+ KP M NN + R
Sbjct: 222 LLEEFWIAEGYEKPKEVMMPNNKTQR 247
>Z48584-2|CAA88477.2| 481|Caenorhabditis elegans Hypothetical
protein ZK1321.2a protein.
Length = 481
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 245 IIARCWIAEGFSKP*AYMPLNNSSLR 168
++ WIAEG+ KP M NN + R
Sbjct: 179 LLEEFWIAEGYEKPKEVMMPNNKTQR 204
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 46 PEDSKNGPSKDQGSYDGPPGMDPGTLDT 129
P K P D SY GPPG PG T
Sbjct: 202 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 228
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 46 PEDSKNGPSKDQGSYDGPPGMDPGTLDT 129
P K P D SY GPPG PG T
Sbjct: 266 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 292
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 46 PEDSKNGPSKDQGSYDGPPGMDPGTLDT 129
P K P D SY GPPG PG T
Sbjct: 266 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 292
>CU457741-9|CAM36350.2| 252|Caenorhabditis elegans Hypothetical
protein C42C1.9 protein.
Length = 252
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 316 IEKVAVFPVPDWA*AITSRP*CKALLRVAGLQKVFQNHRRICLSTILL 173
+++ FP+PDW A+ R ALL++ Q + H + L I L
Sbjct: 102 LDEYGKFPLPDWMTAVIVRDIANALLQLHSNQVL---HGAVTLENIFL 146
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 10 MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 141
++Y+SE +DW + +D GS G + D D+++
Sbjct: 1243 VNYASENMGQDWSAQNNQQQEEDDGSEYGSDNGELLQTDEDYEE 1286
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSISILQQI 335
G DV+ A++G+GKT I +L+ +
Sbjct: 113 GSDVVGAAKTGSGKTLALVIPVLEAL 138
>U21317-8|AAA62528.1| 267|Caenorhabditis elegans Hypothetical
protein B0495.9 protein.
Length = 267
Score = 26.2 bits (55), Expect = 7.9
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +1
Query: 25 ERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTL 123
+ ++++ ED++ G +K DGP +DP +
Sbjct: 64 QEKNQNEGEDNQKGENKTTDQQDGPKKIDPSVI 96
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +1
Query: 37 EDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELL 186
E+ P GPS G Y P G G+ T+ + D N+ E L
Sbjct: 403 EEVPMGGGGGPSVTNGGYRSPGGPPYGSASTNMRETAILDDYDNVPSEFL 452
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +1
Query: 37 EDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELL 186
E+ P GPS G Y P G G+ T+ + D N+ E L
Sbjct: 403 EEVPMGGGGGPSVTNGGYRSPGGPPYGSASTNMRETAILDDYDNVPSEFL 452
>AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical
protein C36C9.1 protein.
Length = 832
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/51 (27%), Positives = 20/51 (39%)
Frame = +1
Query: 16 YSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMN 168
+SSE S+ P K+ + S D PP P + +E D N
Sbjct: 626 WSSEATSQPAPLPCKSANPTEDSSQDAPPTSPPPRISDSLTAFLEAQQDFN 676
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSI 317
G DV+A A +G+GKT F I
Sbjct: 773 GNDVVACAHTGSGKTLAFLI 792
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 258 GRDVIAQAQSGTGKTATFSI 317
G DV+A A +G+GKT F I
Sbjct: 773 GNDVVACAHTGSGKTLAFLI 792
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,281,097
Number of Sequences: 27780
Number of extensions: 195317
Number of successful extensions: 673
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -