Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30558X
         (287 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   2.6  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   2.6  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    19   8.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    19   8.0  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 224 SLDEKRYHVGKIARV 268
           SLDEK+Y + ++ RV
Sbjct: 334 SLDEKKYILQEVVRV 348


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 130 PAVPTPHTTSVGGANDRDHEGQRK 59
           P  P P  TSV   N+ D   +RK
Sbjct: 49  PLAPAPERTSVLVTNNSDLRCKRK 72



 Score = 20.2 bits (40), Expect = 4.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 216 IPCSMCSASEMSPRPSCS 163
           +P   CS +  SP PS S
Sbjct: 191 LPTPTCSEASSSPTPSHS 208


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 90  APPTLVVCGVGTAG 131
           APP+ +  G+GT G
Sbjct: 252 APPSKINLGLGTYG 265


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 8.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 78  ITRANARRPFILPFDDAF 25
           ITRA+++    +PF+  F
Sbjct: 541 ITRASSQSSVTIPFERTF 558


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,822
Number of Sequences: 336
Number of extensions: 975
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5003479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)