Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30558X
         (287 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   2.3  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    20   7.0  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      20   7.0  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      19   9.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    19   9.2  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 197 QPPRCPRGR 171
           QPP+CPR R
Sbjct: 564 QPPQCPRFR 572


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -1

Query: 194 PPRCPRG 174
           PPRCP G
Sbjct: 58  PPRCPPG 64


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -1

Query: 194 PPRCPRG 174
           PPRCP G
Sbjct: 58  PPRCPPG 64


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = -2

Query: 115 PHTTSVGGANDRDHEGQRKKTLHL 44
           PH+     +N  DH  +   + HL
Sbjct: 32  PHSAESSASNSPDHYERFSPSTHL 55


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 212 RARCVQPPRCPR 177
           RAR ++PP  PR
Sbjct: 635 RARTLEPPIMPR 646


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,249
Number of Sequences: 438
Number of extensions: 991
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)