Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30557X
(312 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 36 0.13
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 36 0.13
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 36 0.23
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 35 0.41
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 34 0.71
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 1.6
UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep: L... 31 3.8
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 31 3.8
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 31 5.0
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 31 6.6
UniRef50_Q9VB98 Cluster: CG5521-PA; n=3; Sophophora|Rep: CG5521-... 31 6.6
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 30 8.7
UniRef50_A6TVZ9 Cluster: Resolvase, N-terminal domain; n=4; Alka... 30 8.7
UniRef50_A5CYW3 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_Q5KCD4 Cluster: Cation:cation antiporter, putative; n=2... 30 8.7
UniRef50_Q55JC6 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 36.3 bits (80), Expect = 0.13
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 147 KEDQKEWVPVTKLGRLXREEKSTNSRAFTCF-FTIKES 257
K + KEW+PVTKLGRL ++ K + F IKES
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 36.3 bits (80), Expect = 0.13
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 147 KEDQKEWVPVTKLGRLXREEKSTNSRAFTCF-FTIKES 257
K + KEW+PVTKLGRL ++ K + F IKES
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 35.5 bits (78), Expect = 0.23
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 147 KEDQKEWVPVTKLGRLXREEKSTNSRAFTCF-FTIKES 257
K + KEW+PVTKLGRL ++ K + F IKES
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 34.7 bits (76), Expect = 0.41
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3
Query: 147 KEDQKEWVPVTKLGRLXREEK 209
++++KEWVPVTKLGRL + K
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGK 48
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 33.9 bits (74), Expect = 0.71
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 147 KEDQKEWVPVTKLGRLXREEK 209
K + KEW+PVTKLGRL ++ K
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMK 74
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -1
Query: 174 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 16
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep:
Legumin-like - Lupinus albus (White lupin)
Length = 265
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 144 RAHDHGRDHDRVHEDRRGLYLHRVIRIRRENRHVHRLEQR 25
R H H H+ E+ + H+V R+RR +RH H + R
Sbjct: 113 RRHPHHHHHEEEEEEEEE-WSHQVRRVRRPHRHHHHRKDR 151
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 153 DQKEWVPVTKLGRLXREEKST 215
++K WVPVTKLGRL + K T
Sbjct: 31 EEKGWVPVTKLGRLVKAGKIT 51
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 159 KEWVPVTKLGRLXREEKSTN 218
+EW P TKLGRL +E K TN
Sbjct: 5 EEWQPKTKLGRLVKEGKITN 24
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 30.7 bits (66), Expect = 6.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 147 KEDQKEWVPVTKLGRLXREEK 209
K + KEW+P TKLG L ++ K
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMK 74
>UniRef50_Q9VB98 Cluster: CG5521-PA; n=3; Sophophora|Rep: CG5521-PA
- Drosophila melanogaster (Fruit fly)
Length = 1958
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 153 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 10
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 153 DQKEWVPVTKLGRLXREEK 209
+ KEW+PVT LGRL ++ K
Sbjct: 43 EDKEWIPVTGLGRLVKDMK 61
>UniRef50_A6TVZ9 Cluster: Resolvase, N-terminal domain; n=4;
Alkaliphilus metalliredigens QYMF|Rep: Resolvase,
N-terminal domain - Alkaliphilus metalliredigens QYMF
Length = 685
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 141 AHDHGRDHDRVHEDRRGLYLHRVIRIRRENRHV 43
A+ +GR HD+ D +GL++H IR+ E V
Sbjct: 258 AYVYGRYHDQKSVDPQGLFIHHTIRLPMEQWEV 290
>UniRef50_A5CYW3 Cluster: Putative uncharacterized protein; n=1;
Pelotomaculum thermopropionicum SI|Rep: Putative
uncharacterized protein - Pelotomaculum
thermopropionicum SI
Length = 334
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 153 LPCRA-HDHGRDHDRVHEDRRGLYLHRVIRIRRENRHVHR 37
LPC HDH H H+ R +++H RH HR
Sbjct: 247 LPCHGGHDHEHVHAHPHDHERAVHVHDHEHSHGHIRHSHR 286
>UniRef50_Q5KCD4 Cluster: Cation:cation antiporter, putative; n=2;
Filobasidiella neoformans|Rep: Cation:cation antiporter,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 765
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 5/26 (19%)
Frame = -1
Query: 141 AHDHGRDHDRVHE-----DRRGLYLH 79
AH HG DHDR H+ + RG++LH
Sbjct: 565 AHGHGHDHDRGHDHAHSHNMRGVFLH 590
>UniRef50_Q55JC6 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 839
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 5/26 (19%)
Frame = -1
Query: 141 AHDHGRDHDRVHE-----DRRGLYLH 79
AH HG DHDR H+ + RG++LH
Sbjct: 639 AHGHGHDHDRGHDHAHSHNMRGVFLH 664
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,371,881
Number of Sequences: 1657284
Number of extensions: 3155168
Number of successful extensions: 10630
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10495
length of database: 575,637,011
effective HSP length: 80
effective length of database: 443,054,291
effective search space used: 10190248693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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