Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30556
         (554 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily prot...    35   1.1  
UniRef50_Q7T9S5 Cluster: ORF_90; n=1; Adoxophyes orana granulovi...    33   4.5  
UniRef50_Q9VE04 Cluster: 39S ribosomal protein L55, mitochondria...    33   4.5  
UniRef50_UPI0000E495B7 Cluster: PREDICTED: similar to ENSANGP000...    33   5.9  
UniRef50_Q58753 Cluster: Uncharacterized protein MJ1358; n=1; Me...    32   7.8  

>UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily
           protein, putative; n=4; Mycoplasma|Rep:
           Metallo-beta-lactamase superfamily protein, putative -
           Mycoplasma capricolum subsp. capricolum (strain
           California kid / ATCC27343 / NCTC 10154)
          Length = 688

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 26  ANFIFYNNITFMITVFYLKKLTLFVNYKNDLQIIV 130
           ANFI   N  ++I   +   LT+ +NYKN L+I++
Sbjct: 33  ANFILNFNFNYLILAIFFLSLTIILNYKNTLKILL 67


>UniRef50_Q7T9S5 Cluster: ORF_90; n=1; Adoxophyes orana
           granulovirus|Rep: ORF_90 - Adoxophyes orana granulovirus
           (AoGV)
          Length = 90

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -2

Query: 208 WIFVIQAMLLLRYLFVKEFINAPL*FDN 125
           W+F+I  + L+ YL VK F N+ + +DN
Sbjct: 55  WLFIIVLLFLISYLIVKSFRNSKILYDN 82


>UniRef50_Q9VE04 Cluster: 39S ribosomal protein L55, mitochondrial
           precursor; n=4; Endopterygota|Rep: 39S ribosomal protein
           L55, mitochondrial precursor - Drosophila melanogaster
           (Fruit fly)
          Length = 107

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = +2

Query: 257 DGSTINVRYHEPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITEDLGDSFNA 421
           DGSTIN+RYHEPR                               I E++ D+FNA
Sbjct: 43  DGSTINIRYHEPRKIIKLPLDLSTLTDAERRARLEARKPRKKVKIMEEVEDNFNA 97


>UniRef50_UPI0000E495B7 Cluster: PREDICTED: similar to
           ENSANGP00000013649; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to ENSANGP00000013649
           - Strongylocentrotus purpuratus
          Length = 123

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = +3

Query: 123 LLSNYKGALINSLTKRYLNNNIACITKIHREVYSRMYYPTTI 248
           LL+ +   +  SL     N+N A I K +R+VYSRM YPT +
Sbjct: 14  LLNRFPANISYSLNLVRCNSNRAAIAKTNRKVYSRM-YPTLV 54


>UniRef50_Q58753 Cluster: Uncharacterized protein MJ1358; n=1;
           Methanocaldococcus jannaschii|Rep: Uncharacterized
           protein MJ1358 - Methanococcus jannaschii
          Length = 152

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -2

Query: 214 SLWIFVIQAMLLLRYLFVKE--FINAPL*FDNNLQIIFIIYE*CKFFQIEY 68
           S+WIF+I   LLLR+LF+K     N    F  N+  I I  E  K   IEY
Sbjct: 68  SVWIFIILIYLLLRFLFLKRVPLSNYEKKFMGNMSAIAIFLELLKI--IEY 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,625,902
Number of Sequences: 1657284
Number of extensions: 6542666
Number of successful extensions: 13525
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13522
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)