Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30556
         (554 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    24   1.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   3.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   3.1  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 44  NNITFMITVFYLKKLTLFVNY 106
           N I  M +++Y+ ++TL VNY
Sbjct: 162 NIINDMCSLYYILQITLIVNY 182


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -1

Query: 275 RLLLIHPQSNCCRVVHSRVNFPVDLRYTSNVVIKVSLC 162
           ++LLI  QS    VV S +NFP+ +    N  I+++LC
Sbjct: 636 QILLITFQSGL-NVV-SCINFPLGVLDRGNFDIEIALC 671


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -2

Query: 106 IIYE*CKF-FQIEYSYHKCNIIVKNKIC 26
           +IYE   F ++    YH CN ++   +C
Sbjct: 143 LIYEAHGFSYKCGIQYHICNTVISATVC 170


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -2

Query: 106 IIYE*CKF-FQIEYSYHKCNIIVKNKIC 26
           +IYE   F ++    YH CN ++   +C
Sbjct: 139 LIYEAHGFSYKCGIQYHICNTVISATVC 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,020
Number of Sequences: 336
Number of extensions: 2034
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)