Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30556
         (554 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071686-1|AAL49308.1|  107|Drosophila melanogaster RH10246p pro...    33   0.26 
AJ278709-1|CAB99479.1|  107|Drosophila melanogaster putative tra...    33   0.26 
AE014297-2621|AAF55632.1|  107|Drosophila melanogaster CG14283-P...    33   0.26 

>AY071686-1|AAL49308.1|  107|Drosophila melanogaster RH10246p
           protein.
          Length = 107

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = +2

Query: 257 DGSTINVRYHEPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITEDLGDSFNA 421
           DGSTIN+RYHEPR                               I E++ D+FNA
Sbjct: 43  DGSTINIRYHEPRKIIKLPLDLSTLTDAERRARLEARKPRKKVKIMEEVEDNFNA 97


>AJ278709-1|CAB99479.1|  107|Drosophila melanogaster putative
           transcription factor protein.
          Length = 107

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = +2

Query: 257 DGSTINVRYHEPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITEDLGDSFNA 421
           DGSTIN+RYHEPR                               I E++ D+FNA
Sbjct: 43  DGSTINIRYHEPRKIIKLPLDLSTLTDAERRARLEARKPRKKVKIMEEVEDNFNA 97


>AE014297-2621|AAF55632.1|  107|Drosophila melanogaster CG14283-PA
           protein.
          Length = 107

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = +2

Query: 257 DGSTINVRYHEPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITEDLGDSFNA 421
           DGSTIN+RYHEPR                               I E++ D+FNA
Sbjct: 43  DGSTINIRYHEPRKIIKLPLDLSTLTDAERRARLEARKPRKKVKIMEEVEDNFNA 97


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,180,511
Number of Sequences: 53049
Number of extensions: 286120
Number of successful extensions: 563
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)