Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30556
         (554 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g13900.1 68416.m01756 haloacid dehalogenase-like hydrolase fa...    29   2.1  
At1g54280.1 68414.m06188 haloacid dehalogenase-like hydrolase fa...    28   3.6  
At3g25610.1 68416.m03188 haloacid dehalogenase-like hydrolase fa...    27   6.4  
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea...    27   6.4  
At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase fa...    27   6.4  
At1g72700.1 68414.m08407 haloacid dehalogenase-like hydrolase fa...    27   8.4  
At1g17500.1 68414.m02150 haloacid dehalogenase-like hydrolase fa...    27   8.4  

>At3g13900.1 68416.m01756 haloacid dehalogenase-like hydrolase family
            protein similar to Potential phospholipid-transporting
            ATPase (EC 3.6.3.1) from Homo sapiens [SP|Q9Y2Q0], Mus
            musculus [SP|P70704]; contains InterPro accession
            IPR005834: Haloacid dehalogenase-like hydrolase
          Length = 1243

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 32   FIFYNNITFMITVFYLKKLTLF 97
            + FY NITF +T+FY +  T F
Sbjct: 946  YFFYKNITFGLTLFYFEAFTGF 967


>At1g54280.1 68414.m06188 haloacid dehalogenase-like hydrolase family
            protein similar to Potential phospholipid-transporting
            ATPase (EC 3.6.3.1) from Homo sapiens [SP|O43520], Mus
            musculus [SP|P70704]; contains InterPro accession
            IPR005834: Haloacid dehalogenase-like hydrolase
          Length = 1240

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 32   FIFYNNITFMITVFYLKKLTLF 97
            + FY NITF +T+FY +  T F
Sbjct: 948  YFFYKNITFGLTLFYFECFTGF 969


>At3g25610.1 68416.m03188 haloacid dehalogenase-like hydrolase
           family protein similar to Potential
           phospholipid-transporting ATPase (EC 3.6.3.1) from Mus
           musculus [SP|P98200, SP|P70704], {Bos taurus} SP|Q29449;
           contains InterPro accession IPR005834: Haloacid
           dehalogenase-like hydrolase
          Length = 1202

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 32  FIFYNNITFMITVFYLKKLTLF 97
           + FY NITF +TVF  +  T F
Sbjct: 925 YFFYKNITFGVTVFLYEAYTSF 946


>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
            family protein similar to CPY (GI:3096961) {Chironomus
            thummi}; contains Pfam PF00400: WD domain, G-beta repeat
            (8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
          Length = 2471

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 81   KNLHYS*IIKMICKLLSNYKGALINSLTKRYL 176
            KNL    +  +IC+L+    GAL ++L K+Y+
Sbjct: 1348 KNLQDEQLALVICRLIDGQGGALESNLIKKYI 1379


>At1g13210.1 68414.m01532 haloacid dehalogenase-like hydrolase
           family protein similar to Potential
           phospholipid-transporting ATPase (EC 3.6.3.1)
           (Chromaffin granule ATPase) from {Homo sapiens}
           SP|Q9Y2Q0, {Mus musculus} SP|P98200, {Bos taurus}
           SP|Q29449; contains InterPro accession IPR005834:
           Haloacid dehalogenase-like hydrolase; ESTs gb|T45045 and
           gb|AA394473 come from this gene
          Length = 1203

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 32  FIFYNNITFMITVFYLKKLTLF 97
           + FY NITF +TVF  +  T F
Sbjct: 926 YFFYKNITFGVTVFLYEAYTSF 947


>At1g72700.1 68414.m08407 haloacid dehalogenase-like hydrolase family
            protein similar to Potential phospholipid-transporting
            ATPase (EC 3.6.3.1) from Homo sapiens [SP|Q9Y2Q0,
            SP|O43520]; contains InterPro accession IPR005834:
            Haloacid dehalogenase-like hydrolase
          Length = 1228

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 32   FIFYNNITFMITVFYLKKLTLF 97
            + FY NI F +T+FY +  T F
Sbjct: 939  YFFYKNIAFGLTLFYFEAFTGF 960


>At1g17500.1 68414.m02150 haloacid dehalogenase-like hydrolase
           family protein similar to Potential
           phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
           sapiens [SP|O43520], Mus musculus [SP|P70704]; contains
           InterPro accession IPR005834: Haloacid dehalogenase-like
           hydrolase
          Length = 1218

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 32  FIFYNNITFMITVFYLKKLTLF 97
           + FY NI F +T+FY +  T F
Sbjct: 929 YFFYKNIAFGLTLFYFEAFTGF 950


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,513,225
Number of Sequences: 28952
Number of extensions: 141169
Number of successful extensions: 241
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)