Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30554
         (678 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321...    28   6.0  
07_03_0375 + 17408815-17409035,17422820-17423477,17423780-174241...    28   7.9  
01_06_1317 - 36251231-36251341,36252514-36252609,36252879-362529...    28   7.9  

>02_03_0180 -
           16031366-16031445,16031950-16032022,16032148-16032186,
           16032434-16032715,16032790-16032948,16033034-16033390,
           16033482-16033622,16033919-16034045,16034121-16034263,
           16034740-16034917,16035019-16035552,16035628-16035812,
           16036551-16036637,16036710-16036850,16036896-16037175,
           16037944-16038020,16038326-16039138,16039292-16039801,
           16039926-16040056,16040192-16040246,16040364-16040564,
           16040640-16040909,16041103-16041184,16041271-16041434,
           16041532-16041690,16041762-16042083,16042158-16042544,
           16042811-16042999,16043233-16043317,16043458-16043753,
           16043862-16043965,16044484-16044513,16044602-16044817,
           16044923-16045540,16045718-16045993,16046619-16046762,
           16046854-16046962,16047291-16047475,16047557-16047670,
           16048348-16048479,16048929-16049249,16049424-16049891,
           16054482-16054547,16054691-16054828,16054917-16055015,
           16057098-16057194,16057661-16057761,16057858-16058085,
           16059175-16059381,16059451-16059571,16059921-16059988,
           16060148-16060213,16060396-16060509,16060949-16061300,
           16063571-16063663,16063764-16063922,16064224-16064287,
           16064385-16064577,16064673-16064710,16065510-16065645,
           16065726-16065914,16065994-16066095,16067660-16067777,
           16067861-16067964,16070338-16070346,16071428-16071475,
           16071581-16071676,16072430-16072533,16073964-16074045,
           16076573-16076601,16076708-16076963
          Length = 4246

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -1

Query: 678 LKRRTASGVKNARTA*SCLGIHNSIYIINN 589
           L++RTA  V+  R   SC+G+  + Y+++N
Sbjct: 482 LQQRTAQVVQGTRGERSCVGVEPNYYVLSN 511


>07_03_0375 +
           17408815-17409035,17422820-17423477,17423780-17424161,
           17424236-17424550,17424727-17425118,17432479-17432508
          Length = 665

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/44 (25%), Positives = 26/44 (59%)
 Frame = +1

Query: 364 VILYVPCAILKFYSLKRIIIFHMVFLFKHYMF*RERFMRNLGGP 495
           +++++ C ++K  S+   +  H +F F+ YM   ++++RN   P
Sbjct: 585 IMMHLLCHLVKEISILGPVYLHNMFPFERYMGVLKKYVRNRARP 628


>01_06_1317 -
           36251231-36251341,36252514-36252609,36252879-36252956,
           36253037-36253138,36254509-36254784
          Length = 220

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 72  IYTLRRGGDFCDWTHKFFGPGNFKIFHMFIGFA 170
           I+ ++R    C W +   G  N+KIF +F+ +A
Sbjct: 86  IHEIKRKDHHCIWINNCVGHENYKIFLVFVLYA 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,825,473
Number of Sequences: 37544
Number of extensions: 246993
Number of successful extensions: 433
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)