Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30551X
         (317 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               24   0.51 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   0.89 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   1.6  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    22   2.1  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   2.7  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    20   8.3  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    20   8.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    20   8.3  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    20   8.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    20   8.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   8.3  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 0.51
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -3

Query: 231 EAQRRTXNSGKDKTGQDAADKAFEIFQCY 145
           ++ ++  N  K    +D  +KA+++ +CY
Sbjct: 90  DSTKKLFNKCKSIQNEDPCEKAYQLVKCY 118


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 185 KTQPIKPSRSSNATTKGPRHIFYF 114
           KT   K  R   +T+K PR  F+F
Sbjct: 423 KTHVWKKGRDKKSTSKKPRRKFHF 446


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +1

Query: 184 LPGLILATVXSTPLGFRLLTPG 249
           LP  ILA   S PL   LL PG
Sbjct: 348 LPSAILAMRLSHPLHGNLLPPG 369


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 201 KDKTGQDAADKAFEIFQCYYKGTKTHILF 115
           ++ TG D   K ++  QC+YK       F
Sbjct: 115 EEYTGDDC-QKTYQYVQCHYKQNPEKFFF 142


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -1

Query: 197 IRPGK-TQPIKPSRSSNATTKGPRH 126
           ++PG  + P+K  RSS+A+T    H
Sbjct: 271 VQPGHGSPPVKQHRSSSASTTCSGH 295


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 124 YFILINLEIRNYIGHSKLLHTVL 56
           Y  L+     NY+G  + +H V+
Sbjct: 375 YASLLEFVCVNYVGRKRPMHNVV 397


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 124 YFILINLEIRNYIGHSKLLHTVL 56
           Y  L+     NY+G  + +H V+
Sbjct: 344 YASLLEFVCVNYVGRKRPMHNVV 366


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 124 YFILINLEIRNYIGHSKLLHTVL 56
           Y  L+     NY+G  + +H V+
Sbjct: 395 YASLLEFVCVNYVGRKRPMHNVV 417


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 124 YFILINLEIRNYIGHSKLLHTVL 56
           Y  L+     NY+G  + +H V+
Sbjct: 344 YASLLEFVCVNYVGRKRPMHNVV 366


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 254 LPPGVNNLKPKGVL 213
           LP   NN+ PKG L
Sbjct: 94  LPSWTNNIFPKGEL 107


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 222 RRTXNSGKDKTGQDAADKA 166
           RR  NSG   +G D   +A
Sbjct: 539 RRRANSGSTSSGDDELHRA 557


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,489
Number of Sequences: 438
Number of extensions: 1295
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)