Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30549X
         (313 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   3.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   3.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   4.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   5.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   6.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   6.9  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   6.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    19   9.2  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 123 RYDKLKRNWRKPRGIDNR 176
           +++ L  +W  PRG D+R
Sbjct: 631 QFNGLDVDWEYPRGADDR 648


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 257 FGAYDGSSCWNRNRC 213
           F   + SSC N NRC
Sbjct: 39  FRKQNSSSCGNGNRC 53


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +1

Query: 154 NLEVLTTESAAIQGSILDAQHRL 222
           N E  TTESA I     DAQ RL
Sbjct: 318 NQEKTTTESAKISVIQDDAQMRL 340


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 188 IAADSVVNTSRFTPIPLKF 132
           +  D V + +  TP+PL+F
Sbjct: 454 VVKDFVFDPTERTPVPLRF 472


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 108 RHQSDRYDKLKRNWRKPRGIDNRVRSDSR 194
           R  ++  +    +WRK    DNR  + SR
Sbjct: 375 RWHNNNGNNSNNHWRKNNPNDNRNNTSSR 403


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 191 KGQYLMPNIGYGSN 232
           KGQ+  PN G+ +N
Sbjct: 317 KGQFRDPNTGFMTN 330


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 191 KGQYLMPNIGYGSN 232
           KGQ+  PN G+ +N
Sbjct: 317 KGQFRDPNTGFMTN 330


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 227 SNKMTRHMLQ 256
           SN+ TRH++Q
Sbjct: 266 SNRFTRHLIQ 275


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 277 LGPYGIHLEHMTGH 236
           LGP G+HL     H
Sbjct: 302 LGPAGVHLRKKNIH 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,161
Number of Sequences: 336
Number of extensions: 1267
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)