Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30549X
(313 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 85 5e-17
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 85 5e-17
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 85 5e-17
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 85 5e-17
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 51 6e-07
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 49 3e-06
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 38 0.008
AK022007-1|BAB13952.1| 602|Homo sapiens protein ( Homo sapiens ... 27 8.8
AB209105-1|BAD92342.1| 593|Homo sapiens huntingtin-associated p... 27 8.8
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 84.6 bits (200), Expect = 5e-17
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +3
Query: 51 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 182
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2
Query: 182 QRFKGQYLMPNIGYGSNKMTRHML 253
+RFKGQ LMPNIGYGSNK T+HML
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHML 70
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 253 PNGFRKVLVHNVKELE 300
P+GFRK LVHNVKELE
Sbjct: 71 PSGFRKFLVHNVKELE 86
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 84.6 bits (200), Expect = 5e-17
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +3
Query: 51 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 182
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2
Query: 182 QRFKGQYLMPNIGYGSNKMTRHML 253
+RFKGQ LMPNIGYGSNK T+HML
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHML 70
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 253 PNGFRKVLVHNVKELE 300
P+GFRK LVHNVKELE
Sbjct: 71 PSGFRKFLVHNVKELE 86
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 84.6 bits (200), Expect = 5e-17
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +3
Query: 51 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 182
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2
Query: 182 QRFKGQYLMPNIGYGSNKMTRHML 253
+RFKGQ LMPNIGYGSNK T+HML
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHML 70
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 253 PNGFRKVLVHNVKELE 300
P+GFRK LVHNVKELE
Sbjct: 71 PSGFRKFLVHNVKELE 86
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 84.6 bits (200), Expect = 5e-17
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +3
Query: 51 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVR 182
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVR
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVR 46
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2
Query: 182 QRFKGQYLMPNIGYGSNKMTRHML 253
+RFKGQ LMPNIGYGSNK T+HML
Sbjct: 47 RRFKGQILMPNIGYGSNKKTKHML 70
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 253 PNGFRKVLVHNVKELE 300
P+GFRK LVHNVKELE
Sbjct: 71 PSGFRKFLVHNVKELE 86
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +3
Query: 51 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 143
A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +3
Query: 51 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 140
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 127 MTNLRGIGVNLEVLTTESAAIQGSILDAQHRLRFQQDDPS--YAPNGFRKVLVHNVKELE 300
M+ LR G N EVLTT I+G + + + ++ + P+GF K LVHNVKELE
Sbjct: 1 MSKLRVTGGNTEVLTT--GFIEGLRARSMPNIGYGRNKKTKHILPSGFWKFLVHNVKELE 58
Score = 32.3 bits (70), Expect = 0.31
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 206 MPNIGYGSNKMTRHML 253
MPNIGYG NK T+H+L
Sbjct: 27 MPNIGYGRNKKTKHIL 42
>AK022007-1|BAB13952.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ11945 fis, clone HEMBB1000693, highly similar to
Homo sapiens neuroan1 mRNA. ).
Length = 602
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 30 LKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRSDSR 194
L++ +M P ++ T+ ++ R SD ++RN+ PRG + +R D R
Sbjct: 402 LQQRCRMETLPGFQETLAEELRMSLRRMISDPVYFMERNYEMPRGDTSSLRYDFR 456
>AB209105-1|BAD92342.1| 593|Homo sapiens huntingtin-associated
protein 1 isoform 2 variant protein.
Length = 593
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 30 LKETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRSDSR 194
L++ +M P ++ T+ ++ R SD ++RN+ PRG + +R D R
Sbjct: 393 LQQRCRMETLPGFQETLAEELRTSLRRMISDPVYFMERNYEMPRGDTSSLRYDFR 447
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,199,141
Number of Sequences: 237096
Number of extensions: 745562
Number of successful extensions: 1620
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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