Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30545X
(454 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 117 1e-25
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 94 1e-18
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 92 4e-18
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 88 9e-17
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 76 3e-13
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 76 4e-13
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 75 9e-13
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 71 1e-11
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 70 2e-11
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 60 2e-08
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 60 2e-08
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 59 5e-08
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 58 7e-08
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 53 3e-06
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 52 6e-06
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 45 9e-04
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 42 0.008
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 41 0.011
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 40 0.019
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.025
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 38 0.10
UniRef50_A6TKB5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.13
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 35 0.94
UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gamb... 34 1.2
UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2; ... 34 1.6
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 34 1.6
UniRef50_UPI00015529D0 Cluster: PREDICTED: similar to DNA-direct... 33 2.9
UniRef50_Q550U2 Cluster: Putative uncharacterized protein; n=2; ... 33 2.9
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 33 2.9
UniRef50_Q9RTG6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q7QUX8 Cluster: GLP_577_15796_29142; n=3; root|Rep: GLP... 33 3.8
UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella ... 32 5.0
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 32 5.0
UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain pro... 32 6.6
UniRef50_A0Y1P3 Cluster: Putative uncharacterized protein; n=1; ... 31 8.7
UniRef50_A2GF43 Cluster: Putative uncharacterized protein; n=1; ... 31 8.7
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 117 bits (281), Expect = 1e-25
Identities = 54/65 (83%), Positives = 57/65 (87%)
Frame = -3
Query: 449 TATIRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTN 270
T TIRTRK MTNRLL RKQMV DVLHPGK V KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 269 FGGGK 255
FGGGK
Sbjct: 64 FGGGK 68
Score = 96.3 bits (229), Expect = 3e-19
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = -2
Query: 258 QATGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 100
+ TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 68 KTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 94.3 bits (224), Expect = 1e-18
Identities = 41/62 (66%), Positives = 52/62 (83%)
Frame = -3
Query: 440 IRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 261
IRTRK M+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+VF FGF+T+FGG
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGG 66
Query: 260 GK 255
GK
Sbjct: 67 GK 68
Score = 49.6 bits (113), Expect = 3e-05
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = -2
Query: 258 QATGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 121
++TGFAL+YD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 68 KSTGFALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 92.3 bits (219), Expect = 4e-18
Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -3
Query: 443 TIRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 267
TIRTR MTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +F F F+T+F
Sbjct: 7 TIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCFKFRTHF 66
Query: 266 GGGK 255
GGGK
Sbjct: 67 GGGK 70
Score = 70.9 bits (166), Expect = 1e-11
Identities = 33/61 (54%), Positives = 45/61 (73%)
Frame = -2
Query: 285 RFQDKLRRWQATGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 106
+F+ +++G+ LIYDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 105 G 103
G
Sbjct: 121 G 121
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 87.8 bits (208), Expect = 9e-17
Identities = 40/64 (62%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = -3
Query: 443 TIRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 267
T+RTRK MTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Query: 266 GGGK 255
GGGK
Sbjct: 71 GGGK 74
Score = 46.8 bits (106), Expect(2) = 4e-09
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = -2
Query: 306 SRCSVRIRFQDKLRRWQATGFALIYDTLDLAKKFEPKHRLAR 181
S C +F+ ++TGF LIYD LD AKK+EPK+RL R
Sbjct: 58 SNCIFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
Score = 35.9 bits (79), Expect(2) = 4e-09
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -2
Query: 180 HGLYEKKRPTRKQRKERKNRMKKVRG 103
+GL K +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 76.2 bits (179), Expect = 3e-13
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = -3
Query: 449 TATIRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTN 270
T IRT+K++ N LL+R+Q+ DVLHP P SK +IRE+LAK KV V V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 269 FGGGK 255
+GGGK
Sbjct: 62 YGGGK 66
Score = 45.2 bits (102), Expect = 7e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = -2
Query: 258 QATGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 103
++TGFAL+YD K+EP +RL + + +K TR+ KE K ++K+ G
Sbjct: 66 KSTGFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSG 117
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 75.8 bits (178), Expect = 4e-13
Identities = 34/64 (53%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = -3
Query: 443 TIRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 267
TIR +K M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Query: 266 GGGK 255
GGG+
Sbjct: 66 GGGR 69
Score = 58.8 bits (136), Expect = 5e-08
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = -2
Query: 249 GFALIYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGT 100
GF LIY +D KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT
Sbjct: 72 GFGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGT 122
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 74.5 bits (175), Expect = 9e-13
Identities = 34/64 (53%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = -3
Query: 443 TIRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 267
T+R R+ + N LLARKQ V DV+HP VSK++++ KLAK+YKV + + +FGFKT F
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Query: 266 GGGK 255
GGG+
Sbjct: 93 GGGR 96
Score = 59.3 bits (137), Expect = 4e-08
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = -2
Query: 306 SRCSVRIRFQDKLRRWQATGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKER 130
+ C V F+ +++GF +IY+ + KKFE ++R R G+ EK T RK RKE
Sbjct: 80 ANCIVLFGFKTAFGGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKET 139
Query: 129 KNRMKKVRGT 100
KNR KKVRGT
Sbjct: 140 KNRRKKVRGT 149
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 70.9 bits (166), Expect = 1e-11
Identities = 36/64 (56%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = -3
Query: 443 TIRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 267
TIRTR L+ N LL RKQ+V D+ HPG TEI+EKLAKMYKV + + GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Query: 266 GGGK 255
GGGK
Sbjct: 69 GGGK 72
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = -2
Query: 282 FQDKLRRWQATGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 115
F K + +GFALIYDTL KKF PKH+L R GL +K + RK RKE K + +
Sbjct: 64 FVTKYGGGKTSGFALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWR 119
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 70.1 bits (164), Expect = 2e-11
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = -2
Query: 303 RCSVRIRFQDKLRRWQATGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKN 124
+C F+ ++TGF LIYD +D KKFEPKHRL R GL + + +RK KE+KN
Sbjct: 61 KCVSIFGFRTAFGGGKSTGFGLIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKN 120
Query: 123 RMKKVRG 103
R+KK+RG
Sbjct: 121 RVKKLRG 127
Score = 58.8 bits (136), Expect = 5e-08
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 20/76 (26%)
Frame = -3
Query: 422 MTNRLLARKQMV-----------CDVLHPGKPAVSK--------TEIREKLAKMYKVTPD 300
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 299 -VVFVFGFKTNFGGGK 255
V +FGF+T FGGGK
Sbjct: 61 KCVSIFGFRTAFGGGK 76
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 60.5 bits (140), Expect = 2e-08
Identities = 29/60 (48%), Positives = 37/60 (61%)
Frame = -2
Query: 282 FQDKLRRWQATGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 103
F+ K + TGF LIYD L K+FEP +R R G + + P RK KER+NR KK+RG
Sbjct: 67 FKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRNKKLRG 126
Score = 58.8 bits (136), Expect = 5e-08
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = -3
Query: 440 IRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTE-IREKLAKMYKVTPDV--VFVFGFKTN 270
IRT + N+LL RKQ + +V HP T+ IR+KLA +YKV PD V +FGFKT
Sbjct: 12 IRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQVSLFGFKTK 70
Query: 269 FGGGK 255
FGGGK
Sbjct: 71 FGGGK 75
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 60.1 bits (139), Expect = 2e-08
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = -3
Query: 443 TIRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 264
++ RK + N+LL RKQ V D+ H G A ++ EI++++A K D+V +FG +T FG
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFG 64
Query: 263 GG 258
GG
Sbjct: 65 GG 66
Score = 57.6 bits (133), Expect = 1e-07
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = -2
Query: 252 TGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 100
TGF +YD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+
Sbjct: 69 TGFGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGS 119
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 58.8 bits (136), Expect = 5e-08
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +3
Query: 258 ATSEVCLETEYEHYIGSNLVHFGELLTDLGLADGWFSWM*YIANHLLARQQSVGH*LASA 437
ATS+V +T++++ I LVH +L +D L D F+WM YI +HLLA Q+SV H L+ +
Sbjct: 69 ATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLALQKSVCHKLSCS 128
Query: 438 NSRC 449
+S C
Sbjct: 129 DSHC 132
Score = 38.3 bits (85), Expect = 0.076
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +1
Query: 67 LLGGRTYFRFLGTADLLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLGQIECVVDQSE 246
LL T+ F T LHSVL FFTL + LL++ + G V L L ++ VVD ++
Sbjct: 5 LLFTSTHICFGCTPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAK 64
Query: 247 SSCLPPPKFVLK-PNTNTTSGVTLYILASFSRISV 348
+ K K + N G +++ FS S+
Sbjct: 65 ACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFSL 99
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 58.4 bits (135), Expect = 7e-08
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = -2
Query: 258 QATGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 103
+ TGFALIYDT KFEPK RL R G+ K+ +RK KE K+++KK RG
Sbjct: 99 RTTGFALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRG 150
Score = 52.0 bits (119), Expect = 6e-06
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = -3
Query: 449 TATIRTRKLMTNRLLA-RKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKT 273
T ++TRK++ + L R+Q+ ++LHP KP S+ + ++LA YK V V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 272 NFGGGK 255
FGG +
Sbjct: 94 TFGGNR 99
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 52.8 bits (121), Expect = 3e-06
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = -3
Query: 440 IRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKV-TPDVVFVFGFKTNFG 264
++T+K N LL RKQ + + K +SK +R +L+K Y++ P ++F+FG K NFG
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 263 GGK 255
G K
Sbjct: 70 GFK 72
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = -2
Query: 261 WQATGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 103
++ + F IY L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G
Sbjct: 71 FKCSAFVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFG 123
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 52.0 bits (119), Expect = 6e-06
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = -3
Query: 425 LMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 264
L NRLL+RK++ HPG P SK EIREK++++Y+ D V V K +G
Sbjct: 5 LRDNRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYG 58
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 44.8 bits (101), Expect = 9e-04
Identities = 17/62 (27%), Positives = 36/62 (58%)
Frame = -3
Query: 440 IRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 261
I+ ++ N+L+ RK++ ++ HPG+P S+ +++ KL M + P+ + ++ FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGS 62
Query: 260 GK 255
K
Sbjct: 63 YK 64
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 41.5 bits (93), Expect = 0.008
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = -3
Query: 416 NRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKQL 249
N+LLAR++++ + +H ++ +RE +AK + VFV KT FG G+ L
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRSL 69
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 41.1 bits (92), Expect = 0.011
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -3
Query: 452 GTATIRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKT 273
G ++ + N LL RK++ V H G P + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 272 NFGGG 258
+G G
Sbjct: 96 QYGVG 100
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 40.3 bits (90), Expect = 0.019
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 392 MVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVV 294
MV +V+ PG+P K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 39.9 bits (89), Expect = 0.025
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -2
Query: 249 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 121
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 37.9 bits (84), Expect = 0.10
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 425 LMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGG 258
L N+++ RK++ V H G P S+ +IR+ ++ D+V + T +G G
Sbjct: 20 LKENKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAG 75
>UniRef50_A6TKB5 Cluster: Putative uncharacterized protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Putative
uncharacterized protein - Alkaliphilus metalliredigens
QYMF
Length = 59
Score = 37.5 bits (83), Expect = 0.13
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 210 SWPDRVCRRSKRIQLLATSEVCLETEYEHYIGSNL 314
S PD+VC +KRIQ LA E + +Y+ Y+GS L
Sbjct: 21 SEPDKVCICAKRIQFLAEKEALAKEDYKRYLGSVL 55
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 34.7 bits (76), Expect = 0.94
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -3
Query: 416 NRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 264
N LL R+++ C + GK S+ E+R K+A + P+ V V KT FG
Sbjct: 14 NPLLRRREVYCRLSFEGKTP-SRKEVRGKIAGLMNAEPERVVVDYIKTEFG 63
>UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021262 - Anopheles gambiae
str. PEST
Length = 1960
Score = 34.3 bits (75), Expect = 1.2
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 244 ESSCLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTAGFP-GCNTSQTICLRANNLLV 420
E SC PP + V KP TN + TL +L F+ + ++ G P G + + + +R N +
Sbjct: 5 EVSCTPP-RAVAKPRTNESREPTLVLLGPFTPKATVVFEGVPVGKSARRLLIVRNTNKTL 63
Query: 421 INLRVRIVAVP 453
+ + + V P
Sbjct: 64 VQVNLTRVPDP 74
>UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 326
Score = 33.9 bits (74), Expect = 1.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 244 RFDLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 95
+ +RH R+ + + + PP+PV+E E + A EQ EE P +E
Sbjct: 110 KITVRHPRNTEPFKELNPLLPPKPVKEGEEEEEKAEEEEEQKEEEPENEE 159
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 33.9 bits (74), Expect = 1.6
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 345 RDP*EARQNVQGYSRCSVRIRFQDKLRRWQATGFALI--YDTLDLAKKFEPKHRLARHGL 172
RD EA +N+ G ++ +R + R Q ALI YD+ K FEPKH L R+GL
Sbjct: 37 RDVAEALRNMLGTGGSAIVVR-KLVTRYGQGVSEALIHIYDSDVKMKMFEPKHILRRNGL 95
Query: 171 YEKKRPTRKQ 142
+++ +++
Sbjct: 96 IQEQEAKKQE 105
Score = 31.5 bits (68), Expect = 8.7
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = -3
Query: 446 ATIRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 267
+++R + N+L+ R++++ ++ H G S+ ++ E L M + V T +
Sbjct: 4 SSLRIIQEKVNKLVGRRELLVEIHHQGSGTPSRRDVAEALRNMLGTGGSAIVVRKLVTRY 63
Query: 266 GGG 258
G G
Sbjct: 64 GQG 66
>UniRef50_UPI00015529D0 Cluster: PREDICTED: similar to DNA-directed
RNA polymerase II largest subunit; n=7; Theria|Rep:
PREDICTED: similar to DNA-directed RNA polymerase II
largest subunit - Mus musculus
Length = 354
Score = 33.1 bits (72), Expect = 2.9
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = -2
Query: 369 RKTSRQQDRDP*EARQNVQGYSRCSVRIRFQDKLRRWQAT--GFALIYDTLDLAKKFEPK 196
R+ R+++R+ R+N + R R R + WQ G + KK + K
Sbjct: 206 REREREREREREREREN-EKRERERERERLSEDAAEWQKKKLGKEEEEEKKKKKKKKKKK 264
Query: 195 HRLARHGLYEKKRPTRKQRKERKNRMKK 112
+ + EKK+ T+K+ +E K +MKK
Sbjct: 265 KKKKKKKKEEKKKKTKKEEEEEKKKMKK 292
>UniRef50_Q550U2 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 378
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 234 RSKRIQ-LLATSEVCLETEYEHYIGSNLVHFGELLTDLGLADGWFSW 371
+ KRIQ +LATS++ +E E +H + + F +L +GL W W
Sbjct: 133 KRKRIQNILATSKIFIEGEKKHEVRLTIFLFVNILVFMGLKFVWVYW 179
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 33.1 bits (72), Expect = 2.9
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = -3
Query: 416 NRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGG 258
N L+ R+++V + H KP + +R+KLA++ V +++ KT +G G
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAG 80
>UniRef50_Q9RTG6 Cluster: Putative uncharacterized protein; n=1;
Deinococcus radiodurans|Rep: Putative uncharacterized
protein - Deinococcus radiodurans
Length = 111
Score = 32.7 bits (71), Expect = 3.8
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 153 WA--SSSRTGRGGLTCAWARTSWPDRVCRRSKRIQLLATSEVCLETE 287
WA RTGRG CA + W ++ RR+ R Q A SE+ L+T+
Sbjct: 51 WAIQQRQRTGRGVYVCADSPACWQEKPLRRAFRAQASAVSEL-LKTQ 96
>UniRef50_Q7QUX8 Cluster: GLP_577_15796_29142; n=3; root|Rep:
GLP_577_15796_29142 - Giardia lamblia ATCC 50803
Length = 4448
Score = 32.7 bits (71), Expect = 3.8
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +1
Query: 235 DQSESSCLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTAGFPGCNTSQTIC--LRAN 408
D + C P K L P+T VTL+ L + + P C+ +C L
Sbjct: 431 DSEKDQCSPSSKAALDPHTERNMDVTLFTLFALYNCMAVYCKVKPDCSVIDELCTSLAQK 490
Query: 409 NLLVINLRVRIVAVP 453
+ V+++ R++A P
Sbjct: 491 IVRVLSVFHRLMATP 505
>UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 548
Score = 32.3 bits (70), Expect = 5.0
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 102 YRGPSSFCSYVLYAVC--AWASSSRTGRGGLTCAWARTSWP 218
Y S C L+A C WA +++ +TC W R WP
Sbjct: 452 YDDSLSGCGRPLHAECFRMWAVTAKKSGKDVTCVWCRNEWP 492
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 32.3 bits (70), Expect = 5.0
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -3
Query: 416 NRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGG 258
N ++ R+++ V H G +S+ ++ + +A Y D+V + T +G G
Sbjct: 25 NNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIKKIHTLYGAG 77
>UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain protein;
n=1; Microscilla marina ATCC 23134|Rep: Von Willebrand
factor type A domain protein - Microscilla marina ATCC
23134
Length = 1088
Score = 31.9 bits (69), Expect = 6.6
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 226 CVVDQSESSCLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTAGFPGCNTSQ 387
C D + LPPPK V+K +TN GV + + F+ +++L G +S+
Sbjct: 875 CDCDSYKIKQLPPPKIVIKTDTN-YQGVNMTSMKGFAHNNLMLLLDVSGSMSSK 927
>UniRef50_A0Y1P3 Cluster: Putative uncharacterized protein; n=1;
Alteromonadales bacterium TW-7|Rep: Putative
uncharacterized protein - Alteromonadales bacterium TW-7
Length = 383
Score = 31.5 bits (68), Expect = 8.7
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 154 GPLLLVQAVA-G*PVLGLELLGQIECVVDQSESSCLPPPKFVLKPNTNTTSGVTLY 318
GP++L +A+A G PVL EL+G E V D + C P ++ N +T Y
Sbjct: 295 GPVVLKEAMASGIPVLTTELMGAKEIVNDDVGAKCAPSSITGIEQMLNDFCALTPY 350
>UniRef50_A2GF43 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 175
Score = 31.5 bits (68), Expect = 8.7
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = -2
Query: 297 SVRIRFQDKLRRWQATGFALIYDTLDLAKKFE--PKHRLARHGLYEKKRPTRKQRKERKN 124
++ I DK RR ++ + ++ D+ + +K E P ++ + LYE+ P K+ KE+
Sbjct: 46 NITIAQTDKFRR--SSNYEILSDSPQITEKIERYPDRKMLTNPLYERAFPLIKENKEKAE 103
Query: 123 RMKK 112
+K+
Sbjct: 104 AVKE 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,825,198
Number of Sequences: 1657284
Number of extensions: 8592517
Number of successful extensions: 29302
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 27842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29169
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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