Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30545X
         (454 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   3.8  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   3.8  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   5.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.0  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   5.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.7  

>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = -2

Query: 234 YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 112
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 229 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 276


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = -2

Query: 234 YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 112
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 246 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 293


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +3

Query: 162 SSRTGRGGLTCAWARTSWPDRVCRRSKRIQLLATSEV 272
           ++ T +G L C       P  VC R +R  ++   E+
Sbjct: 334 TNNTFKGYLKCPLCNEQHPLHVCERFERASVINREEI 370


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 344 RSC*RLVFLDVIHRKPSACAPTICWSLTCEC 436
           R C RL + ++       C P  C+  T EC
Sbjct: 477 REC-RLGYFNLDAENKFGCTPCFCYGHTLEC 506


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 380  HRKPSACAPTICWSLT 427
            HR P+ CAP +  S T
Sbjct: 1376 HRSPNGCAPNLLSSTT 1391


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -2

Query: 168 EKKRPTRKQRKERKNRMKKV 109
           +KK PT+KQ K+ + ++ K+
Sbjct: 402 QKKLPTKKQHKQLQAQLDKL 421


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,060
Number of Sequences: 2352
Number of extensions: 8676
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)