Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30545X
(454 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 96 9e-21
Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical pr... 40 6e-04
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 40 8e-04
AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical... 28 2.8
AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical ... 28 2.8
AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical ... 28 2.8
Z79604-5|CAO82054.1| 197|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z50027-6|CAO82026.1| 564|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical ... 28 3.7
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 6.4
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 6.4
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 6.4
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical pr... 27 8.4
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 27 8.4
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 96.3 bits (229), Expect = 9e-21
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = -3
Query: 443 TIRTRKLMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 264
TIRTRK++TN+LL RKQMV +V+HPG+P V K +IREK+AK+YK TPD V FGF++ G
Sbjct: 6 TIRTRKVLTNKLLYRKQMVVEVIHPGRPTVPKADIREKIAKLYKTTPDTVIPFGFESKIG 65
Query: 263 GGK 255
GGK
Sbjct: 66 GGK 68
Score = 84.6 bits (200), Expect = 3e-17
Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = -2
Query: 282 FQDKLRRWQATGFALIYDTLDLAKKFEPKHRLARHGLYEK-KRPTRKQRKERKNRMKKVR 106
F+ K+ ++ GFAL+YDT+D AKKFEPK+RL R GL K ++P RKQRKERKNR KKVR
Sbjct: 60 FESKIGGGKSKGFALVYDTIDFAKKFEPKYRLVRMGLATKVEKPGRKQRKERKNRQKKVR 119
Query: 105 GT 100
GT
Sbjct: 120 GT 121
>Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical
protein T26G10.3 protein.
Length = 91
Score = 40.3 bits (90), Expect = 6e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 392 MVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVV 294
MV +V+ PG+P K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 39.9 bits (89), Expect = 8e-04
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -2
Query: 249 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 121
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical
protein Y105E8A.28 protein.
Length = 210
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 229 HTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGP 107
H R+ + R + V PP+ E E A A EQN GP
Sbjct: 26 HLRNEELHRFRQAVPPPQQAEEAEEEADVAENVVEQNRLGP 66
>AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical
protein C45H4.14b protein.
Length = 131
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 237 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 112
I LD KK E KHR A+ +K+ ++Q K+ K +KK
Sbjct: 17 ILKKLDEKKKTEEKHR-AKQERQAQKKGAKEQAKKEKAELKK 57
>AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical
protein C45H4.14a protein.
Length = 178
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 237 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 112
I LD KK E KHR A+ +K+ ++Q K+ K +KK
Sbjct: 64 ILKKLDEKKKTEEKHR-AKQERQAQKKGAKEQAKKEKAELKK 104
>Z79604-5|CAO82054.1| 197|Caenorhabditis elegans Hypothetical
protein ZK662.6 protein.
Length = 197
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 425 LMTNRLLARKQMVCDVLHPGKPAVSKTEIREKLAKMYKVTPDVVFVF 285
L +N+ L RK +PA + E++E + + Y V PD V+
Sbjct: 100 LASNKSLTRKVRNHISTSKSRPAKTDGEVKESIIESYSVKPDTCTVY 146
>Z50027-6|CAO82026.1| 564|Caenorhabditis elegans Hypothetical
protein C39B10.2b protein.
Length = 564
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 196 LGLELLGQIECVVDQSESSCLPPPKFVLKPNTNTTSGVTLYILASFSR 339
+ + + + C D+++SS KF KP N T+G YI S ++
Sbjct: 459 MAMSIYDNVSCRKDEADSSS-EETKFSTKPKRNGTNGTRKYIDKSLNQ 505
>AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical
protein F56C11.6a protein.
Length = 548
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 205 ELLGQIECVVDQSESSCLPPPKFVLKPNTNT-TSGVTLYILASFSRISVLLTAGFPGCNT 381
ELLGQ V +SE CL F K +N G + + +V ++ + +
Sbjct: 80 ELLGQFVNTVGKSEEHCLSLNVFTPKWESNEWPDGFPVMVFIHGGGFAVHSSSNYGCASI 139
Query: 382 SQTICLRANNLLVINLRVRIV 444
++ +C + ++ IN R+ ++
Sbjct: 140 ARNLCTKDVVVVTINYRLGVL 160
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 168 EKKRPTRKQRKERKNRMKKVR 106
E+KR +K+R ERK +KVR
Sbjct: 820 ERKREKKKERDERKKEKEKVR 840
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 168 EKKRPTRKQRKERKNRMKKVR 106
E+KR +K+R ERK +KVR
Sbjct: 1111 ERKREKKKERDERKKEKEKVR 1131
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 168 EKKRPTRKQRKERKNRMKKVR 106
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 168 EKKRPTRKQRKERKNRMKKVR 106
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 168 EKKRPTRKQRKERKNRMKKVR 106
E+KR +K+R ERK +KVR
Sbjct: 820 ERKREKKKERDERKKEKEKVR 840
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 168 EKKRPTRKQRKERKNRMKKVR 106
E+KR +K+R ERK +KVR
Sbjct: 1111 ERKREKKKERDERKKEKEKVR 1131
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 168 EKKRPTRKQRKERKNRMKKVR 106
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 168 EKKRPTRKQRKERKNRMKKVR 106
E+KR +K+R ERK +KVR
Sbjct: 1126 ERKREKKKERDERKKEKEKVR 1146
>Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical
protein F57G8.3 protein.
Length = 331
Score = 26.6 bits (56), Expect = 8.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 112 LLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLG 216
L+ + + FFT F P+L++ AG P+ L +LG
Sbjct: 57 LVGAFVDFFTSFLTAPVLILPVCAGYPLGVLGMLG 91
>Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical
protein T10G3.2 protein.
Length = 346
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 285 RFQDKLRRWQATGFALIYDTLDLAKKFEPKH 193
RF +K R W G+AL++ + + +F +H
Sbjct: 130 RFYEKSRYWMTLGYALVFACILVYIEFANRH 160
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 114 SSFCSYVLYAVCAWASSSRTGRGGLTC 194
+SFC+Y L+ CA + + GG C
Sbjct: 99 ASFCNYPLFVFCAGSIGLGSWMGGCVC 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,944,391
Number of Sequences: 27780
Number of extensions: 200938
Number of successful extensions: 786
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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