Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30544
(594 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 175 6e-43
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 161 1e-38
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 157 2e-37
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 153 2e-36
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 144 2e-33
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 139 5e-32
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 134 1e-30
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 117 2e-25
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 100 5e-20
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 91 2e-17
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 90 4e-17
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 89 7e-17
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 88 1e-16
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 88 2e-16
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 82 8e-15
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 79 8e-14
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 78 1e-13
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 77 2e-13
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 77 2e-13
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 74 3e-12
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 73 5e-12
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 71 2e-11
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 71 2e-11
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 71 2e-11
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 71 2e-11
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 70 4e-11
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 68 2e-10
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 65 1e-09
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 62 1e-08
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 59 9e-08
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 56 5e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 55 1e-06
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 54 3e-06
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 54 3e-06
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 53 4e-06
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 53 4e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 52 8e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 1e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 52 1e-05
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 50 4e-05
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 48 1e-04
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 48 1e-04
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 48 2e-04
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 48 2e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 48 2e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 47 3e-04
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 47 4e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 45 0.001
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 43 0.005
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 42 0.011
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 42 0.011
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 42 0.011
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 41 0.019
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.025
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 40 0.044
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 40 0.044
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 40 0.044
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 40 0.044
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 39 0.077
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 39 0.10
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 39 0.10
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 38 0.13
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 38 0.13
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.18
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 38 0.18
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.23
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 38 0.23
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 37 0.31
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 36 0.72
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 36 0.72
UniRef50_A7SNX9 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.95
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 35 1.3
UniRef50_Q5B9U1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 2.2
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 34 2.9
UniRef50_Q1FIW5 Cluster: Chitinase precursor; n=1; Clostridium p... 33 3.8
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 33 5.0
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 5.0
UniRef50_A6PUW4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_A7F3T0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_A7S8R4 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.7
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 33 6.7
UniRef50_A2AKP6 Cluster: Novel protein; n=12; Murinae|Rep: Novel... 32 8.8
UniRef50_Q4P0S5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.8
UniRef50_A6SCI8 Cluster: Putative uncharacterized protein; n=1; ... 32 8.8
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 175 bits (426), Expect = 6e-43
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ VAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIGKPHTVPCK
Sbjct: 124 FKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCK 183
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
VTG+CGSV VRLIPAPRGTGIVSAPVPK
Sbjct: 184 VTGRCGSVLVRLIPAPRGTGIVSAPVPK 211
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
+LL MAG+ DCYTSARG T TLGNF YLTPDLW++ TKSPY EF
Sbjct: 212 KLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 269
Score = 56.0 bits (129), Expect = 6e-07
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALLPL 497
G SL DEVLKIMPVQKQTRAGQRTRFKA + +
Sbjct: 99 GASLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 130
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 161 bits (390), Expect = 1e-38
Identities = 76/99 (76%), Positives = 83/99 (83%), Gaps = 1/99 (1%)
Frame = -2
Query: 548 ETNTCRTAHT-FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 372
+ TC T F VAIGD NGH GLGVKCSKEVATAIR AIILAKLS++P+R+GYWGN
Sbjct: 57 QKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIVPLRQGYWGN 116
Query: 371 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
KIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPK
Sbjct: 117 KIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPK 155
Score = 66.9 bits (156), Expect = 3e-10
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
+LL MAG+ DCYTSAR T +LGNF YLTPDLW++ TKSPY EF
Sbjct: 156 KLLMMAGIDDCYTSARDCTASLGNFAKATFDTISKTYTYLTPDLWKETVFTKSPYEEF 213
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3
Query: 577 DEVLKIMPVQKQTRAGQRTRFKALLPL 497
DEVLKIMPVQKQT AGQRTRF A + +
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAI 74
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 157 bits (380), Expect = 2e-37
Identities = 79/133 (59%), Positives = 89/133 (66%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ VAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTVP K
Sbjct: 64 FKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTVPGK 123
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWLVYRTATPQLVVQLAPWEILLKPHMLP 159
VTG+CGSV VRLIPAPRGTG VSAPVPK A W L + ++
Sbjct: 124 VTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWGTLPRLLLMR 183
Query: 158 LPRHMPTSLLTCG 120
PR S L G
Sbjct: 184 SPRPTAISPLISG 196
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 153 bits (372), Expect = 2e-36
Identities = 64/92 (69%), Positives = 80/92 (86%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ V IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG +G PHTVP K
Sbjct: 97 FKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVK 156
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFR 243
V+GKCGSVTVRL+PAPRG G+V+APV K F +
Sbjct: 157 VSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQ 188
Score = 58.8 bits (136), Expect = 9e-08
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = -1
Query: 249 LQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
LQ+AG++DCYT +RGST TLGNF LTP+LW + P ++P E+
Sbjct: 187 LQLAGIEDCYTQSRGSTKTLGNFVKAAFAAASLTYGILTPNLWAERPFGQTPIEEY 242
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -3
Query: 589 PSLNDEVLKIMPVQKQTRAGQRTRFKALL 503
P LNDEV+K++PVQKQTRAGQRTRFKA +
Sbjct: 73 PRLNDEVMKVVPVQKQTRAGQRTRFKAFV 101
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 144 bits (348), Expect = 2e-33
Identities = 66/87 (75%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Frame = -2
Query: 548 ETNTCRTAHT-FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 372
+ TC HT F+ V IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGN
Sbjct: 53 QKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGN 112
Query: 371 KIGKPHTVPCKVTGKCGSVTVRLIPAP 291
KIGKPHTVPCKVTG+C SV V LIPAP
Sbjct: 113 KIGKPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALLPL 497
G SL DEVLKIMPVQKQT AGQ TRFKA +P+
Sbjct: 39 GASLKDEVLKIMPVQKQTCAGQHTRFKAFVPI 70
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 139 bits (336), Expect = 5e-32
Identities = 58/92 (63%), Positives = 76/92 (82%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ +V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G+PH++ K
Sbjct: 98 FKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATK 157
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFR 243
TGKCGSVTVRLIPAPRG+GIV++P K +
Sbjct: 158 TTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQ 189
Score = 50.0 bits (114), Expect = 4e-05
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -3
Query: 589 PSLNDEVLKIMPVQKQTRAGQRTRFKALL 503
P L DEV+ I PVQKQTRAGQRTRFKA++
Sbjct: 74 PGLQDEVMNIKPVQKQTRAGQRTRFKAVV 102
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 94
+LLQ+AGV+D YT + G T TL N +LTP+LW + PL SP
Sbjct: 186 KLLQLAGVEDVYTQSNGKTRTLENTLKAAFVAIGNTYGFLTPNLWAEQPLPVSP 239
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 134 bits (324), Expect = 1e-30
Identities = 59/88 (67%), Positives = 74/88 (84%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ V +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G+PHT+P K
Sbjct: 114 FKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHTIPTK 173
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
V GKCGSV VRLIPAPRG GIV++ K
Sbjct: 174 VHGKCGSVHVRLIPAPRGAGIVASGTVK 201
Score = 48.8 bits (111), Expect = 9e-05
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
++L MAG+ D YT +RG T TLGN +LTPDLW + K P EF
Sbjct: 202 KVLAMAGLHDVYTCSRGHTRTLGNSVKATYEALKNSYGFLTPDLWAETRFAKPPAQEF 259
Score = 45.6 bits (103), Expect = 9e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALL 503
G L DEV+KI PVQKQT AGQR RFKA +
Sbjct: 89 GGELKDEVMKICPVQKQTTAGQRMRFKAFV 118
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 117 bits (281), Expect = 2e-25
Identities = 51/90 (56%), Positives = 64/90 (71%)
Frame = -2
Query: 515 QGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKV 336
+ +V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W GKPHTV CK
Sbjct: 86 KAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVSCKG 145
Query: 335 TGKCGSVTVRLIPAPRGTGIVSAPVPKSFF 246
+GKCG+ V++IPAPRGTGI+S V K F
Sbjct: 146 SGKCGTSVVQVIPAPRGTGIISGSVNKKIF 175
Score = 41.9 bits (94), Expect = 0.011
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALL 503
G S+ +EVL I VQKQTRAGQ+TR KA++
Sbjct: 60 GNSIKEEVLSIKSVQKQTRAGQKTRIKAVV 89
Score = 41.1 bits (92), Expect = 0.019
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
++ ++AG++D YT + G+T T NF + PD W + P T +P EF
Sbjct: 173 KIFELAGIKDLYTLSFGATSTTENFAKASIAALEATSSMILPDQWEEKPRTLNPLLEF 230
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 99.5 bits (237), Expect = 5e-20
Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Frame = -2
Query: 539 TCRTAHT-FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 363
TC T F+ V +G + GH+ LG+K S EVA IILAKLS++PV G ++
Sbjct: 100 TCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL- 151
Query: 362 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
+PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVPK
Sbjct: 152 EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVPK 187
Score = 39.5 bits (88), Expect = 0.058
Identities = 24/60 (40%), Positives = 30/60 (50%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEFKV 76
+LL MAG+ D +SA G T TLGNF YL PDL ++ KS Y +V
Sbjct: 187 KLLMMAGIDDS-SSASGCTATLGNFTKAIFDTISKTHSYLIPDLQKETVFAKSLYQNSRV 245
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 90.6 bits (215), Expect = 2e-17
Identities = 48/81 (59%), Positives = 57/81 (70%)
Frame = -2
Query: 497 GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGS 318
GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV CKVTG GS
Sbjct: 113 GDYNGHVITGLD---EVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVLCKVTGH-GS 168
Query: 317 VTVRLIPAPRGTGIVSAPVPK 255
V++ LIPAPR T I SAP+PK
Sbjct: 169 VSLHLIPAPRDTVISSAPMPK 189
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 89.8 bits (213), Expect = 4e-17
Identities = 40/80 (50%), Positives = 57/80 (71%)
Frame = -2
Query: 506 VAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGK 327
V +GD +GH+GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK
Sbjct: 134 VLVGDLDGHVGLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGK 193
Query: 326 CGSVTVRLIPAPRGTGIVSA 267
GSV V + PAP+GTGIV++
Sbjct: 194 AGSVVVCIKPAPKGTGIVAS 213
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 89.0 bits (211), Expect = 7e-17
Identities = 50/92 (54%), Positives = 57/92 (61%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ V D NGH+ L EVATAIRGAIIL + S+ G+ GNKI KPHTV C+
Sbjct: 30 FKAFVVFRDYNGHVSL------EVATAIRGAIILDRSSIAIAWGGWSGNKIAKPHTVSCR 83
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFR 243
VT SV V I APRGT I+SAPVPK R
Sbjct: 84 VTRLYCSVLVHHISAPRGTDILSAPVPKKLLR 115
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 88.2 bits (209), Expect = 1e-16
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVP 345
F+ + A+G+ +G++GLG+ KEV AIR AI AKL+++ ++RG W + +PH+VP
Sbjct: 83 FRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVP 142
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFR 243
V GK GSV VRLIP PRG G+V V K R
Sbjct: 143 FAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILR 176
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVP 345
++ V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W G PH++P
Sbjct: 79 YRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIP 138
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKS 252
G CGSV V L+PAPRG G+V+ V K+
Sbjct: 139 FTAKGACGSVKVELLPAPRGVGLVAGNVAKA 169
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 82.2 bits (194), Expect = 8e-15
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVP 345
++ +V +G+ +G++ +G +K++ AI+ AI AK++++PVRRG W G+PH++P
Sbjct: 76 YKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCGEPHSLP 135
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRW 240
KV GK GSV V L+PAP+GTG+V V K+ +
Sbjct: 136 FKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTY 170
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 79.0 bits (186), Expect = 8e-14
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = -2
Query: 500 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGK 327
+G+ NG++G+G +KE A AI+ AI AKL+++ ++RG W GKPHT+P V GK
Sbjct: 74 VGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCGKPHTLPFLVNGK 133
Query: 326 CGSVTVRLIPAPRGTGIVSAPVPKSFFR 243
GSV+V L PAP+G G+ V K R
Sbjct: 134 SGSVSVTLKPAPQGVGLAVGDVVKVILR 161
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 78.2 bits (184), Expect = 1e-13
Identities = 43/83 (51%), Positives = 51/83 (61%)
Frame = -2
Query: 497 GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGS 318
GD NGH+GLG+KCSKEVATA +G + +L ++ + V KVT GS
Sbjct: 19 GDYNGHVGLGIKCSKEVATAFQGLWVKMQLGE---------TRLSRSTLVQYKVTSHYGS 69
Query: 317 VTVRLIPAPRGTGIVSAPVPKSF 249
V V LIPAPRGTGIVSAPV F
Sbjct: 70 VLVHLIPAPRGTGIVSAPVLTKF 92
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 77.4 bits (182), Expect = 2e-13
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVP 345
F+ IVA G+ NG++G+G SK++ AI A A L+V P++ G W + + H+VP
Sbjct: 109 FKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECRCDQKHSVP 168
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVS 270
KV GK GSVT+ +IPAPRG G+V+
Sbjct: 169 FKVKGKGGSVTIEIIPAPRGLGLVA 193
Score = 32.3 bits (70), Expect = 8.8
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 589 PSLNDEVLKIMPVQKQTRAGQRTRFKALL 503
P L EV+ + +QK T GQ TRFKA++
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIV 113
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 77.4 bits (182), Expect = 2e-13
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVP 345
++ I +GD +GH+G+G+ S ++ A AI AKL+++ V RG W G PH++P
Sbjct: 83 YEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSWECACGAPHSIP 142
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFR 243
+V GK GSV V L PAP+G GIV+ K FR
Sbjct: 143 YQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFR 176
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVP 345
F + +G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP
Sbjct: 55 FNVLCVVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVP 114
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIV 273
K+TG+ GS V L+PAP G G+V
Sbjct: 115 LKITGRSGSTRVTLMPAPAGKGLV 138
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 72.9 bits (171), Expect = 5e-12
Identities = 40/72 (55%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = -2
Query: 467 VKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTG-KCGSVTVRLIPAP 291
V CSKEV TA + AI L + + GY GNKIG PHT+PC VT + V V L AP
Sbjct: 94 VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAP 152
Query: 290 RGTGIVSAPVPK 255
RGTG VSA VPK
Sbjct: 153 RGTGTVSASVPK 164
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
+LL MAG+ DCYTSARG T TLGNF YLTPDLW++ TKSPY EF
Sbjct: 154 KLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 211
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -2
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
KVTG+CGSV VRLIPAPRGTGIVSAPVPK
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPK 153
Score = 53.6 bits (123), Expect = 3e-06
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFK 512
G SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 99 GASLKDEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
+LL MAG+ DCYTSARG T TLGNF YLTPDLW++ TKSPY EF
Sbjct: 16 KLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 73
Score = 35.9 bits (79), Expect = 0.72
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 299 PAPRGTGIVSAPVPK 255
PAPRGTGIVSAPVPK
Sbjct: 1 PAPRGTGIVSAPVPK 15
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVP 345
F+ IVA G+ NG++G+G +K++ AI A A L+V P++ G W + + H+VP
Sbjct: 90 FKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECRCDQKHSVP 149
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVS 270
KV GK GSV + ++PAPRG G+V+
Sbjct: 150 FKVRGKGGSVVIEILPAPRGLGLVA 174
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/90 (40%), Positives = 58/90 (64%)
Frame = +3
Query: 249 EALRNWRRHNSSTTRGRNQPDCYRTTLAGDLARDGVWLSDLVTPVTSSNW*NRQLSKDNS 428
+ L +W ++ T+ NQ + TTL L GV L+ + TPVTSS+W N QL D++
Sbjct: 70 QLLDSWGGDDTGTSWSWNQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDT 129
Query: 429 ASNGSGDFLAALHTQTNMTVVVANGNNALK 518
S+G+ +FL+ L+TQT++TV V N +++L+
Sbjct: 130 GSDGTSNFLSGLNTQTDVTVGVTNDDDSLE 159
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVP 345
F+ +VA+G+ +G IG +V AI+ AI +AKL+++ V RG W G+PHTV
Sbjct: 70 FRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRPHTVA 129
Query: 344 CKVTGKCGSVTVRLIPAPRGTGI 276
+ GK GSV V L PAPRG G+
Sbjct: 130 LRTEGKAGSVEVELQPAPRGLGL 152
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = -2
Query: 377 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVP 258
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVP 46
Score = 36.3 bits (80), Expect = 0.54
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1
Query: 249 LQMAGVQDCYTSARGSTGTLGNF 181
L MAG+ DCYTSARG T +L F
Sbjct: 50 LMMAGIDDCYTSARGCTASLDYF 72
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKPHTVP 345
F+ +VA+G+ +G++G +V AI+ AI +AKL+++ V RG W ++ G +++
Sbjct: 121 FRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGTNSLT 180
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVSA 267
K GK GSVTV + PAP+G G+ +A
Sbjct: 181 RKAEGKAGSVTVEIQPAPQGLGLAAA 206
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/58 (53%), Positives = 35/58 (60%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
+LL MA + DCYT ARG T TLGNF YLTPDLW++ TKSPY EF
Sbjct: 154 KLLMMA-IDDCYTLARGCTATLGNFAKATFDAISKIYSYLTPDLWKETVFTKSPYQEF 210
Score = 55.6 bits (128), Expect = 8e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = -2
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
KVTG+CGSV VRL APRGTGIVSAPVPK
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPK 153
Score = 46.4 bits (105), Expect = 5e-04
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFK 512
G SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 99 GASLKNEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 58.8 bits (136), Expect = 9e-08
Identities = 42/98 (42%), Positives = 55/98 (56%)
Frame = -2
Query: 548 ETNTCRTAHTFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 369
+T T + F+ V+I D + H+ L KCSK+ ATAI VL V +G +
Sbjct: 109 QTQTWLPSRPFKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETR 157
Query: 368 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
+G TV CKVTG+C SV + LIP R I+SAPVPK
Sbjct: 158 LGS-LTVSCKVTGQCVSVLICLIPPTR--NIISAPVPK 192
Score = 56.0 bits (129), Expect = 6e-07
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
+LL +A + DCYTSARG T TL NF YLTP+LW+ + KS Y EF
Sbjct: 193 KLLLLANIDDCYTSARGCTATLDNFDKATFNAISNTYSYLTPNLWKGLVFAKSTYLEF 250
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +3
Query: 336 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNNAL 515
+LA GV +DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G+ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 516 K 518
+
Sbjct: 78 E 78
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 56.4 bits (130), Expect = 5e-07
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALLPLATTTVILVWV*SAARK 449
G SL DEVLKIMPVQKQTRAGQRTRFKA + + + V SA R+
Sbjct: 74 GASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLVLSAPRR 121
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 54.8 bits (126), Expect = 1e-06
Identities = 32/99 (32%), Positives = 54/99 (54%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ +VA+GD NG IGLG +KEV A+ A + AK + + V I K +++P +
Sbjct: 93 FRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEAKKTAITV-------PITKDYSLPHR 145
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWLVYRTA 222
+ + G+ +V + PA GTG+V+ ++ Y+ A
Sbjct: 146 LDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQNA 184
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 54.0 bits (124), Expect = 3e-06
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKIGKPHTV 348
+F +V +GD GH+G G +KEV AI I AK +V+ P+ G TV
Sbjct: 49 SFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIRVPIVDG----------TV 98
Query: 347 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWLVYRTATPQLVVQLAP 192
P V G G+ + ++PA RGTG+V+ K F Y +++ P
Sbjct: 99 PHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGSTNP 150
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 53.6 bits (123), Expect = 3e-06
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKIGKPHTVP 345
F +V +GD NG +G+G+ +KEV AI A +A+ +++ PV G T+P
Sbjct: 39 FAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMITVPVENG----------TIP 88
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKS 252
++ G+ + V L PA GTG+++ VP+S
Sbjct: 89 HEIVGENSTSRVLLKPAGPGTGVIAGTVPRS 119
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 53.2 bits (122), Expect = 4e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALLPL 497
G SL DEVLKIMPV+K+TRAGQRTRFKA + +
Sbjct: 27 GASLKDEVLKIMPVRKETRAGQRTRFKAFVAI 58
Score = 46.8 bits (106), Expect = 4e-04
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = -1
Query: 495 RQQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLG*QDRKATHRPLQGHRQVWFC 316
R Y EV QG H R ++P + ++RLLG QDR+A HRPLQG R + C
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDRPLRLC 118
Query: 315 NSPADSCPSWYWN 277
+W+
Sbjct: 119 AGALHPRAQGHWH 131
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 53.2 bits (122), Expect = 4e-06
Identities = 29/84 (34%), Positives = 48/84 (57%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F + A+GD G IGLG+ + V AIR AI AK +++ + K +T+P
Sbjct: 30 SFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIVKISL--------KNNTIPH 81
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVS 270
++ GK G+ T+ + PA GTG+++
Sbjct: 82 EIAGKWGATTLWMAPAYEGTGVIA 105
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.4 bits (120), Expect = 8e-06
Identities = 30/83 (36%), Positives = 48/83 (57%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F +V +GD NGH+G G ++EV AI+ A+ AK +++ V +G T+P +
Sbjct: 34 FAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKNLISV------PIVGT--TIPHE 85
Query: 338 VTGKCGSVTVRLIPAPRGTGIVS 270
+ G+ GS V + PA GTG++S
Sbjct: 86 IHGQFGSGNVLMKPAAEGTGVIS 108
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F +V IGD NG +G G+ S EV AI+ AI A +++ V++ K ++
Sbjct: 71 FSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANNNLIKVKQ-------TKKGSIYHD 123
Query: 338 VTGKCGSVTVRLIPAPRGTGIVS 270
V G+ G+ V L+PAP GTGI++
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIA 146
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 51.6 bits (118), Expect = 1e-05
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F + IGD G++G G+ S EV AIR A+ AK ++ V K+ K T+ +
Sbjct: 100 FSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNNMYKV-------KMNKNFTLYHE 152
Query: 338 VTGKCGSVTVRLIPAPRGTGIVS 270
V GK G+ V + PAP+GTG+++
Sbjct: 153 VIGKHGAGKVLIKPAPKGTGVIA 175
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 50.0 bits (114), Expect = 4e-05
Identities = 27/96 (28%), Positives = 47/96 (48%)
Frame = -2
Query: 551 TETNTCRTAHTFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 372
T+ T + ++F+ ++ IG+ NG IG G K+ TA+R A + A+ +++P+ W
Sbjct: 176 TQVTTLQRINSFRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-- 233
Query: 371 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAP 264
HT P +TG+ + + P P G P
Sbjct: 234 -----HTCPIPLTGRFNDAEIEINPRPLGFNAYGNP 264
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/90 (33%), Positives = 46/90 (51%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F + +GD G +G+G + EV AIR +I AK ++ + K HT+P
Sbjct: 51 SFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHLVKINF--------KGHTIPH 102
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKS 252
+V GK S V L P+ GTGI++ +S
Sbjct: 103 EVIGKFKSARVILKPSTAGTGIIAGASVRS 132
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/84 (27%), Positives = 49/84 (58%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F+ ++ +GD NG +G+GV + +V A++ + A+ +++ V + K +++P
Sbjct: 87 SFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALIRV-------PLNKINSIPH 139
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVS 270
++G G+ V L PA GTG+++
Sbjct: 140 PMSGSSGAANVFLKPASGGTGVIA 163
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +1
Query: 256 LGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVCGFPILLPQ*PLRTGKTDN 411
LGT A+ +PVP GAG+ T TEP P+TL G +CG LLP P+ + DN
Sbjct: 37 LGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCGACCLLP--PVASTHRDN 85
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ IG+ NG +G+G + +EVATA++ A++ AK SV+ V + T+P +
Sbjct: 535 FRCTAIIGNGNGLVGVGCQAGREVATAVKRALVDAKKSVVRV-------PLVGAGTIPHR 587
Query: 338 VTGKCGSVTVRLIPAPRGTGIVS 270
V K + ++PA GTG+++
Sbjct: 588 VEAKFNAARCVMVPAADGTGVLA 610
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV--LPVRRGYWGNKIGKPHTV 348
+F+ + +G+ NG +GLG+ ++EV AIR AI AK ++ +PV G T+
Sbjct: 36 SFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIVEVPVING----------TI 85
Query: 347 PCKVTGKCGSVTVRLIPAPRGTGIVS 270
P +V G+ + V L PA GTGI++
Sbjct: 86 PHEVIGRQDASKVLLKPAAPGTGIIA 111
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ IV +GD G++G+G +KEV A++ + I A+ +++ V + K T P +
Sbjct: 169 FRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQV-------PMTKYSTFPHR 221
Query: 338 VTGKCGSVTVRLIPAPRGTGIVS 270
G G+ V L PA GTG+++
Sbjct: 222 SEGDYGAAKVMLRPASPGTGVIA 244
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ +V +GD G +G+GV +KEV A++ + A+ +++ V + K T P +
Sbjct: 206 FRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNIITV-------PMTKYLTFPHR 258
Query: 338 VTGKCGSVTVRLIPAPRGTGIVS 270
G G+ V L PA GTG+++
Sbjct: 259 ADGDYGAAKVMLRPASPGTGVIA 281
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 46.8 bits (106), Expect = 4e-04
Identities = 29/53 (54%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = -2
Query: 485 GHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHTVPCKVTG 330
GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP T PCK TG
Sbjct: 65 GHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-TYPCKRTG 114
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPY 91
+L+ A + CYTSAR T TLGN TP+LW++ TKSPY
Sbjct: 136 KLMLRASIDSCYTSARSYTVTLGNIAKATFDAVSKTSHS-TPNLWKEAVFTKSPY 189
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F +V +GD G +GLG + EV AI+ A+ AK +++ V + TVP +
Sbjct: 65 FAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLIRVPL--------RGTTVPHE 116
Query: 338 VTGKCGSVTVRLIPAPRGTGIVS 270
V G G+ V + PA GTG+++
Sbjct: 117 VIGHFGAGQVLIKPAKPGTGVIA 139
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 43.2 bits (97), Expect = 0.005
Identities = 29/83 (34%), Positives = 41/83 (49%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F +V +GD G IG +KE+ AI+ A+ AK + VR G T+P
Sbjct: 37 FSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAKKQL--VRIPITGT------TIPHD 88
Query: 338 VTGKCGSVTVRLIPAPRGTGIVS 270
G+ G+ L PA +GTGIV+
Sbjct: 89 TIGRFGASKFFLKPASKGTGIVA 111
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 41.9 bits (94), Expect = 0.011
Identities = 36/92 (39%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = -2
Query: 485 GHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK--PHTVPCKVTGKCGSV 315
GH GL CS EVATAI+ I + L S P+ R GN GK P P ++ S+
Sbjct: 98 GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSLPSVCPMQIRDYHSSM 155
Query: 314 TVRLIPAPRGTGIVSAPVPKSFFRWLVYRTAT 219
LI AP T I+S VPK+ L+ +T
Sbjct: 156 LACLITAP-STCIISGLVPKNLLLLLLLLAST 186
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 41.9 bits (94), Expect = 0.011
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLSVLPVRRGYWGNKIGKPHTVP 345
F +V +G+ G IG G+ + EV AI+ AI A L + + +G ++
Sbjct: 88 FSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLHTIEIHKG----------SIY 137
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVS 270
+V G+ G+ V L PAP+GTGI++
Sbjct: 138 HEVIGRSGASRVLLKPAPQGTGIIA 162
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 41.9 bits (94), Expect = 0.011
Identities = 23/84 (27%), Positives = 46/84 (54%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F+ +V IGD NG +G+GV +++V A + A + +++ V I K ++P
Sbjct: 47 SFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLIDV-------PITKSLSIPH 99
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVS 270
V G G+ + + P+ G+G+++
Sbjct: 100 AVIGDLGACKIIMRPSIEGSGVIA 123
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 41.1 bits (92), Expect = 0.019
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKIGKPHTVP 345
F +V +GD G +G G ++EV AI A AK +++ P+R G + G+
Sbjct: 81 FAALVVVGDGKGRVGFGHGKAREVPEAISKATAAAKKTMIRVPLREGRTLHHDGR----- 135
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWL 237
G+ G+ V L AP GTGI++ ++ F L
Sbjct: 136 ----GRFGAGLVYLRSAPSGTGIIAGGPMRAIFESL 167
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 40.7 bits (91), Expect = 0.025
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F IV +GD NG +G G+ + +V AIR + A+ + V + PH
Sbjct: 37 SFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKDMALVSL----TDVSIPH---- 88
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVS 270
+V G G+ V L PA GTG+++
Sbjct: 89 QVIGHYGAGRVFLRPASAGTGLIA 112
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 39.9 bits (89), Expect = 0.044
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LSVLPVRRGYWGNKIGKPHTVP 345
F +V +GD G +G G ++EV AIR A AK L +P+R G T+
Sbjct: 44 FAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLIFVPLRGG---------RTLH 94
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWL 237
V G+ G+ V L A GTGI++ ++ F L
Sbjct: 95 HDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETL 130
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 39.9 bits (89), Expect = 0.044
Identities = 29/113 (25%), Positives = 53/113 (46%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F + +GD G +G+G S+EV A++ A+ A+ ++ V N I T+
Sbjct: 43 FAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQRMVRV------NLIN--GTLHHS 94
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWLVYRTATPQLVVQLAPWEIL 180
V G+ G+ V + PA GTGI++ ++ F + + + P+ I+
Sbjct: 95 VIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGSTNPYNIV 147
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 39.9 bits (89), Expect = 0.044
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F +V +GD NG +G+G +KEV AI + A+ S V IG T P
Sbjct: 63 SFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFFRV------PLIGGTITHP- 115
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVS 270
V G+ + V L PA GTG+++
Sbjct: 116 -VQGEAAAGVVLLRPASPGTGVIA 138
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 39.9 bits (89), Expect = 0.044
Identities = 28/84 (33%), Positives = 41/84 (48%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F +V +GD NG +G+G S+EV AI + AK + V R T+
Sbjct: 66 SFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDAKKHMFSVPR--------VRGTITH 117
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVS 270
V G + TV L PA GTG+++
Sbjct: 118 PVQGHDAAGTVLLRPAAPGTGVIA 141
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 39.1 bits (87), Expect = 0.077
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F +V +GD G +G G + EV AI+ A+ A+ +++ V I TVP
Sbjct: 110 SFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV-------PIINKSTVPH 162
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVSA 267
+ K + V L PAP+G GI+++
Sbjct: 163 EQWAKFLASKVMLKPAPKGKGIIAS 187
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 38.7 bits (86), Expect = 0.10
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F +V +GD G +G G + EV+ AIR A+ +++ V T+P
Sbjct: 36 SFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNLVTVPM--------HGQTLPH 87
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVS 270
+V K G V L PA GTG+++
Sbjct: 88 EVEVKFGGARVLLRPASAGTGLIA 111
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 38.7 bits (86), Expect = 0.10
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKIGKPHTV 348
TF IV +G+ +G IG G+ + EV AI + AK +++ PV G T+
Sbjct: 37 TFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKNLIRVPVHNG----------TI 86
Query: 347 PCKVTGKCGSVTVRLIPAPRGTGI 276
P + G +V L PA GTG+
Sbjct: 87 PHEQAASYGGASVFLKPATTGTGV 110
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 38.3 bits (85), Expect = 0.13
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALLPL 497
G L D+VLK+M VQKQ +AG+R RFK ++ +
Sbjct: 160 GVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTI 191
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 38.3 bits (85), Expect = 0.13
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKIGKPHTV 348
+F +V +G+ +G +G G + EV +++ A A S++ P+ G ++
Sbjct: 42 SFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQASRSMIHVPLVEG----------SI 91
Query: 347 PCKVTGKCGSVTVRLIPAPRGTGIVS 270
P +V G+ G+ V LIPA GTGI++
Sbjct: 92 PHQVWGRYGAARVVLIPAGAGTGIIA 117
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.9 bits (84), Expect = 0.18
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = -2
Query: 509 IVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVT 333
+VAI G+ NG +GLG+ S E A A +LA ++ PVRR + N+ T+ VT
Sbjct: 364 VVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--YENR-----TIYGNVT 416
Query: 332 GKCGSVTVRLIPAPRGTGI 276
K V L+ P G G+
Sbjct: 417 SKISGTVVELMARPPGFGL 435
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 37.9 bits (84), Expect = 0.18
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -3
Query: 586 SLNDEVLKIMPVQKQTRAGQRTRFKA 509
+L +E L I PVQKQT AGQ+TRFKA
Sbjct: 104 TLKEEPLAIGPVQKQTCAGQKTRFKA 129
Score = 35.9 bits (79), Expect = 0.72
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 548 ETNTCRTAHT-FQGIVAIGDNNGHIGLGVKCSKEVATAIR 432
+ TC T F+ V +GD++ HIGLG K +KEV AI+
Sbjct: 116 QKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 35.9 bits (79), Expect = 0.72
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 399 TSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYW 280
+S KR+LG QDR TH P+Q R+ S S YW
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYW 208
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.23
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F + +GD NG +G+G + EV AI+ A+ ++ V K T+P
Sbjct: 92 SFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKRMVSVTL--------KGDTIPH 143
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVS 270
+V G V L PA GTG+++
Sbjct: 144 EVFGTHDGGKVLLRPAVTGTGLIA 167
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 37.5 bits (83), Expect = 0.23
Identities = 22/84 (26%), Positives = 42/84 (50%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F+ IV +G+ G +G+GV + +V A+R + K ++ V + K +++
Sbjct: 38 SFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLIEV-------PLTKSNSITH 90
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVS 270
G G V + PA GTG+++
Sbjct: 91 ITNGVSGGAKVVVRPAAPGTGVIA 114
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 37.1 bits (82), Expect = 0.31
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LSVLPVRRGYWGNKIGKPHTVP 345
F +V +G+ G IG+ +K+V AI+ A A+ L +P+R G T+
Sbjct: 33 FSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLIHVPLREG---------RTIH 83
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVS 270
V GK G+ + L AP+GTGI++
Sbjct: 84 HDVYGKDGAGKIILRSAPKGTGIIA 108
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 35.9 bits (79), Expect = 0.72
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F +V +G+ +G IG +V AI A A S+ V+R + HT+ +
Sbjct: 22 FTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYVQRF-------EDHTIYHE 74
Query: 338 VTGK-CGSVTVRLIPAPRGTGIVS 270
V GK C ++ V ++PAP G GIV+
Sbjct: 75 VRGKYCKTICV-MLPAPSGDGIVA 97
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 35.9 bits (79), Expect = 0.72
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNF 181
++L+ AG++D +TS+RGST TL NF
Sbjct: 13 KVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_A7SNX9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1056
Score = 35.5 bits (78), Expect = 0.95
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Frame = -2
Query: 539 TCRTAHTF----QGIV-AIGDNN-GHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 384
TC AHT QG+V A GDN+ G IGLG K ++V T + LAK+SV+ + G
Sbjct: 91 TCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACG 148
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 35.1 bits (77), Expect = 1.3
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 138 LTPDLWRDIPLTKSPYSEF 82
LTPDLW++ TKSPY EF
Sbjct: 139 LTPDLWKETVFTKSPYQEF 157
>UniRef50_Q5B9U1 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 965
Score = 34.3 bits (75), Expect = 2.2
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +3
Query: 192 RCQLNHELRCSSPVHQPSEEALRNWRRHNSSTTRGRNQPDCYRTTLAG 335
R L H +R SP+ QPS LR W NSS G + RT L G
Sbjct: 584 RLGLQHRVRFRSPIVQPSPLRLRQWA--NSSAESGPGLDELLRTQLNG 629
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 2.2
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = -2
Query: 509 IVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTG 330
+ G+ NG +G+G+ S E+ A + A A ++ PV R Y + T+ V G
Sbjct: 280 VTVAGNQNGLMGIGIAKSDEIIDACQQARARAVKNMQPVPR-Y------EKRTIFGDVEG 332
Query: 329 KCGSVTVRLIPAPRGTGI 276
K G+V ++L+ P G G+
Sbjct: 333 KVGAVQLKLMHRPPGFGL 350
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 33.9 bits (74), Expect = 2.9
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPC 342
+F ++ +GD G +G G + E+ AIR A+ +++ + G+ I PH V
Sbjct: 34 SFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKNLITI-ESLEGDSI--PHEVLV 90
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVS 270
G + L PA GTGIV+
Sbjct: 91 DQDG----AQLLLKPAKPGTGIVA 110
>UniRef50_Q1FIW5 Cluster: Chitinase precursor; n=1; Clostridium
phytofermentans ISDg|Rep: Chitinase precursor -
Clostridium phytofermentans ISDg
Length = 652
Score = 33.5 bits (73), Expect = 3.8
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -2
Query: 341 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKS----FFRWLVYRTATPQLVVQLAPWE 186
K+ G S+ + + P GTGIV A K+ F W +Y +A + V + PW+
Sbjct: 6 KIIGVILSLALLITMIPAGTGIVKAATGKNIVAYFPNWGIYNSAHRTMTVGMIPWD 61
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 33.1 bits (72), Expect = 5.0
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -1
Query: 249 LQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTK 100
L +A +QDCY AR + LGN+ YLT DLW + TK
Sbjct: 19 LLLASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLWTENVCTK 68
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 5.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 515 QGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 363
+ +V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_A6PUW4 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 262
Score = 33.1 bits (72), Expect = 5.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 210 ELRCSSPVHQPSEEALRNWRRHNSSTTRGRNQPDCYRTTLA 332
ELR S+ +H + EALR W R + T R + D TLA
Sbjct: 146 ELRLSAAIHADAPEALREWNRPDFLTVRPGRRADELLLTLA 186
>UniRef50_A7F3T0 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1934
Score = 33.1 bits (72), Expect = 5.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 117 PSTSQE*GRHMSWQWQHMWL*QNFPRCQLNHELRCSSPVHQPSEEALRNWRRHNSST 287
PST Q+ H+ ++H W+ PRC + ++ PV P + LRN T
Sbjct: 1703 PSTVQDNKSHLQ-AFRHFWVLAAEPRCLITRDIDTDQPVPIPLQITLRNGEEEERHT 1758
>UniRef50_A7S8R4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 304
Score = 32.7 bits (71), Expect = 6.7
Identities = 26/75 (34%), Positives = 32/75 (42%)
Frame = -2
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWLVYRTATPQLVVQLAPWEILLKPHM 165
CK GKC + VR RGTG V LV + P + V + L P +
Sbjct: 215 CKNGGKCVDMLVRAECDCRGTGYVGQHCQLK-KEILVNDSKEPNVTVGVTAHVRGLAPGL 273
Query: 164 LPLPRHMPTSLLTCG 120
PLP + LLTCG
Sbjct: 274 QPLPLTVIMVLLTCG 288
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 32.7 bits (71), Expect = 6.7
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = -2
Query: 500 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCG 321
+G+ NG IGLG S + A+ A ++A +++P+RR Y + T+ KV K
Sbjct: 278 VGNGNGRIGLGEAKSVDGQIAMHKARLMAIKNMVPIRR-Y------EDRTIYGKVKVKIA 330
Query: 320 SVTVRLIPAPRGTGI 276
V + P G G+
Sbjct: 331 GTVVEMAARPPGFGL 345
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 32.7 bits (71), Expect = 6.7
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKIGKPHTV 348
+F+ +GD G +G EV A A+ AK +++ P+R G T+
Sbjct: 32 SFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGAMIRFPLREG---------RTI 82
Query: 347 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWL 237
K G+ + + PAP GTGIV+ + F L
Sbjct: 83 HHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEML 119
>UniRef50_A2AKP6 Cluster: Novel protein; n=12; Murinae|Rep: Novel
protein - Mus musculus (Mouse)
Length = 982
Score = 32.3 bits (70), Expect = 8.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 372 QDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS 259
Q+++ HRPLQG Q D+CP W +C+ S
Sbjct: 945 QEKRLLHRPLQGSSQQGHTFHLEDACPHSPWVSLCSPS 982
>UniRef50_Q4P0S5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1700
Score = 32.3 bits (70), Expect = 8.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -2
Query: 377 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWLVYRTA 222
G+ GKP + +C ++ V ++ AP GT ++ AP+ + LV RT+
Sbjct: 1163 GSTAGKPRILEA-ANRRCTAIVVDIVRAPAGTNMIFAPMLGLHIKALVKRTS 1213
>UniRef50_A6SCI8 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1881
Score = 32.3 bits (70), Expect = 8.8
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 117 PSTSQE*GRHMSWQWQHMWL*QNFPRCQLNHELRCSSPVHQPSEEALRNWRRHNSST 287
PST Q+ H+ ++H W+ PRC + ++ PV P + LR+ + T
Sbjct: 1650 PSTVQDNKSHLQ-AFRHFWVLAAEPRCLITRDIDTDQPVPVPLQITLRDGKEEERHT 1705
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,771,954
Number of Sequences: 1657284
Number of extensions: 14212950
Number of successful extensions: 40474
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 38597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40419
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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