Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30544
(594 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0386 + 33555682-33556344,33557138-33557299 170 6e-43
07_01_0756 + 5819367-5820038,5820847-5821005 167 4e-42
07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871 73 1e-13
03_04_0238 - 19219040-19219218,19220296-19220350,19221606-192216... 38 0.006
07_03_0681 + 20659789-20659839,20660030-20660170,20661294-206613... 30 1.6
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 30 1.6
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 29 2.1
09_06_0275 + 21976990-21977140,21977239-21977388,21977775-219779... 29 3.7
09_02_0001 - 2857651-2857923,2858089-2858283 29 3.7
08_02_0529 + 18236782-18236807,18237166-18237229,18237334-182373... 29 3.7
01_06_0282 - 28160321-28160417,28160585-28160653,28161090-281611... 29 3.7
10_01_0133 + 1621574-1625779 28 6.5
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 28 6.5
12_02_0387 + 18453328-18453456,18453699-18453836,18454085-184541... 27 8.5
11_06_0640 + 25744048-25745021,25745128-25745273,25747870-257479... 27 8.5
06_01_0576 - 4073261-4073821,4073891-4074145 27 8.5
05_07_0050 + 27332855-27333009,27333725-27333790,27333971-273340... 27 8.5
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 170 bits (414), Expect = 6e-43
Identities = 74/93 (79%), Positives = 86/93 (92%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ V +GDNNGH+GLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWGNKIG+PHTVPCK
Sbjct: 107 FKAFVVVGDNNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNKIGQPHTVPCK 166
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRW 240
VTGKCGSVTVR++PAPRG+GIV+A VPK ++
Sbjct: 167 VTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQF 199
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
++LQ AG++D +TS+RGST TLGNF +LTPD WRD KSP+ E+
Sbjct: 195 KVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPDFWRDTKFVKSPFQEY 252
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -3
Query: 589 PSLNDEVLKIMPVQKQTRAGQRTRFKALL 503
P L DEV+KI PVQKQTRAGQRTRFKA +
Sbjct: 83 PGLKDEVMKITPVQKQTRAGQRTRFKAFV 111
>07_01_0756 + 5819367-5820038,5820847-5821005
Length = 276
Score = 167 bits (407), Expect = 4e-42
Identities = 73/93 (78%), Positives = 85/93 (91%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ V +GD +GH+GLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCK
Sbjct: 110 FKAFVVVGDGDGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 169
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRW 240
VTGKCGSVTVR++PAPRG+GIV+A VPK ++
Sbjct: 170 VTGKCGSVTVRMVPAPRGSGIVAAHVPKKVLQF 202
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
++LQ AG++D +TS+RGST TLGNF +LTPD WR+ K+P+ E+
Sbjct: 198 KVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPDFWRETRFIKTPFQEY 255
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = -3
Query: 589 PSLNDEVLKIMPVQKQTRAGQRTRFKALL 503
P L DEV+KI PVQKQTRAGQRTRFKA +
Sbjct: 86 PGLKDEVMKITPVQKQTRAGQRTRFKAFV 114
>07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871
Length = 233
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/90 (46%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = -2
Query: 506 VAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG-KPHTVPCKVTG 330
V +GD + HI LGVKC+K AT + GAIILA + G I KPHTV CKV
Sbjct: 3 VVVGDGDSHIELGVKCAK--ATTMSGAIILA---MFRCAEGATRETISRKPHTVSCKVAD 57
Query: 329 KCGSVTVRLIPAPRGTGIVSAPVPKSFFRW 240
K GSVTVR++ P G+ +V+ VPK ++
Sbjct: 58 KYGSVTVRMMLPPMGSSVVATRVPKKVLKF 87
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNF 181
++L+ AG++D +TS+RGST TL NF
Sbjct: 83 KVLKFAGIEDVFTSSRGSTKTLSNF 107
>03_04_0238 -
19219040-19219218,19220296-19220350,19221606-19221690,
19222068-19222798
Length = 349
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = -2
Query: 521 TFQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 393
+F+ IV +GD GH+G+GV +KEV AI A + + +++ V
Sbjct: 191 SFRAIVVVGDMKGHVGVGVGKAKEVTEAITKAAMNGRRNLVTV 233
>07_03_0681 +
20659789-20659839,20660030-20660170,20661294-20661399,
20661625-20661806,20661888-20662113,20662198-20662624,
20662844-20663189,20663271-20663849
Length = 685
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 336 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMT 485
DL D ++ + + + W NR +++ + G G ALH TNM+
Sbjct: 354 DLDEDNRGMAQIRDDLAGAMWNNRGMAEAGGGNGGHGGHHGALHWTTNMS 403
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 29.9 bits (64), Expect = 1.6
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -1
Query: 543 KHVPDSAHVSRHCCHWR 493
+H PD+A++S+HC WR
Sbjct: 1058 QHSPDTANMSKHCMSWR 1074
>09_06_0198 -
21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 345 RDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNN 509
R VW++D TPVT+S+ LS NS++ D + TN+T A G +
Sbjct: 105 RTVVWVADRGTPVTNSSSSAPTLSLTNSSNLVLSDADGGVRWTTNITDDAAGGGS 159
>09_06_0275 +
21976990-21977140,21977239-21977388,21977775-21977951,
21978073-21978161,21978259-21978323,21978445-21978547,
21979042-21979152,21979306-21979374,21979558-21979614
Length = 323
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -2
Query: 386 GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRW 240
G+ + +G VP + S+ + I + RG + AP+ + FRW
Sbjct: 6 GFLSSLLGGGEEVPPEPAATVRSILIYPIKSCRGISVPQAPITSTGFRW 54
>09_02_0001 - 2857651-2857923,2858089-2858283
Length = 155
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 335 TGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWLVY-RTATP 216
TG C + L+P R G + P+P S WL + T TP
Sbjct: 99 TGWCSASRRSLLPVVRHPGTIERPLPASLPTWLWHLYTLTP 139
>08_02_0529 +
18236782-18236807,18237166-18237229,18237334-18237383,
18237588-18237781,18238323-18238386,18238459-18238531,
18238882-18239005,18239491-18239578,18239649-18239714,
18239818-18239889,18239999-18240111,18240580-18240620,
18241782-18241913
Length = 368
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/36 (25%), Positives = 14/36 (38%)
Frame = +2
Query: 443 WRLPCCTSHPNQYDRCCRQWQQCLETCALSGTCLFL 550
W + H N+ CC W ++ + C FL
Sbjct: 290 WLIGLAVKHVNEAKLCCSSWPSDIDVVVMHHVCCFL 325
>01_06_0282 -
28160321-28160417,28160585-28160653,28161090-28161145,
28161650-28161741,28162314-28162398,28162512-28162628,
28162766-28162798,28163109-28163199,28163908-28163967,
28164115-28164180,28165238-28165430,28165665-28165821
Length = 371
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/71 (26%), Positives = 28/71 (39%)
Frame = -2
Query: 380 WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWLVYRTATPQLVVQ 201
W + KPHTV + G C + + P T +P W + +Q
Sbjct: 96 WTAWLYKPHTVSVLLAGACLLIWASGVLHPEITSSHDKVIPIKRGVWAMIAVFLAYCTLQ 155
Query: 200 LAPWEILLKPH 168
AP IL++PH
Sbjct: 156 -APSTILIRPH 165
>10_01_0133 + 1621574-1625779
Length = 1401
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 351 RPLQGHRQVWFCNSPADSCPSWYWNCVCASS*ELLQMAGV 232
+P R++ N +SCPSW+ + + E+L + GV
Sbjct: 848 QPPANLRELCIKNHKGNSCPSWFDSTISLKRIEVLHLHGV 887
>09_04_0076 + 14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 299 PAPRGTGIVSAPVPKSFFRWLVYRTATPQLVVQLAPWEILLKPHMLPLP 153
P G G+ + P+P+ FF+ + + QL +L P I+L P P
Sbjct: 1162 PVIGGMGVTAGPIPEDFFQNTI---PSQQLAARLPPPGIILSRIAQPAP 1207
>12_02_0387 +
18453328-18453456,18453699-18453836,18454085-18454144,
18461532-18462591,18463022-18463521
Length = 628
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 363 KATHRPLQGHRQVWFCNSPADSCPSW 286
K H L G + W+ N PA+S SW
Sbjct: 243 KVIHLALDGIARFWYFNLPANSIYSW 268
>11_06_0640 +
25744048-25745021,25745128-25745273,25747870-25747945,
25747996-25748230
Length = 476
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -3
Query: 550 QKQTRAGQRTRFKALLPLATTTVILVWV*SAARKSPLPFEALLSLLSCLFYQFEEVTGVT 371
++ R + T L LA IL+W+ + +PL L LLS F+ V VT
Sbjct: 54 ERDRRDREATLIMLTLLLALAMPILLWLSAGEAPAPLLVWRLSLLLSTYFFLCANVLFVT 113
Query: 370 RS 365
+S
Sbjct: 114 KS 115
>06_01_0576 - 4073261-4073821,4073891-4074145
Length = 271
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 347 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWL 237
P T G ++R A +G + P PK+FFR L
Sbjct: 198 PATATAPGGKASIRSRSARQGADAAAPPRPKTFFRSL 234
>05_07_0050 +
27332855-27333009,27333725-27333790,27333971-27334030,
27334425-27334515,27334893-27335073,27336037-27336128,
27336672-27336995
Length = 322
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/71 (25%), Positives = 27/71 (38%)
Frame = -2
Query: 380 WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKSFFRWLVYRTATPQLVVQ 201
W + KPHT+ + G C + P G S+ W + +Q
Sbjct: 31 WTAWLYKPHTISVLLVGACLLIWASGALDPEGASYHSSATSIKRGVWAMIAVFLAYCTLQ 90
Query: 200 LAPWEILLKPH 168
AP IL++PH
Sbjct: 91 -APSTILIRPH 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,580,226
Number of Sequences: 37544
Number of extensions: 424763
Number of successful extensions: 1175
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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