Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30544
(594 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 181 6e-46
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 181 6e-46
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 181 6e-46
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 181 6e-46
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 180 1e-45
AE014298-2417|AAF48618.2| 639|Drosophila melanogaster CG9906-PA... 31 1.2
BT028842-1|ABI34223.2| 274|Drosophila melanogaster RT01105p pro... 29 3.6
AE014297-2157|AAF55280.1| 279|Drosophila melanogaster CG5952-PA... 29 3.6
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr... 29 6.3
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot... 29 6.3
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB... 29 6.3
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA... 29 6.3
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 181 bits (441), Expect = 6e-46
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ VAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCK
Sbjct: 107 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 166
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
VTGKCGSV+VRLIPAPRGTGIVSAPVPK
Sbjct: 167 VTGKCGSVSVRLIPAPRGTGIVSAPVPK 194
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
+LL MAG++DCYTSARGSTGTLGNF YLTPDLW+++PL +PY +
Sbjct: 195 KLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALLPL 497
G SL DEVLKIMPVQKQTRAGQRTRFKA + +
Sbjct: 82 GSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 113
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 181 bits (441), Expect = 6e-46
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ VAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCK
Sbjct: 107 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 166
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
VTGKCGSV+VRLIPAPRGTGIVSAPVPK
Sbjct: 167 VTGKCGSVSVRLIPAPRGTGIVSAPVPK 194
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
+LL MAG++DCYTSARGSTGTLGNF YLTPDLW+++PL +PY +
Sbjct: 195 KLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALLPL 497
G SL DEVLKIMPVQKQTRAGQRTRFKA + +
Sbjct: 82 GSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 113
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 181 bits (441), Expect = 6e-46
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ VAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCK
Sbjct: 107 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 166
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
VTGKCGSV+VRLIPAPRGTGIVSAPVPK
Sbjct: 167 VTGKCGSVSVRLIPAPRGTGIVSAPVPK 194
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
+LL MAG++DCYTSARGSTGTLGNF YLTPDLW+++PL +PY +
Sbjct: 195 KLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALLPL 497
G SL DEVLKIMPVQKQTRAGQRTRFKA + +
Sbjct: 82 GSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 113
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 181 bits (441), Expect = 6e-46
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ VAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCK
Sbjct: 107 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 166
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
VTGKCGSV+VRLIPAPRGTGIVSAPVPK
Sbjct: 167 VTGKCGSVSVRLIPAPRGTGIVSAPVPK 194
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
+LL MAG++DCYTSARGSTGTLGNF YLTPDLW+++PL +PY +
Sbjct: 195 KLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALLPL 497
G SL DEVLKIMPVQKQTRAGQRTRFKA + +
Sbjct: 82 GSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 113
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 180 bits (438), Expect = 1e-45
Identities = 82/88 (93%), Positives = 86/88 (97%)
Frame = -2
Query: 518 FQGIVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 339
F+ VAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCK
Sbjct: 107 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 166
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPK 255
VTGKCGSV+VRLIPAPRGTGIVSAPVP+
Sbjct: 167 VTGKCGSVSVRLIPAPRGTGIVSAPVPR 194
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = -1
Query: 255 ELLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 82
+LL MAG++DCYTSARGSTGTLGNF YLTPDLW+++PL +PY +
Sbjct: 195 KLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
Score = 56.0 bits (129), Expect = 4e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = -3
Query: 592 GPSLNDEVLKIMPVQKQTRAGQRTRFKALLPL 497
G SL DEVLKIMPVQKQTRAGQRTRFKA + +
Sbjct: 82 GSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAI 113
>AE014298-2417|AAF48618.2| 639|Drosophila melanogaster CG9906-PA
protein.
Length = 639
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -2
Query: 344 CKVTGKCGSVTVRLIPAPRGTGIVSAPV---PKSFFRWLVYRTATPQLVVQLAPWEI 183
CK CG LIP P G SAP+ P + +W + A P L P+++
Sbjct: 352 CKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQM 408
>BT028842-1|ABI34223.2| 274|Drosophila melanogaster RT01105p
protein.
Length = 274
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 295 PLVVLELCLRQFLRASSDGWCTG-LLHLSSWFNW 197
PL +E CLR ++A W T L SW NW
Sbjct: 210 PLTYVEKCLRGEIKADRANWNTSDLTARLSWINW 243
>AE014297-2157|AAF55280.1| 279|Drosophila melanogaster CG5952-PA
protein.
Length = 279
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 295 PLVVLELCLRQFLRASSDGWCTG-LLHLSSWFNW 197
PL +E CLR ++A W T L SW NW
Sbjct: 215 PLTYVEKCLRGEIKADRANWNTSDLTARLSWINW 248
>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
protein.
Length = 1711
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 454 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 350
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon protein.
Length = 1695
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 454 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 350
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
isoform B protein.
Length = 1695
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 454 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 350
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
isoform A protein.
Length = 1711
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 454 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 350
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,144,409
Number of Sequences: 53049
Number of extensions: 709225
Number of successful extensions: 1823
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1823
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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