Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30543
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          44   5e-06
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          34   0.004
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   8.3  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.3  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 44.0 bits (99), Expect = 5e-06
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
 Frame = +2

Query: 251 IYHKFFKEADKNDYDCYVICTACLCAAGKSRDEPVRLRDAVNVAHN----SINRGAGPLE 418
           ++ +FF       +       +C+C A K  + P R+RD +NV H+       +   P+ 
Sbjct: 105 LFQRFFYSKSFVRHSMEATAMSCICLASKIEEAPRRIRDVINVFHHIKQVRSQKPLLPMI 164

Query: 419 LGDEYWSWRSAVAQAELLVLRLLGF 493
           L   Y + +S V +AE  VL+ LGF
Sbjct: 165 LDQHYINLKSQVIKAERRVLKELGF 189


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 34.3 bits (75), Expect = 0.004
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 251 IYHKFFKEADKNDYDCYVICTACLCAAGKSRDEPVRLRDAVNVAHN 388
           ++ +FF       +       +C+C A K  + P R+RD +NV H+
Sbjct: 105 LFQRFFYSKSFVRHSMEATAMSCICLASKIEEAPRRIRDVINVFHH 150


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 323 TNKQCRLRSSRNHSCR 276
           +N+ CR  + RNHS R
Sbjct: 148 SNRNCRTAARRNHSSR 163


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 775 FCRSL*KLNTMQHHHLVWMP 716
           + RS+  L  + H HL W+P
Sbjct: 746 YSRSIKHLGVLVHDHLSWIP 765


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,722
Number of Sequences: 2352
Number of extensions: 15756
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)