Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30542
         (426 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54ER4 Cluster: Protein kinase, Atypical group; n=1; Di...    33   3.3  
UniRef50_Q8VAX0 Cluster: Wsv253; n=1; Shrimp white spot syndrome...    32   4.3  
UniRef50_A5K8N4 Cluster: Putative uncharacterized protein; n=1; ...    32   4.3  
UniRef50_Q6F0Q7 Cluster: Putative chitin deacetylase; n=1; Mesop...    31   7.5  
UniRef50_Q0UFI8 Cluster: Putative uncharacterized protein; n=1; ...    31   7.5  

>UniRef50_Q54ER4 Cluster: Protein kinase, Atypical group; n=1;
            Dictyostelium discoideum AX4|Rep: Protein kinase,
            Atypical group - Dictyostelium discoideum AX4
          Length = 3157

 Score = 32.7 bits (71), Expect = 3.3
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +2

Query: 146  Y*TFNVNFFYFERIVVGNKNERKGHTQ*REKHNPEKEHKGK*LLSNWDTNLK 301
            Y   + N    E + + N N   G+      +N +K+   K LLS WD  LK
Sbjct: 2337 YKLIHYNVIPIENVTITNNNNNIGNNNNSNNNNVQKQQMLKKLLSEWDDRLK 2388


>UniRef50_Q8VAX0 Cluster: Wsv253; n=1; Shrimp white spot syndrome
           virus|Rep: Wsv253 - White spot syndrome virus (WSSV)
          Length = 104

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 268 FSFMFLFRIMFLPSLCMTFSFIFVAHNNPLEVKKI 164
           F F+F F   FLPSL +T+  I V +++P     I
Sbjct: 21  FIFIFFFCAAFLPSLVLTYKVIIVCNSSPYRKNSI 55


>UniRef50_A5K8N4 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1915

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -2

Query: 329  IKTTRAFLHFLNLYPNCSVIIFLYVPFQDYVSPFTVYDLFFHFCCPQQS 183
            +K     L+    Y NCS    L   F D   P+   D+FF+F C Q+S
Sbjct: 1577 LKNVTYILNNYKQYKNCSTFFLLL--FCDIFLPYASSDIFFYFKCIQRS 1623


>UniRef50_Q6F0Q7 Cluster: Putative chitin deacetylase; n=1;
           Mesoplasma florum|Rep: Putative chitin deacetylase -
           Mesoplasma florum (Acholeplasma florum)
          Length = 247

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -3

Query: 244 IMFLPSLCMTFSFIFVAHNNPLEVKKINVKRSV 146
           I FL  +C  FSFI ++HN   EV KI  K  V
Sbjct: 10  IFFLMLICFIFSFISMSHNK--EVNKIKTKEKV 40


>UniRef50_Q0UFI8 Cluster: Putative uncharacterized protein; n=1;
            Phaeosphaeria nodorum|Rep: Putative uncharacterized
            protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 1614

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -3

Query: 238  FLPSLC-MTFSFIFVAHNNPLEVKKINV 158
            +LP L   TF F+  AHN P++V K+NV
Sbjct: 1358 YLPGLLNFTFDFLGHAHNKPVDVSKLNV 1385


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,850,783
Number of Sequences: 1657284
Number of extensions: 5295171
Number of successful extensions: 11499
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11494
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)