Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30542
         (426 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.40 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   2.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   3.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   5.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   5.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    20   8.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   8.7  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 0.40
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 269 IFLYVPFQDYVSPFTVYDLFFHFCC 195
           + L+V F  Y+  FT    FF  CC
Sbjct: 58  VTLHVCFNSYMYAFTHIFFFFAICC 82


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 168 FFTSRGLLWATKMKEKVIHSEGRN 239
           FFTS G+ +   MK  +   +GR+
Sbjct: 174 FFTSLGIAFDNIMKNLICEIDGRH 197


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 199 VAHNNPLEVKKIN 161
           ++H+NPLE  K+N
Sbjct: 1   MSHSNPLEAFKLN 13


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
          protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 10 CRHVSYEFSSPYP 48
          C H++Y F   YP
Sbjct: 53 CTHINYAFLGVYP 65


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 266 FLYVPFQDYVSPFTVYDLFFH 204
           FL +     + PF +Y +F H
Sbjct: 44  FLNITASAVLLPFAIYHIFMH 64


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 214 FSFIFVAHNNPLEVKKINVKRSVTTVQQKL 125
           F+ I +  +    VKKIN+K ++   +Q L
Sbjct: 604 FNVIGIGRSPDQNVKKINLKHALDLDRQGL 633


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 144 VTERLTLIFFTSRGLLWATKMKEKVI 221
           +TER   I+F +R + +  + K KV+
Sbjct: 124 LTERQIKIWFQNRRMKFKKEEKNKVV 149


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 144 VTERLTLIFFTSRGLLWATKMKEKVI 221
           +TER   I+F +R + +  + K KV+
Sbjct: 144 LTERQIKIWFQNRRMKFKKEEKNKVV 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,313
Number of Sequences: 336
Number of extensions: 1543
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)